RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 CHRDL1Q9BU40 450 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 YTHDF1Q9BYJ9 559 aaKnown RBP6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 SELENOIQ9C0D9 397 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 CSTL1Q9H114 145 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 STEAP1Q9UHE8 339 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 EXOGQ9Y2C4 368 aaKnown RBP6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 FAT1Q14517 4588 aa6.14□□□□□ -1.43
HMGB1P39-201ENST00000366304 A0A087WXM4 84 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 IGHV3-35A0A0C4DH35 117 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 IGKV1-6A0A0C4DH72 117 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 HMX3A6NHT5 357 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 TEX22C9J3V5 150 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 E7EUB6 86 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 M0R1X1 148 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 ITGB1BP1O14713 200 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 TSPAN4O14817 238 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 NOL3O60936 208 aaKnown RBP6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 ZNF780AO75290 641 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 PDCD6O75340 191 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 NAPSAO96009 420 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 GLAP06280 429 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 SMIM18P0DKX4 95 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 MGMTP16455 207 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 BDKRB2P30411 391 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 AP2S1P53680 142 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 OXA1LQ15070 435 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 TNXAQ16473 311 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 KRTAP19-4Q3LI73 84 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 RBPMS2Q6ZRY4 209 aaKnown RBP6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 ZNF767PQ75MW2 155 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 CEACAM19Q7Z692 300 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 TTC9CQ8N5M4 171 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 OR8J1Q8NGP2 316 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 CD300LFQ8TDQ1 290 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 GALNT14Q96FL9 552 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 ZNF486Q96H40 463 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 SPAG8Q99932 426 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 HDHD3Q9BSH5 251 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 WDR12Q9GZL7 423 aaKnown RBP6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 C5orf66Q9H5L9 145 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 SCPEP1Q9HB40 452 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 SLC35D1Q9NTN3 355 aa6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 EXOSC1Q9Y3B2 195 aaKnown RBP6.13□□□□□ -1.43
HMGB1P39-201ENST00000366304 IGHV4-28A0A0C4DH34 117 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 MFSD2BA6NFX1 497 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 MPTX1A8MV57 137 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 C11orf94C9JXX5 98 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 G3V2T6 193 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 AMBPP02760 352 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 GIG44P09565 113 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 CEACAM6P40199 344 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 ETV1P50549 477 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 MRPL28Q13084 256 aaKnown RBP6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 KCTD21Q4G0X4 260 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 PVRIGQ6DKI7 326 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 Q6ZRM9 215 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 C6orf201Q7Z4U5 140 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 AMIGO2Q86SJ2 522 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 SLC38A6Q8IZM9 456 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 SYS1Q8N2H4 156 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 TSPAN14Q8NG11 270 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 OR4A5Q8NH83 315 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 RFKQ969G6 155 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 PTX4Q96A99 478 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 CENPNQ96H22 339 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 ZNF414Q96IQ9 312 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 HARBI1Q96MB7 349 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 S100A13Q99584 98 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 RNF126Q9BV68 326 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 HRH4Q9H3N8 390 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 ZNF430Q9H8G1 570 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 PAK1IP1Q9NWT1 392 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 CELA1Q9UNI1 258 aa6.12□□□□□ -1.43
HMGB1P39-201ENST00000366304 FLG2Q5D862 2391 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 TRAV10A0A0B4J240 114 aa6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 MPPED1O15442 326 aa6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 CRTAPO75718 401 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 APOA2P02652 100 aa6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 CD74P04233 296 aa6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 IL6RP08887 468 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 SCTP09683 121 aa6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 SSTP61278 116 aa6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 PPP3R1P63098 170 aa6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 FAM106AQ4KMX7 169 aa6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 OGFRL1Q5TC84 451 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 OR10K2Q6IF99 312 aa6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 SETD9Q8NE22 299 aa6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 GPR148Q8TDV2 347 aa6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 ANAPC16Q96DE5 110 aa6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 GABARAPL3Q9BY60 117 aa6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 GABARAPL1Q9H0R8 117 aa6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 KCNK15Q9H427 330 aa6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 MRPL27Q9P0M9 148 aaKnown RBP6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 ABRACLQ9P1F3 81 aa6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 OAZ3Q9UMX2 235 aa6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 VPS13BQ7Z7G8 4022 aa6.11□□□□□ -1.43
HMGB1P39-201ENST00000366304 IGHV3OR16-8A0A075B7F1 116 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 A0A0A6YYD4 124 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 CD3GP09693 182 aa6.1□□□□□ -1.43
HMGB1P39-201ENST00000366304 P0DMU3 169 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms