RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 RBPMSQ93062 196 aaKnown RBP11.81□□□□□ -0.52
SMPDL3B-201ENST00000373888 PLEKHA2Q9HB19 425 aa11.81□□□□□ -0.52
SMPDL3B-201ENST00000373888 H0YJW9 148 aa11.8□□□□□ -0.52
SMPDL3B-201ENST00000373888 TAAR5O14804 337 aa11.8□□□□□ -0.52
SMPDL3B-201ENST00000373888 RBFOX2O43251 390 aaKnown RBP eCLIP11.8□□□□□ -0.52
SMPDL3B-201ENST00000373888 CFDP00746 253 aaPredicted RBP11.8□□□□□ -0.52
SMPDL3B-201ENST00000373888 EIF5AP63241 154 aaKnown RBP11.8□□□□□ -0.52
SMPDL3B-201ENST00000373888 FAM120AOSQ5T036 256 aa11.8□□□□□ -0.52
SMPDL3B-201ENST00000373888 LYZL2Q7Z4W2 148 aa11.8□□□□□ -0.52
SMPDL3B-201ENST00000373888 SLC35G3Q8N808 338 aa11.8□□□□□ -0.52
SMPDL3B-201ENST00000373888 CD300LFQ8TDQ1 290 aa11.8□□□□□ -0.52
SMPDL3B-201ENST00000373888 ST8SIA2Q92186 375 aa11.8□□□□□ -0.52
SMPDL3B-201ENST00000373888 CFHR4Q92496 578 aa11.8□□□□□ -0.52
SMPDL3B-201ENST00000373888 SMR3AQ99954 134 aa11.8□□□□□ -0.52
SMPDL3B-201ENST00000373888 TLN2Q9Y4G6 2542 aa11.8□□□□□ -0.52
SMPDL3B-201ENST00000373888 A0A0U1RQK1 487 aa11.79□□□□□ -0.52
SMPDL3B-201ENST00000373888 E5RGE8 158 aa11.79□□□□□ -0.52
SMPDL3B-201ENST00000373888 H0YIZ8 118 aa11.79□□□□□ -0.52
SMPDL3B-201ENST00000373888 RAMP3O60896 148 aa11.79□□□□□ -0.52
SMPDL3B-201ENST00000373888 DEDDO75618 318 aa11.79□□□□□ -0.52
SMPDL3B-201ENST00000373888 LY6G6DO95868 133 aa11.79□□□□□ -0.52
SMPDL3B-201ENST00000373888 APOA2P02652 100 aa11.79□□□□□ -0.52
SMPDL3B-201ENST00000373888 RRASP10301 218 aa11.79□□□□□ -0.52
SMPDL3B-201ENST00000373888 VDAC1P21796 283 aa11.79□□□□□ -0.52
SMPDL3B-201ENST00000373888 MC5RP33032 325 aa11.79□□□□□ -0.52
SMPDL3B-201ENST00000373888 ZNF585BQ52M93 769 aa11.79□□□□□ -0.52
SMPDL3B-201ENST00000373888 MOB3BQ86TA1 216 aa11.79□□□□□ -0.52
SMPDL3B-201ENST00000373888 SELENOHQ8IZQ5 122 aaKnown RBP11.79□□□□□ -0.52
SMPDL3B-201ENST00000373888 SPAG16Q8N0X2 631 aa11.79□□□□□ -0.52
SMPDL3B-201ENST00000373888 OR1S1Q8NH92 325 aa11.79□□□□□ -0.52
SMPDL3B-201ENST00000373888 STOML3Q8TAV4 291 aa11.79□□□□□ -0.52
SMPDL3B-201ENST00000373888 NSG2Q9Y328 171 aa11.79□□□□□ -0.52
SMPDL3B-201ENST00000373888 RPS10-NUDT3A0A1W2PQS6 291 aa11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 TIMM23O14925 209 aa11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 ST8SIA3O43173 380 aa11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 GATCO43716 136 aaKnown RBP11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 FCGR3BO75015 233 aa11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 SERPINE2P07093 398 aa11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 SLC25A6P12236 298 aa11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 PAX6P26367 422 aa11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 CD1BP29016 333 aa11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 RAB13P51153 203 aa11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 RTL8BQ17RB0 113 aa11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 TMEM95Q3KNT9 176 aa11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 OR2B11Q5JQS5 317 aa11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 DHRS7BQ6IAN0 325 aaPredicted RBP11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 PDPNQ86YL7 162 aa11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 LINC00518Q8N0U6 118 aa11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 OR4S2Q8NH73 311 aa11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 ZNF471Q9BX82 626 aaPredicted RBP11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 MEGF9Q9H1U4 602 aa11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 SLC35D1Q9NTN3 355 aa11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 OR5AC2Q9NZP5 309 aa11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 FAM96BQ9Y3D0 163 aa11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 HIVEP1P15822 2718 aa11.78□□□□□ -0.52
SMPDL3B-201ENST00000373888 TRIM77I1YAP6 450 aa11.77□□□□□ -0.52
SMPDL3B-201ENST00000373888 FBP1P09467 338 aa11.77□□□□□ -0.52
SMPDL3B-201ENST00000373888 TPT1P13693 172 aaKnown RBP11.77□□□□□ -0.52
SMPDL3B-201ENST00000373888 FAM71E2Q8N5Q1 922 aa11.77□□□□□ -0.52
SMPDL3B-201ENST00000373888 MS4A7Q9GZW8 240 aaPredicted RBP11.77□□□□□ -0.52
SMPDL3B-201ENST00000373888 SLC25A32Q9H2D1 315 aa11.77□□□□□ -0.52
SMPDL3B-201ENST00000373888 WASHC3Q9Y3C0 194 aa11.77□□□□□ -0.52
SMPDL3B-201ENST00000373888 SOX21Q9Y651 276 aaPredicted RBP11.77□□□□□ -0.52
SMPDL3B-201ENST00000373888 IGHV3-72A0A0B4J1Y9 119 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 FAM90A9PA6NNJ1 464 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 K7EPK0 472 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 SPDEFO95238 335 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 HPRT1P00492 218 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 IGKV1-16P04430 117 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 PVALBP20472 110 aaPredicted RBP11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 HNF1AP20823 631 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 LPAR6P43657 344 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 DYNLT3P51808 116 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 CLEC9AQ6UXN8 241 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 OR4D5Q8NGN0 318 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 LRRC20Q8TCA0 184 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 LSM10Q969L4 123 aaKnown RBP11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 ZC4H2Q9NQZ6 224 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 MED9Q9NWA0 146 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 POMT1Q9Y6A1 747 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 H7C2Y5 167 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 ATG12O94817 140 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 S1PR2O95136 353 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 VENTXO95231 258 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 SCGB1D2O95969 90 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 IGKV1-39P01597 117 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 MBPP02686 304 aaPredicted RBP11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 IGKV1D-39P04432 117 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 BRS3P32247 399 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 P2RY1P47900 373 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 AANATQ16613 207 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 TMEM177Q53S58 311 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 NMSQ5H8A3 153 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 ALKAL2Q6UX46 152 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 IL17RELQ6ZVW7 336 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 BCL6BQ8N143 479 aaPredicted RBP11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 OR4C13Q8NGP0 309 aa11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 FLYWCH2Q96CP2 140 aaKnown RBP11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 RRNAD1Q96FB5 475 aaKnown RBP11.76□□□□□ -0.53
SMPDL3B-201ENST00000373888 LSM5Q9Y4Y9 91 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms