RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 TFF3Q07654 80 aa13.78□□□□□ -0.2
SCAF1-201ENST00000360565 FAM27E3Q08E93 113 aa13.78□□□□□ -0.2
SCAF1-201ENST00000360565 VAMP3Q15836 100 aa13.78□□□□□ -0.2
SCAF1-201ENST00000360565 OR8I2Q8N0Y5 310 aa13.78□□□□□ -0.2
SCAF1-201ENST00000360565 OR1P1Q8NH06 330 aa13.78□□□□□ -0.2
SCAF1-201ENST00000360565 GTF3AQ92664 365 aaKnown RBP13.78□□□□□ -0.2
SCAF1-201ENST00000360565 OR51M1Q9H341 326 aa13.78□□□□□ -0.2
SCAF1-201ENST00000360565 PCNX2A6NKB5 2137 aa13.78□□□□□ -0.2
SCAF1-201ENST00000360565 IGHV2OR16-5A0A0B4J2B6 119 aa13.78□□□□□ -0.2
SCAF1-201ENST00000360565 RTP5Q14D33 572 aa13.78□□□□□ -0.2
SCAF1-201ENST00000360565 BMPERQ8N8U9 685 aa13.78□□□□□ -0.2
SCAF1-201ENST00000360565 FAM222BQ8WU58 562 aa13.78□□□□□ -0.2
SCAF1-201ENST00000360565 WDR87Q6ZQQ6 2873 aa13.77□□□□□ -0.2
SCAF1-201ENST00000360565 GFRA1P56159 465 aa13.77□□□□□ -0.2
SCAF1-201ENST00000360565 CLDND2Q8NHS1 167 aa13.77□□□□□ -0.2
SCAF1-201ENST00000360565 VN1R17PQ8TDU5 208 aa13.77□□□□□ -0.2
SCAF1-201ENST00000360565 IQCF6A8MYZ5 107 aa13.77□□□□□ -0.21
SCAF1-201ENST00000360565 HIST1H1BP16401 226 aaKnown RBP13.77□□□□□ -0.21
SCAF1-201ENST00000360565 RND2P52198 227 aa13.77□□□□□ -0.21
SCAF1-201ENST00000360565 DIRC2Q96SL1 478 aa13.77□□□□□ -0.21
SCAF1-201ENST00000360565 PLXNB3Q9ULL4 1909 aa13.77□□□□□ -0.21
SCAF1-201ENST00000360565 M0R2Z0 102 aa13.77□□□□□ -0.21
SCAF1-201ENST00000360565 TIMM23BQ5SRD1 257 aa13.77□□□□□ -0.21
SCAF1-201ENST00000360565 M0R143 59 aa13.76□□□□□ -0.21
SCAF1-201ENST00000360565 CRYBB3P26998 211 aa13.76□□□□□ -0.21
SCAF1-201ENST00000360565 CFPP27918 469 aa13.76□□□□□ -0.21
SCAF1-201ENST00000360565 RNF24Q9Y225 148 aa13.76□□□□□ -0.21
SCAF1-201ENST00000360565 TANC1Q9C0D5 1861 aa13.76□□□□□ -0.21
SCAF1-201ENST00000360565 TICRRQ7Z2Z1 1910 aa13.76□□□□□ -0.21
SCAF1-201ENST00000360565 DOCK11Q5JSL3 2073 aa13.76□□□□□ -0.21
SCAF1-201ENST00000360565 HYPMO75409 117 aa13.76□□□□□ -0.21
SCAF1-201ENST00000360565 CD55P08174 381 aa13.76□□□□□ -0.21
SCAF1-201ENST00000360565 HIST1H1EP10412 219 aaKnown RBP13.76□□□□□ -0.21
SCAF1-201ENST00000360565 HGFACQ04756 655 aa13.76□□□□□ -0.21
SCAF1-201ENST00000360565 TBX15Q96SF7 602 aa13.76□□□□□ -0.21
SCAF1-201ENST00000360565 FCER1GP30273 86 aa13.76□□□□□ -0.21
SCAF1-201ENST00000360565 MC5RP33032 325 aa13.76□□□□□ -0.21
SCAF1-201ENST00000360565 TMUB1Q9BVT8 246 aa13.76□□□□□ -0.21
SCAF1-201ENST00000360565 CCL21O00585 134 aa13.76□□□□□ -0.21
SCAF1-201ENST00000360565 ACAA1P09110 424 aaPredicted RBP13.76□□□□□ -0.21
SCAF1-201ENST00000360565 SELENOTP62341 195 aa13.76□□□□□ -0.21
SCAF1-201ENST00000360565 ZNF729A6NN14 1252 aaPredicted RBP13.75□□□□□ -0.21
SCAF1-201ENST00000360565 CD5P06127 495 aa13.75□□□□□ -0.21
SCAF1-201ENST00000360565 S100A4P26447 101 aaKnown RBP13.75□□□□□ -0.21
SCAF1-201ENST00000360565 CD81P60033 236 aa13.75□□□□□ -0.21
SCAF1-201ENST00000360565 CYP2G1PQ6ZSU1 146 aa13.75□□□□□ -0.21
SCAF1-201ENST00000360565 STPG3Q8N7X2 389 aa13.75□□□□□ -0.21
SCAF1-201ENST00000360565 WFIKKN1Q96NZ8 548 aa13.75□□□□□ -0.21
SCAF1-201ENST00000360565 NABP2Q9BQ15 211 aa13.75□□□□□ -0.21
SCAF1-201ENST00000360565 WASHC3Q9Y3C0 194 aa13.75□□□□□ -0.21
SCAF1-201ENST00000360565 ZFHX2Q9C0A1 2572 aaPredicted RBP13.75□□□□□ -0.21
SCAF1-201ENST00000360565 TMEM42Q69YG0 159 aa13.75□□□□□ -0.21
SCAF1-201ENST00000360565 ZNF324BQ6AW86 544 aaPredicted RBP13.75□□□□□ -0.21
SCAF1-201ENST00000360565 ZNF497Q6ZNH5 498 aa13.75□□□□□ -0.21
SCAF1-201ENST00000360565 TRBV23-1A0A0A0MS06 115 aa13.75□□□□□ -0.21
SCAF1-201ENST00000360565 CDX4O14627 284 aaPredicted RBP13.75□□□□□ -0.21
SCAF1-201ENST00000360565 RAMP3O60896 148 aa13.75□□□□□ -0.21
SCAF1-201ENST00000360565 ZNF137PP52743 207 aa13.75□□□□□ -0.21
SCAF1-201ENST00000360565 SRSF4Q08170 494 aaKnown RBP13.75□□□□□ -0.21
SCAF1-201ENST00000360565 IBA57Q5T440 356 aaKnown RBP13.75□□□□□ -0.21
SCAF1-201ENST00000360565 FAM216BQ8N7L0 139 aa13.75□□□□□ -0.21
SCAF1-201ENST00000360565 STARD4Q96DR4 205 aa13.75□□□□□ -0.21
SCAF1-201ENST00000360565 RRHO14718 337 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 CA2P00918 260 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 ICAM4Q14773 271 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 FXYD3Q14802 87 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 WDFY1Q8IWB7 410 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 HSPB9Q9BQS6 159 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 SFXN3Q9BWM7 321 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 SPRR3Q9UBC9 169 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 RFNGQ9Y644 331 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 APCSP02743 223 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 C8orf88P0DMB2 117 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 B3GALT5-AS1P59052 145 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 FAM209BQ5JX69 171 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 C1orf162Q8NEQ5 155 aaPredicted RBP13.74□□□□□ -0.21
SCAF1-201ENST00000360565 SPSB4Q96A44 273 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 GGACTQ9BVM4 153 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 HILPDAQ9Y5L2 63 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 DLL1O00548 723 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 NAPSAO96009 420 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 Q6ZN92 141 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 Q8WTZ3 238 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 C1orf147Q96MC9 270 aaPredicted RBP13.74□□□□□ -0.21
SCAF1-201ENST00000360565 DNAJC4Q9NNZ3 241 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 COA4Q9NYJ1 87 aa13.74□□□□□ -0.21
SCAF1-201ENST00000360565 ELOBQ15370 118 aa13.73□□□□□ -0.21
SCAF1-201ENST00000360565 ACSF3Q4G176 576 aaPredicted RBP13.73□□□□□ -0.21
SCAF1-201ENST00000360565 MMD2Q8IY49 270 aa13.73□□□□□ -0.21
SCAF1-201ENST00000360565 TNFRSF19Q9NS68 423 aa13.73□□□□□ -0.21
SCAF1-201ENST00000360565 GCHFRP30047 84 aa13.73□□□□□ -0.21
SCAF1-201ENST00000360565 BRS3P32247 399 aa13.73□□□□□ -0.21
SCAF1-201ENST00000360565 KHDC1LQ5JSQ8 128 aa13.73□□□□□ -0.21
SCAF1-201ENST00000360565 NHLRC2Q8NBF2 726 aa13.73□□□□□ -0.21
SCAF1-201ENST00000360565 TUBA4BQ9H853 241 aa13.73□□□□□ -0.21
SCAF1-201ENST00000360565 ZNF430Q9H8G1 570 aaPredicted RBP13.73□□□□□ -0.21
SCAF1-201ENST00000360565 PGPA6NDG6 321 aa13.73□□□□□ -0.21
SCAF1-201ENST00000360565 REG1AP05451 166 aa13.73□□□□□ -0.21
SCAF1-201ENST00000360565 WDR82Q6UXN9 313 aa13.73□□□□□ -0.21
SCAF1-201ENST00000360565 ZNF596Q8TC21 504 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms