RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 CD1BP29016 333 aa8.4□□□□□ -1.06
PDPN-203ENST00000376061 NKX2-1P43699 371 aaPredicted RBP8.4□□□□□ -1.06
PDPN-203ENST00000376061 OR2B8PP59922 312 aa8.4□□□□□ -1.06
PDPN-203ENST00000376061 FGL1Q08830 312 aa8.4□□□□□ -1.06
PDPN-203ENST00000376061 FBLN7Q53RD9 439 aa8.4□□□□□ -1.06
PDPN-203ENST00000376061 CXorf66Q5JRM2 361 aaPredicted RBP8.4□□□□□ -1.06
PDPN-203ENST00000376061 FOXRED2Q8IWF2 684 aa8.4□□□□□ -1.06
PDPN-203ENST00000376061 FAM71E2Q8N5Q1 922 aa8.4□□□□□ -1.06
PDPN-203ENST00000376061 RITA1Q96K30 269 aa8.4□□□□□ -1.06
PDPN-203ENST00000376061 HYLS1Q96M11 299 aa8.4□□□□□ -1.06
PDPN-203ENST00000376061 OR5AC2Q9NZP5 309 aa8.4□□□□□ -1.06
PDPN-203ENST00000376061 RCL1Q9Y2P8 373 aaKnown RBP8.4□□□□□ -1.06
PDPN-203ENST00000376061 POMT1Q9Y6A1 747 aa8.4□□□□□ -1.06
PDPN-203ENST00000376061 BAHCC1Q9P281 2608 aa8.4□□□□□ -1.06
PDPN-203ENST00000376061 OTOGQ6ZRI0 2925 aa8.4□□□□□ -1.06
PDPN-203ENST00000376061 NOTCH2Q04721 2471 aa8.4□□□□□ -1.07
PDPN-203ENST00000376061 ZNF469Q96JG9 3925 aaPredicted RBP8.39□□□□□ -1.07
PDPN-203ENST00000376061 TRAV3A0A0B4J244 114 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 A0A0U1RQK1 487 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 ST8SIA3O43173 380 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 DEDDO75618 318 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 KBTBD11O94819 623 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 IL6RP08887 468 aaPredicted RBP8.39□□□□□ -1.07
PDPN-203ENST00000376061 PET100P0DJ07 73 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 SLC25A4P12235 298 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 UBE2KP61086 200 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 RPS16P62249 146 aaKnown RBP8.39□□□□□ -1.07
PDPN-203ENST00000376061 RELBQ01201 579 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 ID3Q02535 119 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 KRTAP1-1Q07627 177 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 AARDQ4LEZ3 155 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 C11orf87Q6NUJ2 197 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 PRSS54Q6PEW0 395 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 PUSL1Q8N0Z8 303 aaKnown RBP8.39□□□□□ -1.07
PDPN-203ENST00000376061 AIFM2Q9BRQ8 373 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 RNF126Q9BV68 326 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 MAGT1Q9H0U3 335 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.39□□□□□ -1.07
PDPN-203ENST00000376061 BET1LQ9NYM9 111 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 ITGB1BP2Q9UKP3 347 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 NSG2Q9Y328 171 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 LSM5Q9Y4Y9 91 aaKnown RBP8.39□□□□□ -1.07
PDPN-203ENST00000376061 TLN2Q9Y4G6 2542 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 CSPG4Q6UVK1 2322 aa8.39□□□□□ -1.07
PDPN-203ENST00000376061 TNCP24821 2201 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 C15orf61A6NNL5 157 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 FAM90A26D6RGX4 464 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 UPK2O00526 184 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 SLC25A17O43808 307 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 SSSCA1O60232 199 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 IGKV1D-33P01593 117 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 IGKV1-33P01594 117 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 SNRNP70P08621 437 aaKnown RBP8.38□□□□□ -1.07
PDPN-203ENST00000376061 LYL1P12980 280 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 CD24P25063 80 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 CNTFRP26992 372 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 ARHGDIBP52566 201 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 POLR2GP62487 172 aaKnown RBP eCLIP8.38□□□□□ -1.07
PDPN-203ENST00000376061 TNFRSF9Q07011 255 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 C9orf62Q8N4C0 152 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 THAP6Q8TBB0 222 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 DCUN1D4Q92564 292 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 TSNAXQ99598 290 aaKnown RBP8.38□□□□□ -1.07
PDPN-203ENST00000376061 QTRT1Q9BXR0 403 aaKnown RBP8.38□□□□□ -1.07
PDPN-203ENST00000376061 C11orf1Q9H5F2 150 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 TPSG1Q9NRR2 321 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 ZFP57Q9NU63 452 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 TMEM14BQ9NUH8 114 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 HSPB7Q9UBY9 170 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 FOXA2Q9Y261 457 aaPredicted RBP8.38□□□□□ -1.07
PDPN-203ENST00000376061 SOX21Q9Y651 276 aaPredicted RBP8.38□□□□□ -1.07
PDPN-203ENST00000376061 SVEP1Q4LDE5 3571 aa8.38□□□□□ -1.07
PDPN-203ENST00000376061 HMSDA8MTL9 139 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 ARPC5O15511 151 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 RBMXL2O75526 392 aaKnown RBP8.37□□□□□ -1.07
PDPN-203ENST00000376061 SNAPC5O75971 98 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 SPDEFO95238 335 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 MOSP00540 346 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 LGALS7P47929 136 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 EBI3Q14213 229 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 PSG5Q15238 335 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 VMA21Q3ZAQ7 101 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 FAM120AOSQ5T036 256 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 LAMTOR1Q6IAA8 161 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 TMEM65Q6PI78 240 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 C16orf54Q6UWD8 224 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 Q8N6K4 173 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 OR2T10Q8NGZ9 312 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 OR4A16Q8NH70 328 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 OR4A5Q8NH83 315 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 VSTM2AQ8TAG5 236 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 TMEM167AQ8TBQ9 72 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 RNF5Q99942 180 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 PRNDQ9UKY0 176 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 TNFSF18Q9UNG2 199 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 FLNBO75369 2602 aaKnown RBP8.37□□□□□ -1.07
PDPN-203ENST00000376061 ACANP16112 2415 aa8.37□□□□□ -1.07
PDPN-203ENST00000376061 RNF222A6NCQ9 220 aa8.36□□□□□ -1.07
PDPN-203ENST00000376061 E5RGE8 158 aa8.36□□□□□ -1.07
PDPN-203ENST00000376061 WRBO00258 174 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms