RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 BPIFA4PQ86YQ2 179 aa11.52□□□□□ -0.56
C9orf47-203ENST00000375851 FGFBP3Q8TAT2 258 aa11.52□□□□□ -0.56
C9orf47-203ENST00000375851 CADP27708 2225 aa11.52□□□□□ -0.56
C9orf47-203ENST00000375851 PRSS1P07477 247 aa11.52□□□□□ -0.57
C9orf47-203ENST00000375851 C8orf88P0DMB2 117 aa11.52□□□□□ -0.57
C9orf47-203ENST00000375851 PF4V1P10720 104 aa11.52□□□□□ -0.57
C9orf47-203ENST00000375851 COX6B1P14854 86 aa11.52□□□□□ -0.57
C9orf47-203ENST00000375851 COMPP49747 757 aaPredicted RBP11.52□□□□□ -0.57
C9orf47-203ENST00000375851 RBM14Q96PK6 669 aaKnown RBP11.52□□□□□ -0.57
C9orf47-203ENST00000375851 ZNF407Q9C0G0 2248 aa11.52□□□□□ -0.57
C9orf47-203ENST00000375851 HTN1P15515 57 aa11.52□□□□□ -0.57
C9orf47-203ENST00000375851 FOXG1P55316 489 aaPredicted RBP11.52□□□□□ -0.57
C9orf47-203ENST00000375851 C17orf98A8MV24 154 aa11.52□□□□□ -0.57
C9orf47-203ENST00000375851 PTBP3O95758 552 aaKnown RBP11.52□□□□□ -0.57
C9orf47-203ENST00000375851 CLPSP04118 112 aa11.52□□□□□ -0.57
C9orf47-203ENST00000375851 FAM3BP58499 235 aaPredicted RBP11.52□□□□□ -0.57
C9orf47-203ENST00000375851 GBGT1Q8N5D6 347 aa11.52□□□□□ -0.57
C9orf47-203ENST00000375851 FAM89BQ8N5H3 189 aa11.52□□□□□ -0.57
C9orf47-203ENST00000375851 FER1L5A0AVI2 2057 aa11.52□□□□□ -0.57
C9orf47-203ENST00000375851 HEATR1Q9H583 2144 aaKnown RBP11.51□□□□□ -0.57
C9orf47-203ENST00000375851 A8MWL6 223 aa11.51□□□□□ -0.57
C9orf47-203ENST00000375851 ATP5J2P56134 94 aa11.51□□□□□ -0.57
C9orf47-203ENST00000375851 NPIPB3Q92617 1050 aa11.51□□□□□ -0.57
C9orf47-203ENST00000375851 SEMA5BQ9P283 1151 aa11.51□□□□□ -0.57
C9orf47-203ENST00000375851 SS18L1O75177 396 aaPredicted RBP11.51□□□□□ -0.57
C9orf47-203ENST00000375851 ZNF146Q15072 292 aa11.51□□□□□ -0.57
C9orf47-203ENST00000375851 ELOBQ15370 118 aa11.51□□□□□ -0.57
C9orf47-203ENST00000375851 C1QTNF12Q5T7M4 302 aa11.51□□□□□ -0.57
C9orf47-203ENST00000375851 WDFY1Q8IWB7 410 aa11.51□□□□□ -0.57
C9orf47-203ENST00000375851 PHF3Q92576 2039 aaKnown RBP11.51□□□□□ -0.57
C9orf47-203ENST00000375851 TRBV23-1A0A0A0MS06 115 aa11.51□□□□□ -0.57
C9orf47-203ENST00000375851 ZCCHC14Q8WYQ9 949 aaKnown RBP11.51□□□□□ -0.57
C9orf47-203ENST00000375851 APCSP02743 223 aa11.51□□□□□ -0.57
C9orf47-203ENST00000375851 ARL14EPLP0DKL9 152 aa11.51□□□□□ -0.57
C9orf47-203ENST00000375851 GGNQ86UU5 652 aa11.51□□□□□ -0.57
C9orf47-203ENST00000375851 PLPPR1Q8TBJ4 325 aa11.51□□□□□ -0.57
C9orf47-203ENST00000375851 EAF1Q96JC9 268 aaPredicted RBP11.51□□□□□ -0.57
C9orf47-203ENST00000375851 CRYGSP22914 178 aa11.5□□□□□ -0.57
C9orf47-203ENST00000375851 MFAP4P55083 255 aa11.5□□□□□ -0.57
C9orf47-203ENST00000375851 PSMG3Q9BT73 122 aaPredicted RBP11.5□□□□□ -0.57
C9orf47-203ENST00000375851 SPRR3Q9UBC9 169 aa11.5□□□□□ -0.57
C9orf47-203ENST00000375851 IGKV3D-15A0A087WSY6 115 aa11.5□□□□□ -0.57
C9orf47-203ENST00000375851 RNF222A6NCQ9 220 aa11.5□□□□□ -0.57
C9orf47-203ENST00000375851 PAFAH1B2P68402 229 aa11.5□□□□□ -0.57
C9orf47-203ENST00000375851 NABP2Q9BQ15 211 aa11.5□□□□□ -0.57
C9orf47-203ENST00000375851 TMEM191AQ9H0A3 160 aa11.5□□□□□ -0.57
C9orf47-203ENST00000375851 BMPR1BO00238 502 aa11.5□□□□□ -0.57
C9orf47-203ENST00000375851 FCGR2BP31994 310 aaPredicted RBP11.5□□□□□ -0.57
C9orf47-203ENST00000375851 IBA57Q5T440 356 aaKnown RBP11.5□□□□□ -0.57
C9orf47-203ENST00000375851 OR51G1Q8NGK1 321 aa11.5□□□□□ -0.57
C9orf47-203ENST00000375851 NOTCH3Q9UM47 2321 aa11.5□□□□□ -0.57
C9orf47-203ENST00000375851 KBTBD11-OT1A0A1B0GTJ5 212 aa11.49□□□□□ -0.57
C9orf47-203ENST00000375851 TRGC2P03986 189 aa11.49□□□□□ -0.57
C9orf47-203ENST00000375851 SMIM6P0DI80 62 aa11.49□□□□□ -0.57
C9orf47-203ENST00000375851 PPOXP50336 477 aa11.49□□□□□ -0.57
C9orf47-203ENST00000375851 HOXA4Q00056 320 aaPredicted RBP11.49□□□□□ -0.57
C9orf47-203ENST00000375851 PCSK4Q6UW60 755 aa11.49□□□□□ -0.57
C9orf47-203ENST00000375851 C17orf100A8MU93 164 aa11.49□□□□□ -0.57
C9orf47-203ENST00000375851 KIAA2026Q5HYC2 2103 aa11.49□□□□□ -0.57
C9orf47-203ENST00000375851 USF3Q68DE3 2245 aa11.49□□□□□ -0.57
C9orf47-203ENST00000375851 TRBV6-7A0A0A0MS04 114 aa11.49□□□□□ -0.57
C9orf47-203ENST00000375851 CA2P00918 260 aa11.49□□□□□ -0.57
C9orf47-203ENST00000375851 ATP5IP56385 69 aaPredicted RBP11.49□□□□□ -0.57
C9orf47-203ENST00000375851 TMEM116Q8NCL8 245 aa11.49□□□□□ -0.57
C9orf47-203ENST00000375851 OSR1Q8TAX0 266 aaPredicted RBP11.49□□□□□ -0.57
C9orf47-203ENST00000375851 PLXNA3P51805 1871 aa11.49□□□□□ -0.57
C9orf47-203ENST00000375851 MED13LQ71F56 2210 aa11.49□□□□□ -0.57
C9orf47-203ENST00000375851 TM4SF5O14894 197 aa11.49□□□□□ -0.57
C9orf47-203ENST00000375851 RCC1LQ96I51 464 aaKnown RBP11.49□□□□□ -0.57
C9orf47-203ENST00000375851 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.49□□□□□ -0.57
C9orf47-203ENST00000375851 COL4A6Q14031 1691 aa11.49□□□□□ -0.57
C9orf47-203ENST00000375851 TRAV14DV4A0A0A6YYC5 116 aa11.48□□□□□ -0.57
C9orf47-203ENST00000375851 IGKV1D-13A0A0B4J2D9 117 aa11.48□□□□□ -0.57
C9orf47-203ENST00000375851 IGKV1-13P0DP09 117 aa11.48□□□□□ -0.57
C9orf47-203ENST00000375851 NABP1Q96AH0 204 aa11.48□□□□□ -0.57
C9orf47-203ENST00000375851 CHODLQ9H9P2 273 aa11.48□□□□□ -0.57
C9orf47-203ENST00000375851 CRYBB3P26998 211 aa11.48□□□□□ -0.57
C9orf47-203ENST00000375851 FXYD3Q14802 87 aa11.48□□□□□ -0.57
C9orf47-203ENST00000375851 DGAT2L7PQ6IED9 249 aa11.48□□□□□ -0.57
C9orf47-203ENST00000375851 GATAD1Q8WUU5 269 aa11.48□□□□□ -0.57
C9orf47-203ENST00000375851 NUBP1P53384 320 aa11.48□□□□□ -0.57
C9orf47-203ENST00000375851 STPG3Q8N7X2 389 aa11.48□□□□□ -0.57
C9orf47-203ENST00000375851 SPSB4Q96A44 273 aa11.48□□□□□ -0.57
C9orf47-203ENST00000375851 PIMREGQ9BSJ6 248 aa11.48□□□□□ -0.57
C9orf47-203ENST00000375851 PEAR1Q5VY43 1037 aaPredicted RBP11.48□□□□□ -0.57
C9orf47-203ENST00000375851 RBPMS2Q6ZRY4 209 aaKnown RBP11.48□□□□□ -0.57
C9orf47-203ENST00000375851 FAM90A1Q86YD7 464 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 BMPERQ8N8U9 685 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 DYNLRB2Q8TF09 96 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 PARLQ9H300 379 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 OR51M1Q9H341 326 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 A0A0A6YYD4 124 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 Q0VFX4 171 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 TMEM78Q5T7P6 136 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 SPANXN1Q5VSR9 72 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 METTL26Q96S19 204 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 C19orf24Q9BVV8 132 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 GSX1Q9H4S2 264 aaPredicted RBP11.47□□□□□ -0.57
C9orf47-203ENST00000375851 IGKV1-12A0A0C4DH73 117 aa11.47□□□□□ -0.57
C9orf47-203ENST00000375851 IGKV1D-12P01611 117 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms