RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 ZNF705BP0CI00 300 aaPredicted RBP12.6□□□□□ -0.39
MSH5-203ENST00000375750 SPCS3P61009 180 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 ATP6V1FQ16864 119 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 ACOT6Q3I5F7 207 aaPredicted RBP12.6□□□□□ -0.39
MSH5-203ENST00000375750 MIC13Q5XKP0 118 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 KCNIP4Q6PIL6 250 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 CLCF1Q9UBD9 225 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 HCFC1P51610 2035 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 TRAV3A0A0B4J244 114 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 PIGBOS1A0A0B4J2F0 54 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 MARCH11A6NNE9 402 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 F2Z2F3 143 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 ARL14EPLP0DKL9 152 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 HLA-DRB5Q30154 266 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 UTF1Q5T230 341 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 SSMEM1Q8WWF3 244 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 GMPPAQ96IJ6 420 aaPredicted RBP12.6□□□□□ -0.39
MSH5-203ENST00000375750 POLDIP2Q9Y2S7 368 aa12.6□□□□□ -0.39
MSH5-203ENST00000375750 CLDN14O95500 239 aa12.59□□□□□ -0.39
MSH5-203ENST00000375750 CBLN1P23435 193 aa12.59□□□□□ -0.39
MSH5-203ENST00000375750 CD1BP29016 333 aa12.59□□□□□ -0.39
MSH5-203ENST00000375750 NHLH1Q02575 133 aa12.59□□□□□ -0.39
MSH5-203ENST00000375750 EDDM3AQ14507 147 aa12.59□□□□□ -0.39
MSH5-203ENST00000375750 TBC1D28Q2M2D7 210 aa12.59□□□□□ -0.39
MSH5-203ENST00000375750 NINJ1Q92982 152 aa12.59□□□□□ -0.39
MSH5-203ENST00000375750 PXMP4Q9Y6I8 212 aa12.59□□□□□ -0.39
MSH5-203ENST00000375750 A0A1W2PPV4 95 aa12.59□□□□□ -0.39
MSH5-203ENST00000375750 PROP1O75360 226 aa12.59□□□□□ -0.39
MSH5-203ENST00000375750 SPATA31B1PQ5VZV4 182 aa12.59□□□□□ -0.39
MSH5-203ENST00000375750 TMEM144Q7Z5S9 345 aa12.59□□□□□ -0.39
MSH5-203ENST00000375750 C11orf53Q8IXP5 236 aa12.59□□□□□ -0.39
MSH5-203ENST00000375750 ABHD12Q8N2K0 398 aa12.59□□□□□ -0.39
MSH5-203ENST00000375750 OCC1Q8TAD7 63 aa12.59□□□□□ -0.39
MSH5-203ENST00000375750 MS4A10Q96PG2 267 aa12.59□□□□□ -0.39
MSH5-203ENST00000375750 ELOVL5Q9NYP7 299 aa12.59□□□□□ -0.39
MSH5-203ENST00000375750 TP53TG3Q9ULZ0 132 aa12.59□□□□□ -0.39
MSH5-203ENST00000375750 APC2O95996 2303 aa12.59□□□□□ -0.39
MSH5-203ENST00000375750 A6NNC1 897 aa12.58□□□□□ -0.39
MSH5-203ENST00000375750 FCGR3BO75015 233 aa12.58□□□□□ -0.39
MSH5-203ENST00000375750 FOSL1P15407 271 aa12.58□□□□□ -0.39
MSH5-203ENST00000375750 RPL29P47914 159 aaKnown RBP12.58□□□□□ -0.39
MSH5-203ENST00000375750 CATR1Q13166 79 aa12.58□□□□□ -0.39
MSH5-203ENST00000375750 IQCJQ1A5X6 159 aa12.58□□□□□ -0.39
MSH5-203ENST00000375750 IGFL3Q6UXB1 125 aa12.58□□□□□ -0.39
MSH5-203ENST00000375750 CNEP1R1Q8N9A8 125 aa12.58□□□□□ -0.39
MSH5-203ENST00000375750 BEND2Q8NDZ0 799 aa12.58□□□□□ -0.39
MSH5-203ENST00000375750 TBX15Q96SF7 602 aa12.58□□□□□ -0.39
MSH5-203ENST00000375750 MSL2Q9HCI7 577 aa12.58□□□□□ -0.39
MSH5-203ENST00000375750 NAGKQ9UJ70 344 aa12.58□□□□□ -0.39
MSH5-203ENST00000375750 TET2Q6N021 2002 aaPredicted RBP12.58□□□□□ -0.4
MSH5-203ENST00000375750 RAB29O14966 203 aa12.58□□□□□ -0.4
MSH5-203ENST00000375750 VENTXO95231 258 aa12.58□□□□□ -0.4
MSH5-203ENST00000375750 FOXF2Q12947 444 aa12.58□□□□□ -0.4
MSH5-203ENST00000375750 VWC2Q2TAL6 325 aa12.58□□□□□ -0.4
MSH5-203ENST00000375750 C9orf106Q8NAJ2 232 aa12.58□□□□□ -0.4
MSH5-203ENST00000375750 Q8TCH9 128 aa12.58□□□□□ -0.4
MSH5-203ENST00000375750 R3HDM4Q96D70 268 aa12.58□□□□□ -0.4
MSH5-203ENST00000375750 SFRP2Q96HF1 295 aa12.58□□□□□ -0.4
MSH5-203ENST00000375750 F6UZH7 168 aa12.58□□□□□ -0.4
MSH5-203ENST00000375750 RAB4BP61018 213 aa12.58□□□□□ -0.4
MSH5-203ENST00000375750 RBMXL3Q8N7X1 1067 aaKnown RBP12.58□□□□□ -0.4
MSH5-203ENST00000375750 SARAFQ96BY9 339 aa12.58□□□□□ -0.4
MSH5-203ENST00000375750 MS4A5Q9H3V2 200 aa12.58□□□□□ -0.4
MSH5-203ENST00000375750 WDR83OSQ9Y284 106 aa12.58□□□□□ -0.4
MSH5-203ENST00000375750 YTHDF2Q9Y5A9 579 aaKnown RBP12.58□□□□□ -0.4
MSH5-203ENST00000375750 C17orf112F2Z3M2 114 aa12.57□□□□□ -0.4
MSH5-203ENST00000375750 SPINK4O60575 86 aa12.57□□□□□ -0.4
MSH5-203ENST00000375750 FOXH1O75593 365 aa12.57□□□□□ -0.4
MSH5-203ENST00000375750 LINC00310P59036 64 aa12.57□□□□□ -0.4
MSH5-203ENST00000375750 FAM214BQ7L5A3 538 aa12.57□□□□□ -0.4
MSH5-203ENST00000375750 Q8IYB0 196 aa12.57□□□□□ -0.4
MSH5-203ENST00000375750 OOEPA6NGQ2 149 aa12.57□□□□□ -0.4
MSH5-203ENST00000375750 GFRA3O60609 400 aa12.57□□□□□ -0.4
MSH5-203ENST00000375750 CCKARP32238 428 aa12.57□□□□□ -0.4
MSH5-203ENST00000375750 VWA1Q6PCB0 445 aa12.57□□□□□ -0.4
MSH5-203ENST00000375750 TREML4Q6UXN2 200 aa12.57□□□□□ -0.4
MSH5-203ENST00000375750 ZNF705AQ6ZN79 300 aaPredicted RBP12.57□□□□□ -0.4
MSH5-203ENST00000375750 Q6ZS92 163 aa12.57□□□□□ -0.4
MSH5-203ENST00000375750 MGST2Q99735 147 aa12.57□□□□□ -0.4
MSH5-203ENST00000375750 ICE1Q9Y2F5 2266 aa12.56□□□□□ -0.4
MSH5-203ENST00000375750 IGHV1-2P23083 117 aa12.56□□□□□ -0.4
MSH5-203ENST00000375750 CDKN1AP38936 164 aa12.56□□□□□ -0.4
MSH5-203ENST00000375750 RPL39P5Q59GN2 51 aa12.56□□□□□ -0.4
MSH5-203ENST00000375750 ASPHD1Q5U4P2 390 aa12.56□□□□□ -0.4
MSH5-203ENST00000375750 Q6ZWC4 215 aa12.56□□□□□ -0.4
MSH5-203ENST00000375750 KLF14Q8TD94 323 aaPredicted RBP12.56□□□□□ -0.4
MSH5-203ENST00000375750 CEP295Q9C0D2 2601 aa12.56□□□□□ -0.4
MSH5-203ENST00000375750 ANKRD11Q6UB99 2663 aaPredicted RBP12.56□□□□□ -0.4
MSH5-203ENST00000375750 K7EN84 100 aa12.56□□□□□ -0.4
MSH5-203ENST00000375750 MYOD1P15172 320 aa12.56□□□□□ -0.4
MSH5-203ENST00000375750 KIR2DL2P43627 348 aaPredicted RBP12.56□□□□□ -0.4
MSH5-203ENST00000375750 ERVFC1-1P60608 527 aa12.56□□□□□ -0.4
MSH5-203ENST00000375750 LEAP2Q969E1 77 aa12.56□□□□□ -0.4
MSH5-203ENST00000375750 CACNA1GO43497 2377 aa12.55□□□□□ -0.4
MSH5-203ENST00000375750 MDFIC2A0A1B0GVS7 189 aa12.55□□□□□ -0.4
MSH5-203ENST00000375750 KITLGP21583 273 aa12.55□□□□□ -0.4
MSH5-203ENST00000375750 FABP6P51161 128 aa12.55□□□□□ -0.4
MSH5-203ENST00000375750 OR5I1Q13606 314 aa12.55□□□□□ -0.4
MSH5-203ENST00000375750 FAM122AQ96E09 287 aa12.55□□□□□ -0.4
MSH5-203ENST00000375750 C1orf159Q96HA4 380 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms