RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 IGKV1D-17A0A075B6S4 117 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 A0A1B0GU03 582 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 MSGN1A6NI15 193 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 CDS2O95674 445 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 CD37P11049 281 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 HSPE1P61604 102 aaKnown RBP7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 HABP2Q14520 560 aaPredicted RBP7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 HIST2H3AQ71DI3 136 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 DMRTA2Q96SC8 542 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 SLC25A33Q9BSK2 321 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 C5orf66Q9H5L9 145 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 ZNF107Q9UII5 783 aaPredicted RBP7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 NAGKQ9UJ70 344 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 SAA2-SAA4A0A096LPE2 208 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 H0Y980 276 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 SAA2P0DJI9 122 aaPredicted RBP7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 FGF8P55075 233 aaPredicted RBP7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 HIST1H3AP68431 136 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 CR1LQ2VPA4 569 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 RPL7L1Q6DKI1 246 aaKnown RBP7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 RBPMS2Q6ZRY4 209 aaKnown RBP7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 SSX7Q7RTT5 188 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 FAM169BQ8N8A8 192 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 TRANK1O15050 2925 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 IGKV1D-8A0A087WSZ0 117 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 KIAA1324LA8MWY0 1029 aaPredicted RBP7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 MBP02144 154 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 MSMBP08118 114 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 S100A2P29034 98 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 PAFAH1B2P68402 229 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 MORN2Q502X0 79 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 TP53RKQ96S44 253 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 PFDN5Q99471 154 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 GON7Q9BXV9 100 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 GHITMQ9H3K2 345 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 TCF19Q9Y242 345 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 MMP24Q9Y5R2 645 aa7.03□□□□□ -1.28
CRNKL1-202ENST00000377340 IGKV1D-13A0A0B4J2D9 117 aa7.02□□□□□ -1.28
CRNKL1-202ENST00000377340 NPIPB11E5RHQ5 1161 aa7.02□□□□□ -1.28
CRNKL1-202ENST00000377340 EIF3GO75821 320 aaKnown RBP eCLIP7.02□□□□□ -1.28
CRNKL1-202ENST00000377340 ALX3O95076 343 aa7.02□□□□□ -1.28
CRNKL1-202ENST00000377340 MELTFP08582 738 aa7.02□□□□□ -1.28
CRNKL1-202ENST00000377340 IGKV1-13P0DP09 117 aa7.02□□□□□ -1.28
CRNKL1-202ENST00000377340 NHLH2Q02577 135 aa7.02□□□□□ -1.28
CRNKL1-202ENST00000377340 RPEL1Q2QD12 228 aa7.02□□□□□ -1.28
CRNKL1-202ENST00000377340 ANKRD55Q3KP44 614 aa7.02□□□□□ -1.28
CRNKL1-202ENST00000377340 PRSS54Q6PEW0 395 aa7.02□□□□□ -1.28
CRNKL1-202ENST00000377340 DUX4L9Q6RFH8 374 aaPredicted RBP7.02□□□□□ -1.28
CRNKL1-202ENST00000377340 CGB1A6NKQ9 187 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 MOSP00540 346 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 SPP1P10451 314 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 RAG2P55895 527 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 OR5I1Q13606 314 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 RSPO1Q2MKA7 263 aaPredicted RBP7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 SMIM15Q7Z3B0 74 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 JMJD8Q96S16 334 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 LIME1Q9H400 295 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 SLA2Q9H6Q3 261 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 BEX4Q9NWD9 120 aaPredicted RBP7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 SELENOKQ9Y6D0 94 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 CGAP01215 116 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 SLC25A5P05141 298 aaKnown RBP7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 OR10J1P30954 320 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 ZNF137PP52743 207 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 B2MP61769 119 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 UBE2L3P68036 154 aaKnown RBP7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 TIGITQ495A1 244 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 RUSC1-AS1Q66K80 236 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 FOXL2NBQ6ZUU3 175 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 LINC01356Q8N9X3 169 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 OR4X2Q8NGF9 303 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 SLC25A28Q96A46 364 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 ZNRD1Q9P1U0 126 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 F8P00451 2351 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 IGHV2-26A0A0B4J1V2 119 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 IGHV1-8P0DP01 117 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 ZP1P60852 638 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 SPCS3P61009 180 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 ZNF146Q15072 292 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 ZNF497Q6ZNH5 498 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 ZNF329Q86UD4 541 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 RTN4RL2Q86UN3 420 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 ZNF485Q8NCK3 441 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 STXBP6Q8NFX7 210 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 OR4P4Q8NGL7 312 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 OR10G4Q8NGN3 311 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 OR10G9Q8NGN4 311 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 OR10G7Q8NGN6 311 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 SOSTQ9BQB4 213 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 REG4Q9BYZ8 158 aa7.02□□□□□ -1.29
CRNKL1-202ENST00000377340 MDFIC2A0A1B0GVS7 189 aa7.01□□□□□ -1.29
CRNKL1-202ENST00000377340 ATP5G2Q06055 141 aa7.01□□□□□ -1.29
CRNKL1-202ENST00000377340 NSUN5P1Q3KNT7 163 aa7.01□□□□□ -1.29
CRNKL1-202ENST00000377340 FAM209BQ5JX69 171 aa7.01□□□□□ -1.29
CRNKL1-202ENST00000377340 KDF1Q8NAX2 398 aaPredicted RBP7.01□□□□□ -1.29
CRNKL1-202ENST00000377340 NIPSNAP3BQ9BS92 247 aa7.01□□□□□ -1.29
CRNKL1-202ENST00000377340 PRSS22Q9GZN4 317 aa7.01□□□□□ -1.29
CRNKL1-202ENST00000377340 URGCP-MRPS24S4R325 110 aa7.01□□□□□ -1.29
CRNKL1-202ENST00000377340 IGHV3OR16-12A0A075B7B8 117 aa7.01□□□□□ -1.29
CRNKL1-202ENST00000377340 A0A0A6YYD4 124 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms