RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 PERPQ96FX8 193 aa10.85□□□□□ -0.67
GPC4-201ENST00000370828 SF3B5Q9BWJ5 86 aaKnown RBP10.85□□□□□ -0.67
GPC4-201ENST00000370828 ST20Q9HBF5 79 aa10.85□□□□□ -0.67
GPC4-201ENST00000370828 KLF13Q9Y2Y9 288 aaPredicted RBP10.85□□□□□ -0.67
GPC4-201ENST00000370828 HILPDAQ9Y5L2 63 aa10.85□□□□□ -0.67
GPC4-201ENST00000370828 RRHO14718 337 aa10.85□□□□□ -0.67
GPC4-201ENST00000370828 SSTR5P35346 364 aa10.85□□□□□ -0.67
GPC4-201ENST00000370828 MYOZ3Q8TDC0 251 aa10.85□□□□□ -0.67
GPC4-201ENST00000370828 HIST1H4GQ99525 98 aa10.85□□□□□ -0.67
GPC4-201ENST00000370828 SLC25A33Q9BSK2 321 aa10.85□□□□□ -0.67
GPC4-201ENST00000370828 MAP1LC3AQ9H492 121 aa10.85□□□□□ -0.67
GPC4-201ENST00000370828 PRNDQ9UKY0 176 aa10.85□□□□□ -0.67
GPC4-201ENST00000370828 GPR6P46095 362 aaPredicted RBP10.85□□□□□ -0.67
GPC4-201ENST00000370828 PMVKQ15126 192 aa10.85□□□□□ -0.67
GPC4-201ENST00000370828 ABHD12Q8N2K0 398 aa10.85□□□□□ -0.67
GPC4-201ENST00000370828 NPCDR1Q9BY65 106 aa10.85□□□□□ -0.67
GPC4-201ENST00000370828 PGPA6NDG6 321 aa10.84□□□□□ -0.67
GPC4-201ENST00000370828 SMIM10L1P0DMW3 83 aa10.84□□□□□ -0.67
GPC4-201ENST00000370828 CCL3P10147 92 aa10.84□□□□□ -0.67
GPC4-201ENST00000370828 SUPT4H1P63272 117 aaKnown RBP10.84□□□□□ -0.67
GPC4-201ENST00000370828 TMEM92Q6UXU6 159 aa10.84□□□□□ -0.67
GPC4-201ENST00000370828 ZNF525Q8N782 197 aa10.84□□□□□ -0.67
GPC4-201ENST00000370828 OR1L1Q8NH94 360 aa10.84□□□□□ -0.67
GPC4-201ENST00000370828 SMIM10Q96HG1 83 aa10.84□□□□□ -0.67
GPC4-201ENST00000370828 MDC1Q14676 2089 aaKnown RBP10.84□□□□□ -0.67
GPC4-201ENST00000370828 DOCK1Q14185 1865 aa10.84□□□□□ -0.67
GPC4-201ENST00000370828 HIST1H1AQ02539 215 aaPredicted RBP10.84□□□□□ -0.67
GPC4-201ENST00000370828 OR4C13Q8NGP0 309 aa10.84□□□□□ -0.67
GPC4-201ENST00000370828 GATAD1Q8WUU5 269 aa10.84□□□□□ -0.67
GPC4-201ENST00000370828 CDX2Q99626 313 aaPredicted RBP10.84□□□□□ -0.67
GPC4-201ENST00000370828 TNXAQ16473 311 aa10.84□□□□□ -0.67
GPC4-201ENST00000370828 PSMG4Q5JS54 123 aa10.84□□□□□ -0.67
GPC4-201ENST00000370828 VSIRQ9H7M9 311 aa10.84□□□□□ -0.67
GPC4-201ENST00000370828 AMMECR1Q9Y4X0 333 aaPredicted RBP10.84□□□□□ -0.67
GPC4-201ENST00000370828 F5H697 171 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 H7C2G1 150 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 NAPSAO96009 420 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 GZMHP20718 246 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 KIF26BQ2KJY2 2108 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 CEACAM21Q3KPI0 293 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 NEUROG1Q92886 237 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 ZDHHC16Q969W1 377 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 WBP1LQ9NX94 342 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 DLL3Q9NYJ7 618 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 IGKV1D-8A0A087WSZ0 117 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 CLDN18P56856 261 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 ZNF418Q8TF45 676 aaPredicted RBP10.83□□□□□ -0.68
GPC4-201ENST00000370828 PROCRQ9UNN8 238 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 STPG1Q5TH74 334 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 LINC00596Q86U02 117 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 NUP37Q8NFH4 326 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 ZNF502Q8TBZ5 544 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 FAM222BQ8WU58 562 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 CXXC4Q9H2H0 198 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 THYN1Q9P016 225 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 TRAV9-2A0A087WT02 112 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 A0A0J9YW62 118 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 TDGF1P13385 188 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 RND1Q92730 232 aa10.83□□□□□ -0.68
GPC4-201ENST00000370828 LOC105371242A0A075B767 164 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 PPIAL4CA0A0B4J2A2 164 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 OR2H2O95918 312 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 PPIAL4GP0DN37 164 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 AZU1P20160 251 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 SOX8P57073 446 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 TMEM240Q5SV17 173 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 FER1L6-AS1Q8NA97 138 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 TMEM242Q9NWH2 141 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 LYPD3O95274 346 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 GAGE13Q4V321 117 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 ZNF645Q8N7E2 425 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 C18orf12Q96KH6 178 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 GAGE12JA6NER3 117 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 H3BTX0 84 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 LINC01565O15544 149 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 GAGE7O76087 117 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 GAGE12FP0CL80 117 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 GAGE12GP0CL81 117 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 GAGE12IP0CL82 117 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 ACP1P24666 158 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 MPZP25189 248 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 CKS2P33552 79 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 GAGE4Q13068 117 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 GCSAMLQ5JQS6 135 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 TEX38Q6PEX7 206 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 LINC00114Q6XXX2 140 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 TM2D1Q9BX74 207 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 CGAP01215 116 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 TFF2Q03403 129 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 DRAM1Q8N682 238 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 SLC25A40Q8TBP6 338 aa10.82□□□□□ -0.68
GPC4-201ENST00000370828 MPDZO75970 2070 aa10.81□□□□□ -0.68
GPC4-201ENST00000370828 A0A0A6YYD4 124 aa10.81□□□□□ -0.68
GPC4-201ENST00000370828 K7ESF4 209 aa10.81□□□□□ -0.68
GPC4-201ENST00000370828 ZNF324O75467 553 aaPredicted RBP10.81□□□□□ -0.68
GPC4-201ENST00000370828 IGHV2-5P01817 119 aa10.81□□□□□ -0.68
GPC4-201ENST00000370828 MEF2CQ06413 473 aaPredicted RBP10.81□□□□□ -0.68
GPC4-201ENST00000370828 KCNMB1Q16558 191 aa10.81□□□□□ -0.68
GPC4-201ENST00000370828 C3AR1Q16581 482 aa10.81□□□□□ -0.68
GPC4-201ENST00000370828 GUSBP11Q6P575 273 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms