RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 CLINT1Q14677 625 aa13.59□□□□□ -0.23
PHGDH-202ENST00000369409 SPANXN5Q5MJ07 72 aa13.59□□□□□ -0.23
PHGDH-202ENST00000369409 FAM74A1Q5RGS3 127 aa13.59□□□□□ -0.23
PHGDH-202ENST00000369409 MOB3BQ86TA1 216 aa13.59□□□□□ -0.23
PHGDH-202ENST00000369409 BAP18Q8IXM2 172 aa13.59□□□□□ -0.23
PHGDH-202ENST00000369409 SLC7A5P1Q8MH63 180 aa13.59□□□□□ -0.23
PHGDH-202ENST00000369409 MARVELD3Q96A59 401 aa13.59□□□□□ -0.23
PHGDH-202ENST00000369409 NUP50Q9UKX7 468 aa13.59□□□□□ -0.23
PHGDH-202ENST00000369409 INSIG2Q9Y5U4 225 aa13.59□□□□□ -0.23
PHGDH-202ENST00000369409 RNASEK-C17orf49H0YIS7 233 aa13.58□□□□□ -0.24
PHGDH-202ENST00000369409 TOX4O94842 621 aa13.58□□□□□ -0.24
PHGDH-202ENST00000369409 DYNLT3P51808 116 aa13.58□□□□□ -0.24
PHGDH-202ENST00000369409 RPS16P62249 146 aaKnown RBP13.58□□□□□ -0.24
PHGDH-202ENST00000369409 TPTE2P1Q5T6R2 138 aa13.58□□□□□ -0.24
PHGDH-202ENST00000369409 ZNF429Q86V71 674 aa13.58□□□□□ -0.24
PHGDH-202ENST00000369409 OR5C1Q8NGR4 320 aa13.58□□□□□ -0.24
PHGDH-202ENST00000369409 PHYHIPLQ96FC7 376 aa13.58□□□□□ -0.24
PHGDH-202ENST00000369409 AIFM2Q9BRQ8 373 aa13.58□□□□□ -0.24
PHGDH-202ENST00000369409 MS4A7Q9GZW8 240 aaPredicted RBP13.58□□□□□ -0.24
PHGDH-202ENST00000369409 PTPN13Q12923 2485 aa13.58□□□□□ -0.24
PHGDH-202ENST00000369409 CSMD2Q7Z408 3487 aa13.58□□□□□ -0.24
PHGDH-202ENST00000369409 A0A1W2PPI3 338 aa13.57□□□□□ -0.24
PHGDH-202ENST00000369409 LEUTXA8MZ59 168 aa13.57□□□□□ -0.24
PHGDH-202ENST00000369409 JTBO76095 146 aa13.57□□□□□ -0.24
PHGDH-202ENST00000369409 METTL15P1P0C7V9 234 aa13.57□□□□□ -0.24
PHGDH-202ENST00000369409 SULT1A1P50225 295 aa13.57□□□□□ -0.24
PHGDH-202ENST00000369409 DVL1P1P54792 670 aaPredicted RBP13.57□□□□□ -0.24
PHGDH-202ENST00000369409 SPCS3P61009 180 aa13.57□□□□□ -0.24
PHGDH-202ENST00000369409 NDUFA5Q16718 116 aa13.57□□□□□ -0.24
PHGDH-202ENST00000369409 LHFPL4Q7Z7J7 247 aa13.57□□□□□ -0.24
PHGDH-202ENST00000369409 TMEM14BQ9NUH8 114 aa13.57□□□□□ -0.24
PHGDH-202ENST00000369409 BET1LQ9NYM9 111 aa13.57□□□□□ -0.24
PHGDH-202ENST00000369409 DPM3Q9P2X0 92 aa13.57□□□□□ -0.24
PHGDH-202ENST00000369409 FOXA2Q9Y261 457 aaPredicted RBP13.57□□□□□ -0.24
PHGDH-202ENST00000369409 POLQO75417 2590 aa13.57□□□□□ -0.24
PHGDH-202ENST00000369409 TNCP24821 2201 aa13.57□□□□□ -0.24
PHGDH-202ENST00000369409 UPK2O00526 184 aa13.57□□□□□ -0.24
PHGDH-202ENST00000369409 IL6RP08887 468 aaPredicted RBP13.57□□□□□ -0.24
PHGDH-202ENST00000369409 MYOD1P15172 320 aa13.57□□□□□ -0.24
PHGDH-202ENST00000369409 S100A1P23297 94 aa13.57□□□□□ -0.24
PHGDH-202ENST00000369409 DSCR9P59020 149 aa13.57□□□□□ -0.24
PHGDH-202ENST00000369409 RAB14P61106 215 aa13.57□□□□□ -0.24
PHGDH-202ENST00000369409 EIF5AP63241 154 aaKnown RBP13.57□□□□□ -0.24
PHGDH-202ENST00000369409 CLEC12BQ2HXU8 276 aa13.57□□□□□ -0.24
PHGDH-202ENST00000369409 PUSL1Q8N0Z8 303 aaKnown RBP13.57□□□□□ -0.24
PHGDH-202ENST00000369409 CIB3Q96Q77 187 aaPredicted RBP13.57□□□□□ -0.24
PHGDH-202ENST00000369409 TBX15Q96SF7 602 aa13.57□□□□□ -0.24
PHGDH-202ENST00000369409 TCF19Q9Y242 345 aa13.57□□□□□ -0.24
PHGDH-202ENST00000369409 POLR3KQ9Y2Y1 108 aaPredicted RBP13.57□□□□□ -0.24
PHGDH-202ENST00000369409 BORCS7-ASMTA0A0B4J1R7 106 aa13.56□□□□□ -0.24
PHGDH-202ENST00000369409 KBTBD11O94819 623 aa13.56□□□□□ -0.24
PHGDH-202ENST00000369409 CEACAM3P40198 252 aa13.56□□□□□ -0.24
PHGDH-202ENST00000369409 CLLU1Q5K131 121 aa13.56□□□□□ -0.24
PHGDH-202ENST00000369409 UBAC2Q8NBM4 344 aa13.56□□□□□ -0.24
PHGDH-202ENST00000369409 OR52E5Q8NH55 327 aa13.56□□□□□ -0.24
PHGDH-202ENST00000369409 TMED6Q8WW62 240 aa13.56□□□□□ -0.24
PHGDH-202ENST00000369409 OR4C12Q96R67 309 aa13.56□□□□□ -0.24
PHGDH-202ENST00000369409 PRNDQ9UKY0 176 aa13.56□□□□□ -0.24
PHGDH-202ENST00000369409 HILPDAQ9Y5L2 63 aa13.56□□□□□ -0.24
PHGDH-202ENST00000369409 ABCA12Q86UK0 2595 aa13.56□□□□□ -0.24
PHGDH-202ENST00000369409 IGLV2-23P01705 113 aa13.55□□□□□ -0.24
PHGDH-202ENST00000369409 PDLIM3Q53GG5 364 aaPredicted RBP13.55□□□□□ -0.24
PHGDH-202ENST00000369409 HAPLN4Q86UW8 402 aa13.55□□□□□ -0.24
PHGDH-202ENST00000369409 OR1S2Q8NGQ3 325 aa13.55□□□□□ -0.24
PHGDH-202ENST00000369409 RITA1Q96K30 269 aa13.55□□□□□ -0.24
PHGDH-202ENST00000369409 OR51B2Q9Y5P1 312 aa13.55□□□□□ -0.24
PHGDH-202ENST00000369409 HELZ2Q9BYK8 2649 aaKnown RBP13.55□□□□□ -0.24
PHGDH-202ENST00000369409 TIMM23O14925 209 aa13.55□□□□□ -0.24
PHGDH-202ENST00000369409 PAX6P26367 422 aa13.55□□□□□ -0.24
PHGDH-202ENST00000369409 HOXA1P49639 335 aaPredicted RBP13.55□□□□□ -0.24
PHGDH-202ENST00000369409 HIST2H2BCQ6DN03 193 aa13.55□□□□□ -0.24
PHGDH-202ENST00000369409 TMEM14EPQ6UXP3 125 aa13.55□□□□□ -0.24
PHGDH-202ENST00000369409 CLCC1Q96S66 551 aa13.55□□□□□ -0.24
PHGDH-202ENST00000369409 STRAPQ9Y3F4 350 aaKnown RBP13.55□□□□□ -0.24
PHGDH-202ENST00000369409 SLC25A17O43808 307 aa13.54□□□□□ -0.24
PHGDH-202ENST00000369409 NMBP08949 121 aa13.54□□□□□ -0.24
PHGDH-202ENST00000369409 HSPE1P61604 102 aaKnown RBP13.54□□□□□ -0.24
PHGDH-202ENST00000369409 ARL16Q0P5N6 197 aa13.54□□□□□ -0.24
PHGDH-202ENST00000369409 ZNF266Q14584 549 aa13.54□□□□□ -0.24
PHGDH-202ENST00000369409 VMA21Q3ZAQ7 101 aa13.54□□□□□ -0.24
PHGDH-202ENST00000369409 VSTM2AQ8TAG5 236 aa13.54□□□□□ -0.24
PHGDH-202ENST00000369409 PSMG3-AS1Q96PY0 264 aa13.54□□□□□ -0.24
PHGDH-202ENST00000369409 CACFD1Q9UGQ2 172 aa13.54□□□□□ -0.24
PHGDH-202ENST00000369409 FBXO24O75426 580 aa13.53□□□□□ -0.24
PHGDH-202ENST00000369409 FGF2P09038 288 aa13.53□□□□□ -0.24
PHGDH-202ENST00000369409 SLC25A16P16260 332 aa13.53□□□□□ -0.24
PHGDH-202ENST00000369409 VDAC2P45880 294 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-202ENST00000369409 OR8G2PQ6IF36 304 aa13.53□□□□□ -0.24
PHGDH-202ENST00000369409 HSD17B11Q8NBQ5 300 aa13.53□□□□□ -0.24
PHGDH-202ENST00000369409 TMEM167AQ8TBQ9 72 aa13.53□□□□□ -0.24
PHGDH-202ENST00000369409 ATP5SQ99766 215 aa13.53□□□□□ -0.24
PHGDH-202ENST00000369409 HINT2Q9BX68 163 aa13.53□□□□□ -0.24
PHGDH-202ENST00000369409 HEYLQ9NQ87 328 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-202ENST00000369409 TPSG1Q9NRR2 321 aa13.53□□□□□ -0.24
PHGDH-202ENST00000369409 OPN1MWP04001 364 aa13.53□□□□□ -0.24
PHGDH-202ENST00000369409 OPN1MW2P0DN77 364 aa13.53□□□□□ -0.24
PHGDH-202ENST00000369409 OPN1MW3P0DN78 364 aa13.53□□□□□ -0.24
PHGDH-202ENST00000369409 USF1P22415 310 aaPredicted RBP13.53□□□□□ -0.24
PHGDH-202ENST00000369409 CNTFRP26992 372 aa13.53□□□□□ -0.24
PHGDH-202ENST00000369409 LGALS4P56470 323 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms