RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 MRGPRG-AS1Q2M3A8 158 aa11.85□□□□□ -0.51
SMPDL3A-201ENST00000368440 NSUN5P1Q3KNT7 163 aa11.85□□□□□ -0.51
SMPDL3A-201ENST00000368440 OR51H1Q8NH63 302 aa11.85□□□□□ -0.51
SMPDL3A-201ENST00000368440 SGMS2Q8NHU3 365 aa11.85□□□□□ -0.51
SMPDL3A-201ENST00000368440 GPN1Q9HCN4 374 aaPredicted RBP11.85□□□□□ -0.51
SMPDL3A-201ENST00000368440 G3V318 75 aa11.84□□□□□ -0.51
SMPDL3A-201ENST00000368440 CFHR3Q02985 330 aa11.84□□□□□ -0.51
SMPDL3A-201ENST00000368440 LHFPL1Q86WI0 220 aa11.84□□□□□ -0.51
SMPDL3A-201ENST00000368440 OR4X2Q8NGF9 303 aa11.84□□□□□ -0.51
SMPDL3A-201ENST00000368440 OSR1Q8TAX0 266 aaPredicted RBP11.84□□□□□ -0.51
SMPDL3A-201ENST00000368440 RANGRFQ9HD47 186 aaPredicted RBP11.84□□□□□ -0.51
SMPDL3A-201ENST00000368440 WSB1Q9Y6I7 421 aa11.84□□□□□ -0.51
SMPDL3A-201ENST00000368440 CREBL2O60519 120 aaPredicted RBP11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 OR4E1P0C645 316 aa11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 EGR2P11161 476 aaPredicted RBP11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 VAMP1P23763 118 aa11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 PHLDA2Q53GA4 152 aa11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 PRR31Q5SQ13 230 aa11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 LCNL1Q6ZST4 164 aa11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 PPP1R27Q86WC6 154 aa11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 VKORC1L1Q8N0U8 176 aa11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 OR4S2Q8NH73 311 aa11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 FAM103A1Q9BTL3 118 aaKnown RBP11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 A0A1W2PRX2 142 aa11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 M0QZ24 198 aa11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 GPR31O00270 319 aa11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 PGLYRP1O75594 196 aaPredicted RBP11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 IL5P05113 134 aa11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 SAA1P0DJI8 122 aaPredicted RBP11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 UBE2KP61086 200 aa11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 CATR1Q13166 79 aa11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 SPAG16Q8N0X2 631 aa11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 OR11H7Q8NGC8 314 aa11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 FYTTD1Q96QD9 318 aaKnown RBP11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 RSRP1Q9BUV0 290 aa11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 ZNF580Q9UK33 172 aa11.83□□□□□ -0.52
SMPDL3A-201ENST00000368440 TCRBV4S1A1TA0A5B7 111 aa11.82□□□□□ -0.52
SMPDL3A-201ENST00000368440 HLA-AP01891 365 aaKnown RBP11.82□□□□□ -0.52
SMPDL3A-201ENST00000368440 CXCL3P19876 107 aa11.82□□□□□ -0.52
SMPDL3A-201ENST00000368440 VDAC1P21796 283 aa11.82□□□□□ -0.52
SMPDL3A-201ENST00000368440 MECP2P51608 486 aaKnown RBP11.82□□□□□ -0.52
SMPDL3A-201ENST00000368440 SLC35B1P78383 322 aa11.82□□□□□ -0.52
SMPDL3A-201ENST00000368440 PPP1R1AQ13522 171 aa11.82□□□□□ -0.52
SMPDL3A-201ENST00000368440 ECSCRQ19T08 205 aa11.82□□□□□ -0.52
SMPDL3A-201ENST00000368440 VMA21Q3ZAQ7 101 aa11.82□□□□□ -0.52
SMPDL3A-201ENST00000368440 NDUFA11Q86Y39 141 aa11.82□□□□□ -0.52
SMPDL3A-201ENST00000368440 ABHD5Q8WTS1 349 aa11.82□□□□□ -0.52
SMPDL3A-201ENST00000368440 CASTOR1Q8WTX7 329 aa11.82□□□□□ -0.52
SMPDL3A-201ENST00000368440 ST6GAL2Q96JF0 529 aa11.82□□□□□ -0.52
SMPDL3A-201ENST00000368440 C5orf66Q9H5L9 145 aa11.82□□□□□ -0.52
SMPDL3A-201ENST00000368440 PPIFP30405 207 aaKnown RBP11.81□□□□□ -0.52
SMPDL3A-201ENST00000368440 KIR2DS2P43631 304 aa11.81□□□□□ -0.52
SMPDL3A-201ENST00000368440 UCP3P55916 312 aa11.81□□□□□ -0.52
SMPDL3A-201ENST00000368440 GNB1P62873 340 aa11.81□□□□□ -0.52
SMPDL3A-201ENST00000368440 C2orf68Q2NKX9 166 aa11.81□□□□□ -0.52
SMPDL3A-201ENST00000368440 C19orf54Q5BKX5 351 aa11.81□□□□□ -0.52
SMPDL3A-201ENST00000368440 KHDC1LQ5JSQ8 128 aa11.81□□□□□ -0.52
SMPDL3A-201ENST00000368440 ZNF562Q6V9R5 426 aa11.81□□□□□ -0.52
SMPDL3A-201ENST00000368440 SLC25A42Q86VD7 318 aa11.81□□□□□ -0.52
SMPDL3A-201ENST00000368440 TEX45Q8NA69 505 aa11.81□□□□□ -0.52
SMPDL3A-201ENST00000368440 GPR132Q9UNW8 380 aa11.81□□□□□ -0.52
SMPDL3A-201ENST00000368440 TRAV41A0A0B4J266 112 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 SMLR1H3BR10 107 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 TRAPPC2P0DI81 140 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 TRAPPC2BP0DI82 140 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 EIF2B2P49770 351 aaKnown RBP11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 CRIP2P52943 208 aaPredicted RBP11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 DHRS2Q13268 280 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 FXYD3Q14802 87 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 C18orf65Q6ZTR6 163 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 SSX9Q7RTT3 188 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 SLC38A6Q8IZM9 456 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 GRPEL2Q8TAA5 225 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 ZNF431Q8TF32 576 aaPredicted RBP11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 ARPC1AQ92747 370 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 RTBDNQ9BSG5 229 aaPredicted RBP11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 PRR13Q9NZ81 148 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 MGAT4CQ9UBM8 478 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 C14orf166Q9Y224 244 aaKnown RBP11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 RBFOX2O43251 390 aaKnown RBP eCLIP11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 SOX15O60248 233 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 S1PR2O95136 353 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 IGHG4P01861 327 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 RPLP1P05386 114 aaKnown RBP11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 NKX2-5P52952 324 aaPredicted RBP11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 PRSS8Q16651 343 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 LPCAT3Q6P1A2 487 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 TEX38Q6PEX7 206 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 CMTM1Q8IZ96 169 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 SCGB3A2Q96PL1 93 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 GON7Q9BXV9 100 aa11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 ZNF430Q9H8G1 570 aaPredicted RBP11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 TSSC4Q9Y5U2 329 aaPredicted RBP11.8□□□□□ -0.52
SMPDL3A-201ENST00000368440 SNRPGP15A8MWD9 76 aa11.79□□□□□ -0.52
SMPDL3A-201ENST00000368440 SIX6O95475 246 aa11.79□□□□□ -0.52
SMPDL3A-201ENST00000368440 TREML4Q6UXN2 200 aa11.79□□□□□ -0.52
SMPDL3A-201ENST00000368440 TBC1D26Q86UD7 250 aa11.79□□□□□ -0.52
SMPDL3A-201ENST00000368440 PUSL1Q8N0Z8 303 aaKnown RBP11.79□□□□□ -0.52
SMPDL3A-201ENST00000368440 COMMD1Q8N668 190 aa11.79□□□□□ -0.52
SMPDL3A-201ENST00000368440 LFNGQ8NES3 379 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms