RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 ELOBQ15370 118 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 C1orf174Q8IYL3 243 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 MRGPRDQ8TDS7 321 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 CA5BP1Q8WTZ4 195 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 PINX1Q96BK5 328 aaKnown RBP6.03□□□□□ -1.44
CLCN3-202ENST00000360642 STARD4Q96DR4 205 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 NIPSNAP3BQ9BS92 247 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 MRPL37Q9BZE1 423 aaKnown RBP6.03□□□□□ -1.44
CLCN3-202ENST00000360642 ZNF665Q9H7R5 613 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 MSL2Q9HCI7 577 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 SIRT7Q9NRC8 400 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-202ENST00000360642 GNG13Q9P2W3 67 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 S1PR2O95136 353 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 CLDN14O95500 239 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 KRASP01116 189 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 S100A6P06703 90 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 FABP6P51161 128 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 HTD2P86397 168 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 SLC38A11Q08AI6 406 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 CATR1Q13166 79 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 SMIM21Q3B7S5 101 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 ZNF718Q3SXZ3 478 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 CD177Q8N6Q3 437 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 OR13A1Q8NGR1 328 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 P2RX4Q99571 388 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 FZR1Q9UM11 496 aa6.03□□□□□ -1.44
CLCN3-202ENST00000360642 B4DEV8 164 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 RAB29O14966 203 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 CEACAM4O75871 244 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 IGKV1D-33P01593 117 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 IGKV1-33P01594 117 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 S100A8P05109 93 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 SSTR5P35346 364 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 GABRA2P47869 451 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 CEBPGP53567 150 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 OR2B8PP59922 312 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 ZNF816Q0VGE8 651 aaPredicted RBP6.02□□□□□ -1.45
CLCN3-202ENST00000360642 FABP9Q0Z7S8 132 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 LCN15Q6UWW0 184 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 ZNF66Q6ZN08 573 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 RPP25LQ8N5L8 163 aaKnown RBP6.02□□□□□ -1.45
CLCN3-202ENST00000360642 DEFB124Q8NES8 71 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 Q8WTZ3 238 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 RND1Q92730 232 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 PARD6AQ9NPB6 346 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 UFSP2Q9NUQ7 469 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 OR5H1A6NKK0 313 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 USP17L23D6RBM5 183 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 ZNF737O75373 536 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 CLDN1O95832 211 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 IFNA17P01571 189 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 CD55P08174 381 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 MDKP21741 143 aaPredicted RBP6.02□□□□□ -1.45
CLCN3-202ENST00000360642 FGF8P55075 233 aaPredicted RBP6.02□□□□□ -1.45
CLCN3-202ENST00000360642 P2RY6Q15077 328 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 ATP6V1FQ16864 119 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 VWC2Q2TAL6 325 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 OR2B11Q5JQS5 317 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 BTNL3Q6UXE8 466 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 RBMS3Q6XE24 437 aaKnown RBP6.02□□□□□ -1.45
CLCN3-202ENST00000360642 MRGPRGQ86SM5 289 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 TPRX1Q8N7U7 411 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 TAAR6Q96RI8 345 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 TMEM242Q9NWH2 141 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 SLC25A15Q9Y619 301 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 CACNA1DQ01668 2161 aa6.02□□□□□ -1.45
CLCN3-202ENST00000360642 CEP250Q9BV73 2442 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 ICE1Q9Y2F5 2266 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 UBE2L5PA0A1B0GUS4 154 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 SPAARA0A1B0GVQ0 90 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 ZFP92A6NM28 416 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 DIRC3C9JPN6 131 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 PROP1O75360 226 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 CXCL1P09341 107 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 SMIM6P0DI80 62 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 CFHR2P36980 270 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 S100A12P80511 92 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 AARDQ4LEZ3 155 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 CST9LP1Q5W188 147 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 TCTEX1D2Q8WW35 142 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 HSD17B10Q99714 261 aaKnown RBP6.01□□□□□ -1.45
CLCN3-202ENST00000360642 SSBP3Q9BWW4 388 aaPredicted RBP6.01□□□□□ -1.45
CLCN3-202ENST00000360642 OPN3Q9H1Y3 402 aaPredicted RBP6.01□□□□□ -1.45
CLCN3-202ENST00000360642 CLN8Q9UBY8 286 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 VAX2Q9UIW0 290 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 LAMP3Q9UQV4 416 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 PTPRBP23467 1997 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 ADGRG4Q8IZF6 3080 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 RELNP78509 3460 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 MAP1LC3B2A6NCE7 125 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 ZG16O60844 167 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 PRDX2P32119 198 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 LINC00205P59089 165 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 RAB11AP62491 216 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 CTAG1AP78358 180 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 PNRC1Q12796 327 aaPredicted RBP6.01□□□□□ -1.45
CLCN3-202ENST00000360642 OR8G2PQ6IF36 304 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 ZNF343Q6P1L6 599 aa6.01□□□□□ -1.45
CLCN3-202ENST00000360642 BHLHA15Q7RTS1 189 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms