RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 CKS2P33552 79 aa16.63■□□□□ 0.25
LMO4-202ENST00000370544 CD81P60033 236 aa16.63■□□□□ 0.25
LMO4-202ENST00000370544 RELQ04864 619 aaPredicted RBP16.63■□□□□ 0.25
LMO4-202ENST00000370544 TBX15Q96SF7 602 aa16.63■□□□□ 0.25
LMO4-202ENST00000370544 HLA-DQA1P01909 254 aa16.63■□□□□ 0.25
LMO4-202ENST00000370544 ACAA1P09110 424 aaPredicted RBP16.63■□□□□ 0.25
LMO4-202ENST00000370544 SSBP3Q9BWW4 388 aaPredicted RBP16.63■□□□□ 0.25
LMO4-202ENST00000370544 AMY1AP04745 511 aa16.63■□□□□ 0.25
LMO4-202ENST00000370544 FHITP49789 147 aa16.63■□□□□ 0.25
LMO4-202ENST00000370544 PSMG3Q9BT73 122 aaPredicted RBP16.63■□□□□ 0.25
LMO4-202ENST00000370544 PIKFYVEQ9Y2I7 2098 aa16.63■□□□□ 0.25
LMO4-202ENST00000370544 IGLV3-32A0A0A0MS00 114 aa16.63■□□□□ 0.25
LMO4-202ENST00000370544 LYPD3O95274 346 aa16.63■□□□□ 0.25
LMO4-202ENST00000370544 SMAGPQ0VAQ4 97 aa16.63■□□□□ 0.25
LMO4-202ENST00000370544 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.63■□□□□ 0.25
LMO4-202ENST00000370544 CBY1Q9Y3M2 126 aa16.63■□□□□ 0.25
LMO4-202ENST00000370544 CDK2AP1O14519 115 aa16.63■□□□□ 0.25
LMO4-202ENST00000370544 MOSP00540 346 aa16.63■□□□□ 0.25
LMO4-202ENST00000370544 OSR1Q8TAX0 266 aaPredicted RBP16.63■□□□□ 0.25
LMO4-202ENST00000370544 RPS20P60866 119 aaKnown RBP16.62■□□□□ 0.25
LMO4-202ENST00000370544 RELBQ01201 579 aa16.62■□□□□ 0.25
LMO4-202ENST00000370544 TGIF2-C20orf24A0A0A6YYL0 155 aa16.62■□□□□ 0.25
LMO4-202ENST00000370544 PQLC2LA1A4F0 135 aa16.62■□□□□ 0.25
LMO4-202ENST00000370544 OR4C46A6NHA9 309 aa16.62■□□□□ 0.25
LMO4-202ENST00000370544 CD99P14209 185 aa16.62■□□□□ 0.25
LMO4-202ENST00000370544 BTF3P20290 206 aaKnown RBP16.62■□□□□ 0.25
LMO4-202ENST00000370544 PKIAP61925 76 aa16.62■□□□□ 0.25
LMO4-202ENST00000370544 IFITM2Q01629 132 aa16.62■□□□□ 0.25
LMO4-202ENST00000370544 OR4B1Q8NGF8 309 aa16.62■□□□□ 0.25
LMO4-202ENST00000370544 NEU4Q8WWR8 484 aaPredicted RBP16.62■□□□□ 0.25
LMO4-202ENST00000370544 RAB9AP51151 201 aa16.62■□□□□ 0.25
LMO4-202ENST00000370544 CX3CL1P78423 397 aa16.62■□□□□ 0.25
LMO4-202ENST00000370544 KBTBD11-OT1A0A1B0GTJ5 212 aa16.62■□□□□ 0.25
LMO4-202ENST00000370544 PROB1E7EW31 1015 aa16.62■□□□□ 0.25
LMO4-202ENST00000370544 ANOS1P23352 680 aa16.62■□□□□ 0.25
LMO4-202ENST00000370544 ZP1P60852 638 aa16.62■□□□□ 0.25
LMO4-202ENST00000370544 A6NDN8 102 aa16.61■□□□□ 0.25
LMO4-202ENST00000370544 NPPCP23582 126 aa16.61■□□□□ 0.25
LMO4-202ENST00000370544 RRN3P1Q2M238 152 aa16.61■□□□□ 0.25
LMO4-202ENST00000370544 PLSCR2Q9NRY7 297 aa16.61■□□□□ 0.25
LMO4-202ENST00000370544 DEPPQ9NTK1 212 aa16.61■□□□□ 0.25
LMO4-202ENST00000370544 OTOFQ9HC10 1997 aa16.61■□□□□ 0.25
LMO4-202ENST00000370544 NYNRINQ9P2P1 1898 aaKnown RBP16.61■□□□□ 0.25
LMO4-202ENST00000370544 RTBDNQ9BSG5 229 aaPredicted RBP16.61■□□□□ 0.25
LMO4-202ENST00000370544 RTN4RQ9BZR6 473 aa16.61■□□□□ 0.25
LMO4-202ENST00000370544 NEUROG3Q9Y4Z2 214 aa16.61■□□□□ 0.25
LMO4-202ENST00000370544 M0QZK8 103 aa16.61■□□□□ 0.25
LMO4-202ENST00000370544 GGCTO75223 188 aaKnown RBP16.61■□□□□ 0.25
LMO4-202ENST00000370544 IL4P05112 153 aa16.61■□□□□ 0.25
LMO4-202ENST00000370544 FAM90A1Q86YD7 464 aa16.61■□□□□ 0.25
LMO4-202ENST00000370544 MRPL18Q9H0U6 180 aaKnown RBP16.61■□□□□ 0.25
LMO4-202ENST00000370544 IGHV3OR16-12A0A075B7B8 117 aa16.61■□□□□ 0.25
LMO4-202ENST00000370544 GCHFRP30047 84 aa16.61■□□□□ 0.25
LMO4-202ENST00000370544 LCN2P80188 198 aa16.61■□□□□ 0.25
LMO4-202ENST00000370544 DDB2Q92466 427 aa16.61■□□□□ 0.25
LMO4-202ENST00000370544 SCN2AQ99250 2005 aa16.61■□□□□ 0.25
LMO4-202ENST00000370544 C17orf98A8MV24 154 aa16.6■□□□□ 0.25
LMO4-202ENST00000370544 WDR25Q64LD2 544 aaPredicted RBP16.6■□□□□ 0.25
LMO4-202ENST00000370544 HSPB9Q9BQS6 159 aa16.6■□□□□ 0.25
LMO4-202ENST00000370544 GCGP01275 180 aa16.6■□□□□ 0.25
LMO4-202ENST00000370544 IL6RP08887 468 aaPredicted RBP16.6■□□□□ 0.25
LMO4-202ENST00000370544 AGAP20933 346 aa16.6■□□□□ 0.25
LMO4-202ENST00000370544 CYP2G1PQ6ZSU1 146 aa16.6■□□□□ 0.25
LMO4-202ENST00000370544 PARLQ9H300 379 aa16.6■□□□□ 0.25
LMO4-202ENST00000370544 GATAD1Q8WUU5 269 aa16.6■□□□□ 0.25
LMO4-202ENST00000370544 SRSF12Q8WXF0 261 aaKnown RBP16.6■□□□□ 0.25
LMO4-202ENST00000370544 DPM3Q9P2X0 92 aa16.6■□□□□ 0.25
LMO4-202ENST00000370544 LINC00305Q7Z4B0 112 aa16.6■□□□□ 0.25
LMO4-202ENST00000370544 GALNT14Q96FL9 552 aa16.6■□□□□ 0.25
LMO4-202ENST00000370544 PHLDA3Q9Y5J5 127 aa16.6■□□□□ 0.25
LMO4-202ENST00000370544 HAX1O00165 279 aa16.6■□□□□ 0.25
LMO4-202ENST00000370544 UCP1P25874 307 aa16.6■□□□□ 0.25
LMO4-202ENST00000370544 NMUP48645 174 aa16.6■□□□□ 0.25
LMO4-202ENST00000370544 C2orf68Q2NKX9 166 aa16.6■□□□□ 0.25
LMO4-202ENST00000370544 OR4A47Q6IF82 309 aa16.6■□□□□ 0.25
LMO4-202ENST00000370544 FAM53AQ6NSI3 398 aaPredicted RBP16.6■□□□□ 0.25
LMO4-202ENST00000370544 RAX2Q96IS3 184 aa16.6■□□□□ 0.25
LMO4-202ENST00000370544 NPCDR1Q9BY65 106 aa16.6■□□□□ 0.25
LMO4-202ENST00000370544 M0R3E3 92 aa16.59■□□□□ 0.25
LMO4-202ENST00000370544 DCTN5Q9BTE1 182 aa16.59■□□□□ 0.25
LMO4-202ENST00000370544 CSRP1P21291 193 aaKnown RBP16.59■□□□□ 0.25
LMO4-202ENST00000370544 SGK494Q96LW2 274 aa16.59■□□□□ 0.25
LMO4-202ENST00000370544 CHD5Q8TDI0 1954 aa16.59■□□□□ 0.25
LMO4-202ENST00000370544 NTN3O00634 580 aaPredicted RBP16.59■□□□□ 0.25
LMO4-202ENST00000370544 TCTAP57738 103 aa16.59■□□□□ 0.25
LMO4-202ENST00000370544 IGKV3D-15A0A087WSY6 115 aa16.59■□□□□ 0.25
LMO4-202ENST00000370544 RRHO14718 337 aa16.59■□□□□ 0.25
LMO4-202ENST00000370544 IGKV3-15P01624 115 aa16.59■□□□□ 0.25
LMO4-202ENST00000370544 CFHR1Q03591 330 aa16.59■□□□□ 0.25
LMO4-202ENST00000370544 MEF2CQ06413 473 aaPredicted RBP16.59■□□□□ 0.25
LMO4-202ENST00000370544 FBXL15Q9H469 300 aa16.59■□□□□ 0.25
LMO4-202ENST00000370544 CENPVQ7Z7K6 275 aaPredicted RBP16.58■□□□□ 0.25
LMO4-202ENST00000370544 RTN4RL2Q86UN3 420 aa16.58■□□□□ 0.25
LMO4-202ENST00000370544 OR1N2Q8NGR9 330 aa16.58■□□□□ 0.25
LMO4-202ENST00000370544 WBP1Q96G27 269 aa16.58■□□□□ 0.25
LMO4-202ENST00000370544 IFI27L2Q9H2X8 130 aa16.58■□□□□ 0.25
LMO4-202ENST00000370544 C17orf100A8MU93 164 aa16.58■□□□□ 0.24
LMO4-202ENST00000370544 CXorf65A6NEN9 183 aa16.58■□□□□ 0.24
LMO4-202ENST00000370544 LBHQ53QV2 105 aaPredicted RBP16.58■□□□□ 0.24
LMO4-202ENST00000370544 PET117Q6UWS5 81 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms