RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 DDTP30046 118 aa10.27□□□□□ -0.76
CDC42BPA-203ENST00000366766 STPG1Q5TH74 334 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 TBX15Q96SF7 602 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 SLC35B1P78383 322 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 PPP1R32Q7Z5V6 425 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 GPR146Q96CH1 333 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 CLEC7AQ9BXN2 247 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 SRXN1Q9BYN0 137 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 IL36RNQ9UBH0 155 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 C17orf51A8MQB3 221 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 GPR6P46095 362 aaPredicted RBP10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 SAPCD1Q5SSQ6 148 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 VN1R17PQ8TDU5 208 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 RNF115Q9Y4L5 304 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 A0A1W2PQM1 296 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 TRGC2P03986 189 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 PAPPA-AS1Q5QFB9 102 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 TMEM189A5PLL7 270 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 RBFOX2O43251 390 aaKnown RBP eCLIP10.27□□□□□ -0.779e-6■■□□□ 11.7
CDC42BPA-203ENST00000366766 AGFG2O95081 481 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 MFAP4P55083 255 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 RCC1LQ96I51 464 aaKnown RBP10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 THSD7BQ9C0I4 1608 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 EML6Q6ZMW3 1958 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 SPANXN1Q5VSR9 72 aa10.27□□□□□ -0.77
CDC42BPA-203ENST00000366766 LINC00271P0C7V0 271 aa10.26□□□□□ -0.77
CDC42BPA-203ENST00000366766 SS18L1O75177 396 aaPredicted RBP10.26□□□□□ -0.77
CDC42BPA-203ENST00000366766 C3AR1Q16581 482 aa10.26□□□□□ -0.77
CDC42BPA-203ENST00000366766 IMMP1LQ96LU5 166 aa10.26□□□□□ -0.77
CDC42BPA-203ENST00000366766 PARLQ9H300 379 aa10.26□□□□□ -0.77
CDC42BPA-203ENST00000366766 LRTM2Q8N967 370 aa10.26□□□□□ -0.77
CDC42BPA-203ENST00000366766 OR10J6PQ8NGY7 276 aa10.26□□□□□ -0.77
CDC42BPA-203ENST00000366766 PRSS12P56730 875 aa10.26□□□□□ -0.77
CDC42BPA-203ENST00000366766 C1QL1O75973 258 aa10.26□□□□□ -0.77
CDC42BPA-203ENST00000366766 SPG11Q96JI7 2443 aa10.26□□□□□ -0.77
CDC42BPA-203ENST00000366766 SIAH2O43255 324 aa10.26□□□□□ -0.77
CDC42BPA-203ENST00000366766 IGHV3-13P01766 116 aa10.26□□□□□ -0.77
CDC42BPA-203ENST00000366766 IGHV3-7P01780 117 aa10.26□□□□□ -0.77
CDC42BPA-203ENST00000366766 RNASEH2CQ8TDP1 164 aaKnown RBP10.26□□□□□ -0.77
CDC42BPA-203ENST00000366766 NEUROG3Q9Y4Z2 214 aa10.26□□□□□ -0.77
CDC42BPA-203ENST00000366766 RELQ04864 619 aaPredicted RBP10.26□□□□□ -0.77
CDC42BPA-203ENST00000366766 DRAM1Q8N682 238 aa10.26□□□□□ -0.77
CDC42BPA-203ENST00000366766 TRAV34A0A0B4J273 112 aa10.26□□□□□ -0.77
CDC42BPA-203ENST00000366766 ACP7Q6ZNF0 438 aa10.26□□□□□ -0.77
CDC42BPA-203ENST00000366766 NPCDR1Q9BY65 106 aa10.26□□□□□ -0.77
CDC42BPA-203ENST00000366766 TCTAP57738 103 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 LINC00518Q8N0U6 118 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 ITLN1Q8WWA0 313 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 SRSF9Q13242 221 aaKnown RBP eCLIP10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 CCL21O00585 134 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 LEPROTL1O95214 131 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 LIPFP07098 398 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 FAM89BQ8N5H3 189 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 IMMP2LQ96T52 175 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 IGHV3OR15-7A0A075B7D8 119 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 LOC102723996A0A087X1L8 192 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 LNP1A1A4G5 178 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 RECKO95980 971 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 EFEMP2O95967 443 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 CCL8P80075 99 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 FAM131CQ96AQ9 280 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 CCL13Q99616 98 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 PCGF1Q9BSM1 259 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 ZNF106Q9H2Y7 1883 aaKnown RBP10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 FAM157AC9JC47 383 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 NUBP1P53384 320 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 DLX1P56177 255 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 MEF2CQ06413 473 aaPredicted RBP10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 CLEC2AQ6UVW9 174 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 HSPB9Q9BQS6 159 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 SMOC1Q9H4F8 434 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 SMUG1Q53HV7 270 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 MRPL18Q9H0U6 180 aaKnown RBP10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 IFITM10A6NMD0 228 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 CSN3P07498 182 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 MAS1LP35410 378 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 ZNF488Q96MN9 340 aa10.25□□□□□ -0.77
CDC42BPA-203ENST00000366766 F8VVB4 439 aa10.24□□□□□ -0.77
CDC42BPA-203ENST00000366766 F8VWA3 439 aa10.24□□□□□ -0.77
CDC42BPA-203ENST00000366766 TBX6O95947 436 aaPredicted RBP10.24□□□□□ -0.77
CDC42BPA-203ENST00000366766 ZP1P60852 638 aa10.24□□□□□ -0.77
CDC42BPA-203ENST00000366766 LAMTOR1Q6IAA8 161 aa10.24□□□□□ -0.77
CDC42BPA-203ENST00000366766 TWIST1Q15672 202 aa10.24□□□□□ -0.77
CDC42BPA-203ENST00000366766 RNFT1Q5M7Z0 435 aa10.24□□□□□ -0.77
CDC42BPA-203ENST00000366766 MIC13Q5XKP0 118 aa10.24□□□□□ -0.77
CDC42BPA-203ENST00000366766 PRNTQ86SH4 94 aa10.24□□□□□ -0.77
CDC42BPA-203ENST00000366766 ZNF207O43670 478 aaKnown RBP10.24□□□□□ -0.77
CDC42BPA-203ENST00000366766 TRGC1P0CF51 173 aa10.24□□□□□ -0.77
CDC42BPA-203ENST00000366766 TSPOP30536 169 aa10.24□□□□□ -0.77
CDC42BPA-203ENST00000366766 CKS2P33552 79 aa10.24□□□□□ -0.77
CDC42BPA-203ENST00000366766 TMEM177Q53S58 311 aa10.24□□□□□ -0.77
CDC42BPA-203ENST00000366766 ZIC3O60481 467 aa10.24□□□□□ -0.77
CDC42BPA-203ENST00000366766 MYO18BQ8IUG5 2567 aa10.24□□□□□ -0.77
CDC42BPA-203ENST00000366766 KIAA1671Q9BY89 1806 aa10.24□□□□□ -0.77
CDC42BPA-203ENST00000366766 SHISA3A0PJX4 238 aa10.24□□□□□ -0.77
CDC42BPA-203ENST00000366766 PATE3B3GLJ2 98 aa10.24□□□□□ -0.77
CDC42BPA-203ENST00000366766 HLA-DRB1P01911 266 aa10.24□□□□□ -0.77
CDC42BPA-203ENST00000366766 FAM209BQ5JX69 171 aa10.24□□□□□ -0.77
CDC42BPA-203ENST00000366766 MS4A3Q96HJ5 214 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms