RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 ID3Q02535 119 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 ZCCHC14Q8WYQ9 949 aaKnown RBP10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 ZNF488Q96MN9 340 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 IL17BQ9UHF5 180 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 NDUFA2O43678 99 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 CEACAM1P13688 526 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 NDUFAF3Q9BU61 184 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 MS4A5Q9H3V2 200 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 SLC25A10Q9UBX3 287 aaPredicted RBP10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 LINC00869P0C866 280 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 OR4C13Q8NGP0 309 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 ZIC3O60481 467 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 TNXAQ16473 311 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 TMEM74BQ9NUR3 256 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 CALYQ9NYX4 217 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 IGKV1-9A0A0C4DH69 117 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 CCL17Q92583 94 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 ONECUT1Q9UBC0 465 aa10.05□□□□□ -0.8
CDC42BPA-202ENST00000366764 RBFOX2O43251 390 aaKnown RBP eCLIP10.04□□□□□ -0.89e-6■■□□□ 11.7
CDC42BPA-202ENST00000366764 GNG7O60262 68 aa10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 NPBWR2P48146 333 aa10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 RPS20P60866 119 aaKnown RBP10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 Q8WTZ3 238 aa10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 AURKAIP1Q9NWT8 199 aaPredicted RBP10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 SHISA7A6NL88 538 aa10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 MST1P26927 711 aa10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 SPRED2Q7Z698 418 aa10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 S1PR2O95136 353 aa10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 SUPT4H1P63272 117 aaKnown RBP10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 C5orf17Q8NAS9 161 aa10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 MBD3L1Q8WWY6 194 aa10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 GCHFRP30047 84 aa10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 ZNF714Q96N38 554 aa10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 Q6ZS49 121 aa10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 FAM131CQ96AQ9 280 aa10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 SLC25A33Q9BSK2 321 aa10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 TRIP6Q15654 476 aaKnown RBP10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 CACNG8Q8WXS5 425 aa10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 PTPN13Q12923 2485 aa10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 BTF3P20290 206 aaKnown RBP10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 WDR25Q64LD2 544 aaPredicted RBP10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 A0A1B0GW15 77 aa10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 OR10S1Q8NGN2 331 aa10.04□□□□□ -0.8
CDC42BPA-202ENST00000366764 TRAV39A0A0B4J263 110 aa10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 Q6ZT83 130 aa10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 ZNF525Q8N782 197 aa10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 IMMP1LQ96LU5 166 aa10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 IGKV1D-43A0A0B4J1Z2 117 aa10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 RAMP1O60894 148 aa10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 ACSF3Q4G176 576 aaPredicted RBP10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 SLC25A34Q6PIV7 304 aa10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 SPNS3Q6ZMD2 512 aa10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 PILRBQ9UKJ0 227 aa10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 DHRS13Q6UX07 377 aa10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 INSIG2Q9Y5U4 225 aa10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 KLF14Q8TD94 323 aaPredicted RBP10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 TMEM170AQ8WVE7 144 aa10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 ASCL3Q9NQ33 180 aa10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 ZNF883P0CG24 379 aa10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 MRPL52Q86TS9 123 aaKnown RBP10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 OR51G1Q8NGK1 321 aa10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 CD3EP07766 207 aa10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 CELA2AP08217 269 aa10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 QRFPP83859 136 aa10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 C11orf42Q8N5U0 333 aa10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 DEFB123Q8N688 67 aa10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 VWCEQ96DN2 955 aa10.03□□□□□ -0.8
CDC42BPA-202ENST00000366764 WDYHV1Q96HA8 205 aa10.02□□□□□ -0.8
CDC42BPA-202ENST00000366764 CYTL1Q9NRR1 136 aa10.02□□□□□ -0.8
CDC42BPA-202ENST00000366764 LINC00587B1AMM8 73 aa10.02□□□□□ -0.8
CDC42BPA-202ENST00000366764 M0QZ24 198 aa10.02□□□□□ -0.8
CDC42BPA-202ENST00000366764 TM4SF5O14894 197 aa10.02□□□□□ -0.8
CDC42BPA-202ENST00000366764 CIDEAO60543 219 aa10.02□□□□□ -0.8
CDC42BPA-202ENST00000366764 RPL13AP40429 203 aaKnown RBP10.02□□□□□ -0.8
CDC42BPA-202ENST00000366764 LGALS7P47929 136 aa10.02□□□□□ -0.8
CDC42BPA-202ENST00000366764 ZG16O60844 167 aa10.02□□□□□ -0.81
CDC42BPA-202ENST00000366764 LEPROTL1O95214 131 aa10.02□□□□□ -0.81
CDC42BPA-202ENST00000366764 HERVK_113P61574 105 aa10.02□□□□□ -0.81
CDC42BPA-202ENST00000366764 CENPWQ5EE01 88 aa10.02□□□□□ -0.81
CDC42BPA-202ENST00000366764 IL36BQ9NZH7 164 aa10.02□□□□□ -0.81
CDC42BPA-202ENST00000366764 LOC102723996A0A087X1L8 192 aa10.02□□□□□ -0.81
CDC42BPA-202ENST00000366764 A0A1W2PQM1 296 aa10.02□□□□□ -0.81
CDC42BPA-202ENST00000366764 TNRC6AQ8NDV7 1962 aaKnown RBP10.02□□□□□ -0.81
CDC42BPA-202ENST00000366764 C16orf97H3BN30 126 aa10.02□□□□□ -0.81
CDC42BPA-202ENST00000366764 CLDN18P56856 261 aa10.02□□□□□ -0.81
CDC42BPA-202ENST00000366764 ZNF703Q9H7S9 590 aaPredicted RBP10.02□□□□□ -0.81
CDC42BPA-202ENST00000366764 GOSR1O95249 250 aa10.02□□□□□ -0.81
CDC42BPA-202ENST00000366764 HLA-DRB1P01911 266 aa10.02□□□□□ -0.81
CDC42BPA-202ENST00000366764 FOXD3Q9UJU5 478 aaPredicted RBP10.02□□□□□ -0.81
CDC42BPA-202ENST00000366764 PRSS1P07477 247 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 SRIP30626 198 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 KRTCAP3Q53RY4 240 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 DNM1P46Q6ZS02 220 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 OR8B3Q8NGG8 313 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 OR8B2Q96RD0 313 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 PPP1R32Q7Z5V6 425 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 OR10AG1Q8NH19 301 aa10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 CDX2Q99626 313 aaPredicted RBP10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 TLN1Q9Y490 2541 aaKnown RBP10.01□□□□□ -0.81
CDC42BPA-202ENST00000366764 TMEM238LA0A1B0GVL6 79 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms