RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 CNN3Q15417 329 aaKnown RBP12.72□□□□□ -0.37
PHTF1-202ENST00000369598 COLCA1Q6ZS62 124 aa12.72□□□□□ -0.37
PHTF1-202ENST00000369598 RBMXL3Q8N7X1 1067 aaKnown RBP12.72□□□□□ -0.37
PHTF1-202ENST00000369598 PLPPR2Q96GM1 343 aa12.72□□□□□ -0.37
PHTF1-202ENST00000369598 UHRF2Q96PU4 802 aa12.72□□□□□ -0.37
PHTF1-202ENST00000369598 C20orf144Q9BQM9 153 aa12.72□□□□□ -0.37
PHTF1-202ENST00000369598 CRIM1Q9NZV1 1036 aa12.72□□□□□ -0.37
PHTF1-202ENST00000369598 TRBV20OR9-2A0A075B6H5 130 aa12.71□□□□□ -0.37
PHTF1-202ENST00000369598 hCG_38984A0A1B0GV85 526 aa12.71□□□□□ -0.37
PHTF1-202ENST00000369598 HYPMO75409 117 aa12.71□□□□□ -0.37
PHTF1-202ENST00000369598 IGKV1-39P01597 117 aa12.71□□□□□ -0.37
PHTF1-202ENST00000369598 IGKV1D-39P04432 117 aa12.71□□□□□ -0.37
PHTF1-202ENST00000369598 RBM11P57052 281 aaKnown RBP12.71□□□□□ -0.37
PHTF1-202ENST00000369598 ZNF816Q0VGE8 651 aaPredicted RBP12.71□□□□□ -0.37
PHTF1-202ENST00000369598 TEX43Q6ZNM6 134 aa12.71□□□□□ -0.37
PHTF1-202ENST00000369598 C9orf106Q8NAJ2 232 aa12.71□□□□□ -0.37
PHTF1-202ENST00000369598 SPSB1Q96BD6 273 aa12.71□□□□□ -0.37
PHTF1-202ENST00000369598 MGAQ8IWI9 3026 aa12.71□□□□□ -0.37
PHTF1-202ENST00000369598 LAMA5O15230 3695 aa12.71□□□□□ -0.37
PHTF1-202ENST00000369598 MDFIC2A0A1B0GVS7 189 aa12.71□□□□□ -0.38
PHTF1-202ENST00000369598 SPACA3Q8IXA5 215 aa12.71□□□□□ -0.38
PHTF1-202ENST00000369598 ZNF808Q8N4W9 903 aaPredicted RBP12.71□□□□□ -0.38
PHTF1-202ENST00000369598 APOBEC3DQ96AK3 386 aaPredicted RBP12.71□□□□□ -0.38
PHTF1-202ENST00000369598 ANAPC16Q96DE5 110 aa12.71□□□□□ -0.38
PHTF1-202ENST00000369598 POM121L2Q96KW2 1035 aa12.71□□□□□ -0.38
PHTF1-202ENST00000369598 NKX6-3A6NJ46 265 aa12.7□□□□□ -0.38
PHTF1-202ENST00000369598 YPEL1O60688 119 aa12.7□□□□□ -0.38
PHTF1-202ENST00000369598 SPSB4Q96A44 273 aa12.7□□□□□ -0.38
PHTF1-202ENST00000369598 YPEL2Q96QA6 119 aa12.7□□□□□ -0.38
PHTF1-202ENST00000369598 ELOVL5Q9NYP7 299 aa12.7□□□□□ -0.38
PHTF1-202ENST00000369598 CRYABP02511 175 aaKnown RBP12.7□□□□□ -0.38
PHTF1-202ENST00000369598 IGHV1-2P23083 117 aa12.7□□□□□ -0.38
PHTF1-202ENST00000369598 COMPP49747 757 aaPredicted RBP12.7□□□□□ -0.38
PHTF1-202ENST00000369598 FXYD3Q14802 87 aa12.7□□□□□ -0.38
PHTF1-202ENST00000369598 ACSF3Q4G176 576 aaPredicted RBP12.7□□□□□ -0.38
PHTF1-202ENST00000369598 MDP1Q86V88 176 aa12.7□□□□□ -0.38
PHTF1-202ENST00000369598 APC2O95996 2303 aa12.7□□□□□ -0.38
PHTF1-202ENST00000369598 ODAMA1E959 279 aa12.7□□□□□ -0.38
PHTF1-202ENST00000369598 F6UZH7 168 aa12.7□□□□□ -0.38
PHTF1-202ENST00000369598 LYZL6O75951 148 aa12.7□□□□□ -0.38
PHTF1-202ENST00000369598 IGKV1-5P01602 117 aa12.7□□□□□ -0.38
PHTF1-202ENST00000369598 KIR2DL2P43627 348 aaPredicted RBP12.7□□□□□ -0.38
PHTF1-202ENST00000369598 UBE2NP61088 152 aaKnown RBP12.7□□□□□ -0.38
PHTF1-202ENST00000369598 OR8B8Q15620 311 aa12.7□□□□□ -0.38
PHTF1-202ENST00000369598 MRPL21Q7Z2W9 205 aaKnown RBP12.7□□□□□ -0.38
PHTF1-202ENST00000369598 ABHD17AQ96GS6 310 aa12.7□□□□□ -0.38
PHTF1-202ENST00000369598 RAB40CQ96S21 281 aa12.7□□□□□ -0.38
PHTF1-202ENST00000369598 ACACAQ13085 2346 aa12.69□□□□□ -0.38
PHTF1-202ENST00000369598 CLDN14O95500 239 aa12.69□□□□□ -0.38
PHTF1-202ENST00000369598 NGFP01138 241 aa12.69□□□□□ -0.38
PHTF1-202ENST00000369598 RIPPLY3P57055 190 aa12.69□□□□□ -0.38
PHTF1-202ENST00000369598 HOXA4Q00056 320 aaPredicted RBP12.69□□□□□ -0.38
PHTF1-202ENST00000369598 ATP6V1FQ16864 119 aa12.69□□□□□ -0.38
PHTF1-202ENST00000369598 VWA1Q6PCB0 445 aa12.69□□□□□ -0.38
PHTF1-202ENST00000369598 Q6ZT83 130 aa12.69□□□□□ -0.38
PHTF1-202ENST00000369598 SFRP2Q96HF1 295 aa12.69□□□□□ -0.38
PHTF1-202ENST00000369598 GNB4Q9HAV0 340 aa12.69□□□□□ -0.38
PHTF1-202ENST00000369598 NAT8BQ9UHF3 227 aa12.69□□□□□ -0.38
PHTF1-202ENST00000369598 ARFGEF3Q5TH69 2177 aa12.69□□□□□ -0.38
PHTF1-202ENST00000369598 SCO2A0A1W2PP80 73 aa12.69□□□□□ -0.38
PHTF1-202ENST00000369598 G6PCP35575 357 aa12.69□□□□□ -0.38
PHTF1-202ENST00000369598 SELENOTP62341 195 aa12.69□□□□□ -0.38
PHTF1-202ENST00000369598 TMEM42Q69YG0 159 aa12.69□□□□□ -0.38
PHTF1-202ENST00000369598 MRPL54Q6P161 138 aaKnown RBP12.69□□□□□ -0.38
PHTF1-202ENST00000369598 OR8I2Q8N0Y5 310 aa12.69□□□□□ -0.38
PHTF1-202ENST00000369598 ZNF596Q8TC21 504 aa12.69□□□□□ -0.38
PHTF1-202ENST00000369598 REPIN1Q9BWE0 567 aaKnown RBP12.69□□□□□ -0.38
PHTF1-202ENST00000369598 NRN1Q9NPD7 142 aa12.69□□□□□ -0.38
PHTF1-202ENST00000369598 H0Y8G0 127 aa12.68□□□□□ -0.38
PHTF1-202ENST00000369598 SRP14P37108 136 aaKnown RBP12.68□□□□□ -0.38
PHTF1-202ENST00000369598 FUT6P51993 359 aa12.68□□□□□ -0.38
PHTF1-202ENST00000369598 FOXF2Q12947 444 aa12.68□□□□□ -0.38
PHTF1-202ENST00000369598 DAZAP2Q15038 168 aaPredicted RBP12.68□□□□□ -0.38
PHTF1-202ENST00000369598 GUSBP1Q15486 140 aa12.68□□□□□ -0.38
PHTF1-202ENST00000369598 Q56UQ5 140 aa12.68□□□□□ -0.38
PHTF1-202ENST00000369598 LHFPL2Q6ZUX7 228 aa12.68□□□□□ -0.38
PHTF1-202ENST00000369598 RP1L1Q8IWN7 2480 aaPredicted RBP12.68□□□□□ -0.38
PHTF1-202ENST00000369598 BOD1L1Q8NFC6 3051 aa12.68□□□□□ -0.38
PHTF1-202ENST00000369598 OCC1Q8TAD7 63 aa12.68□□□□□ -0.38
PHTF1-202ENST00000369598 HIPK2Q9H2X6 1198 aa12.68□□□□□ -0.38
PHTF1-202ENST00000369598 AGMATQ9BSE5 352 aa12.68□□□□□ -0.38
PHTF1-202ENST00000369598 ZNF586Q9NXT0 402 aa12.68□□□□□ -0.38
PHTF1-202ENST00000369598 DKK4Q9UBT3 224 aa12.68□□□□□ -0.38
PHTF1-202ENST00000369598 SSUH2Q9Y2M2 353 aa12.68□□□□□ -0.38
PHTF1-202ENST00000369598 MSRB2Q9Y3D2 182 aa12.68□□□□□ -0.38
PHTF1-202ENST00000369598 GOSR1O95249 250 aa12.67□□□□□ -0.38
PHTF1-202ENST00000369598 SERF2P84101 59 aa12.67□□□□□ -0.38
PHTF1-202ENST00000369598 S100A7AQ86SG5 101 aa12.67□□□□□ -0.38
PHTF1-202ENST00000369598 OR56B2PQ8NGI1 322 aa12.67□□□□□ -0.38
PHTF1-202ENST00000369598 MCRIP2Q9BUT9 160 aaKnown RBP12.67□□□□□ -0.38
PHTF1-202ENST00000369598 ZG16O60844 167 aa12.67□□□□□ -0.38
PHTF1-202ENST00000369598 RAMP3O60896 148 aa12.67□□□□□ -0.38
PHTF1-202ENST00000369598 ZNF253O75346 499 aa12.67□□□□□ -0.38
PHTF1-202ENST00000369598 SLC25A6P12236 298 aa12.67□□□□□ -0.38
PHTF1-202ENST00000369598 UBE2V1Q13404 147 aa12.67□□□□□ -0.38
PHTF1-202ENST00000369598 WFDC8Q8IUA0 241 aa12.67□□□□□ -0.38
PHTF1-202ENST00000369598 GAL3ST2Q9H3Q3 398 aa12.67□□□□□ -0.38
PHTF1-202ENST00000369598 TMEM250H0YL14 139 aa12.67□□□□□ -0.38
PHTF1-202ENST00000369598 SYNGR1O43759 233 aa12.67□□□□□ -0.38
PHTF1-202ENST00000369598 PSG1P11464 419 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms