RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 UQCRFS1P47985 274 aa15.97■□□□□ 0.15
HDAC1-201ENST00000373548 TAGLNQ01995 201 aaKnown RBP15.97■□□□□ 0.15
HDAC1-201ENST00000373548 FAM74A3Q4VXF1 159 aa15.97■□□□□ 0.15
HDAC1-201ENST00000373548 AVPI1Q5T686 147 aa15.97■□□□□ 0.15
HDAC1-201ENST00000373548 C11orf71Q6IPW1 123 aa15.97■□□□□ 0.15
HDAC1-201ENST00000373548 CENPVQ7Z7K6 275 aaPredicted RBP15.97■□□□□ 0.15
HDAC1-201ENST00000373548 RALYQ9UKM9 306 aaKnown RBP15.97■□□□□ 0.15
HDAC1-201ENST00000373548 SRRM4A7MD48 611 aaKnown RBP15.97■□□□□ 0.15
HDAC1-201ENST00000373548 IGHV1-8P0DP01 117 aa15.97■□□□□ 0.15
HDAC1-201ENST00000373548 RARRES2Q99969 163 aa15.97■□□□□ 0.15
HDAC1-201ENST00000373548 RAB1BQ9H0U4 201 aa15.97■□□□□ 0.15
HDAC1-201ENST00000373548 KIAA1456Q9P272 454 aa15.97■□□□□ 0.15
HDAC1-201ENST00000373548 MALRD1Q5VYJ5 2156 aa15.96■□□□□ 0.15
HDAC1-201ENST00000373548 LY6HO94772 140 aa15.96■□□□□ 0.15
HDAC1-201ENST00000373548 SNAPINO95295 136 aa15.96■□□□□ 0.15
HDAC1-201ENST00000373548 IFNA10P01566 189 aa15.96■□□□□ 0.15
HDAC1-201ENST00000373548 SOD3P08294 240 aa15.96■□□□□ 0.15
HDAC1-201ENST00000373548 FGF7P21781 194 aa15.96■□□□□ 0.15
HDAC1-201ENST00000373548 NPBWR1P48145 328 aa15.96■□□□□ 0.15
HDAC1-201ENST00000373548 HNF4GQ14541 408 aa15.96■□□□□ 0.15
HDAC1-201ENST00000373548 ZNF726P1Q15940 193 aa15.96■□□□□ 0.15
HDAC1-201ENST00000373548 OR10X1Q8NGY0 326 aa15.96■□□□□ 0.15
HDAC1-201ENST00000373548 TRAV1-1A0A0B4J248 108 aa15.95■□□□□ 0.14
HDAC1-201ENST00000373548 H0YJW9 148 aa15.95■□□□□ 0.14
HDAC1-201ENST00000373548 RRHO14718 337 aa15.95■□□□□ 0.14
HDAC1-201ENST00000373548 HBE1P02100 147 aa15.95■□□□□ 0.14
HDAC1-201ENST00000373548 MDKP21741 143 aaPredicted RBP15.95■□□□□ 0.14
HDAC1-201ENST00000373548 REG1BP48304 166 aa15.95■□□□□ 0.14
HDAC1-201ENST00000373548 HOXA1P49639 335 aaPredicted RBP15.95■□□□□ 0.14
HDAC1-201ENST00000373548 ELLP55199 621 aaPredicted RBP15.95■□□□□ 0.14
HDAC1-201ENST00000373548 HSPE1P61604 102 aaKnown RBP15.95■□□□□ 0.14
HDAC1-201ENST00000373548 RPP30P78346 268 aaKnown RBP15.95■□□□□ 0.14
HDAC1-201ENST00000373548 DIAPH2-AS1Q14236 149 aa15.95■□□□□ 0.14
HDAC1-201ENST00000373548 C4orf17Q53FE4 359 aa15.95■□□□□ 0.14
HDAC1-201ENST00000373548 OR5AN1Q8NGI8 311 aa15.95■□□□□ 0.14
HDAC1-201ENST00000373548 TMEM170AQ8WVE7 144 aa15.95■□□□□ 0.14
HDAC1-201ENST00000373548 ST6GALNAC6Q969X2 333 aa15.95■□□□□ 0.14
HDAC1-201ENST00000373548 KPTNQ9Y664 436 aa15.95■□□□□ 0.14
HDAC1-201ENST00000373548 RBFOX3A6NFN3 312 aa15.95■□□□□ 0.14
HDAC1-201ENST00000373548 SCAF4O95104 1147 aaKnown RBP15.95■□□□□ 0.14
HDAC1-201ENST00000373548 MYOD1P15172 320 aa15.95■□□□□ 0.14
HDAC1-201ENST00000373548 TMEM41BQ5BJD5 291 aa15.95■□□□□ 0.14
HDAC1-201ENST00000373548 ABHD12Q8N2K0 398 aa15.95■□□□□ 0.14
HDAC1-201ENST00000373548 OR9G1Q8NH87 305 aa15.95■□□□□ 0.14
HDAC1-201ENST00000373548 TNCP24821 2201 aa15.95■□□□□ 0.14
HDAC1-201ENST00000373548 HRNRQ86YZ3 2850 aaPredicted RBP15.94■□□□□ 0.14
HDAC1-201ENST00000373548 UPK2O00526 184 aa15.94■□□□□ 0.14
HDAC1-201ENST00000373548 APOA2P02652 100 aa15.94■□□□□ 0.14
HDAC1-201ENST00000373548 GNLYP22749 145 aa15.94■□□□□ 0.14
HDAC1-201ENST00000373548 FAM71F2Q6NXP2 309 aa15.94■□□□□ 0.14
HDAC1-201ENST00000373548 SSX7Q7RTT5 188 aa15.94■□□□□ 0.14
HDAC1-201ENST00000373548 ITLN2Q8WWU7 325 aaPredicted RBP15.94■□□□□ 0.14
HDAC1-201ENST00000373548 TMEM186Q96B77 213 aa15.94■□□□□ 0.14
HDAC1-201ENST00000373548 RCC1LQ96I51 464 aaKnown RBP15.94■□□□□ 0.14
HDAC1-201ENST00000373548 ZNF137PP52743 207 aa15.94■□□□□ 0.14
HDAC1-201ENST00000373548 ACSM6Q6P461 480 aa15.94■□□□□ 0.14
HDAC1-201ENST00000373548 MBD3L1Q8WWY6 194 aa15.94■□□□□ 0.14
HDAC1-201ENST00000373548 NABP2Q9BQ15 211 aa15.94■□□□□ 0.14
HDAC1-201ENST00000373548 TMEM133Q9H2Q1 129 aa15.94■□□□□ 0.14
HDAC1-201ENST00000373548 PRNDQ9UKY0 176 aa15.94■□□□□ 0.14
HDAC1-201ENST00000373548 OR51B2Q9Y5P1 312 aa15.94■□□□□ 0.14
HDAC1-201ENST00000373548 LRBAP50851 2863 aa15.94■□□□□ 0.14
HDAC1-201ENST00000373548 TMEM8BA6NDV4 472 aa15.93■□□□□ 0.14
HDAC1-201ENST00000373548 PRSS46E5RG02 174 aa15.93■□□□□ 0.14
HDAC1-201ENST00000373548 H7C2Y5 167 aa15.93■□□□□ 0.14
HDAC1-201ENST00000373548 TSPAN4O14817 238 aa15.93■□□□□ 0.14
HDAC1-201ENST00000373548 SAA1P0DJI8 122 aaPredicted RBP15.93■□□□□ 0.14
HDAC1-201ENST00000373548 RAB2AP61019 212 aa15.93■□□□□ 0.14
HDAC1-201ENST00000373548 HAGHQ16775 308 aa15.93■□□□□ 0.14
HDAC1-201ENST00000373548 ETV3LQ6ZN32 361 aa15.93■□□□□ 0.14
HDAC1-201ENST00000373548 OSR1Q8TAX0 266 aaPredicted RBP15.93■□□□□ 0.14
HDAC1-201ENST00000373548 NPCDR1Q9BY65 106 aa15.93■□□□□ 0.14
HDAC1-201ENST00000373548 SLC35B3Q9H1N7 401 aa15.93■□□□□ 0.14
HDAC1-201ENST00000373548 SMDT1Q9H4I9 107 aa15.93■□□□□ 0.14
HDAC1-201ENST00000373548 A0A1W2PPR1 153 aa15.92■□□□□ 0.14
HDAC1-201ENST00000373548 IGKV1D-33P01593 117 aa15.92■□□□□ 0.14
HDAC1-201ENST00000373548 IGKV1-33P01594 117 aa15.92■□□□□ 0.14
HDAC1-201ENST00000373548 CLDND2Q8NHS1 167 aa15.92■□□□□ 0.14
HDAC1-201ENST00000373548 BET1LQ9NYM9 111 aa15.92■□□□□ 0.14
HDAC1-201ENST00000373548 TMEM177Q53S58 311 aa15.92■□□□□ 0.14
HDAC1-201ENST00000373548 LCN15Q6UWW0 184 aa15.92■□□□□ 0.14
HDAC1-201ENST00000373548 CLRN3Q8NCR9 226 aa15.92■□□□□ 0.14
HDAC1-201ENST00000373548 HARBI1Q96MB7 349 aa15.92■□□□□ 0.14
HDAC1-201ENST00000373548 AIFM2Q9BRQ8 373 aa15.92■□□□□ 0.14
HDAC1-201ENST00000373548 WDR83OSQ9Y284 106 aa15.92■□□□□ 0.14
HDAC1-201ENST00000373548 ZNF257Q9Y2Q1 563 aa15.92■□□□□ 0.14
HDAC1-201ENST00000373548 KBTBD11O94819 623 aa15.91■□□□□ 0.14
HDAC1-201ENST00000373548 CD1BP29016 333 aa15.91■□□□□ 0.14
HDAC1-201ENST00000373548 TMEM88Q6PEY1 159 aa15.91■□□□□ 0.14
HDAC1-201ENST00000373548 DTX2Q86UW9 622 aa15.91■□□□□ 0.14
HDAC1-201ENST00000373548 RPP25LQ8N5L8 163 aaKnown RBP15.91■□□□□ 0.14
HDAC1-201ENST00000373548 DLX1P56177 255 aa15.91■□□□□ 0.14
HDAC1-201ENST00000373548 ICAM4Q14773 271 aa15.91■□□□□ 0.14
HDAC1-201ENST00000373548 ZNF506Q5JVG8 444 aa15.91■□□□□ 0.14
HDAC1-201ENST00000373548 WDR25Q64LD2 544 aaPredicted RBP15.91■□□□□ 0.14
HDAC1-201ENST00000373548 ZNF787Q6DD87 383 aa15.91■□□□□ 0.14
HDAC1-201ENST00000373548 Q8N7P7 452 aa15.91■□□□□ 0.14
HDAC1-201ENST00000373548 OR8B3Q8NGG8 313 aa15.91■□□□□ 0.14
HDAC1-201ENST00000373548 NEU4Q8WWR8 484 aaPredicted RBP15.91■□□□□ 0.14
HDAC1-201ENST00000373548 OR8B2Q96RD0 313 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms