RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 HOXA5P20719 270 aa11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 C10orf111Q8N326 155 aa11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 TMEM30AQ9NV96 361 aa11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 FREM1Q5H8C1 2179 aa11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 IGHV1OR21-1A0A087WYE8 117 aa11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 CDIPTO14735 213 aa11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 GUSBP11Q6P575 273 aa11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 SDHCQ99643 169 aaPredicted RBP11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 SPEM2Q0P670 501 aa11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 LHX8Q68G74 356 aa11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 Q6AWC8 147 aa11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 ZNF71Q9NQZ8 489 aaPredicted RBP11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 RRHO14718 337 aa11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 GPR183P32249 361 aa11.41□□□□□ -0.58
SRGAP3-201ENST00000360413 OR2H1Q9GZK4 316 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 PGPA6NDG6 321 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 MGST3O14880 152 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 A6NNC1 897 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 IGHV4-39P01824 125 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 TMEM222Q9H0R3 208 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 ST6GALNAC2Q9UJ37 374 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 ZNF257Q9Y2Q1 563 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 IGKV3D-15A0A087WSY6 115 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 FAM90A10PA6NDY2 464 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 FAM90A18PA6NE21 464 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 FAM90A16PA6NEW6 464 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 FAM90A20PA6NIJ5 464 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 FAM90A8PA6NJQ4 464 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 FAM90A7PA6NKC0 464 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 FAM90A22PA8MWA6 464 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 FAM90A12PA8MX19 464 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 FAM90A5PA8MXJ8 464 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 FAM90A23PA8MXZ1 464 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 IGKV3-15P01624 115 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 FAM90A15PP0C7V4 464 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 FAM90A13PP0C7W8 464 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 FAM90A14PP0C7W9 464 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 FAM90A24PP0C7X0 464 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 CRYBB3P26998 211 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 PRSS53Q2L4Q9 553 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 C1orf185Q5T7R7 199 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 SPINK14Q6IE38 97 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 VGLL1Q99990 258 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 CARHSP1Q9Y2V2 147 aaKnown RBP11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 LOC285556D6RIA3 1793 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 FTH1P19P0C7X4 201 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 CT55Q8WUE5 264 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 SFXN3Q9BWM7 321 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 CREBBPQ92793 2442 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 PGPEP1LA6NFU8 196 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 LIPT2A6NK58 231 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 CA7P43166 264 aa11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 EAF1Q96JC9 268 aaPredicted RBP11.4□□□□□ -0.58
SRGAP3-201ENST00000360413 EFNB1P98172 346 aa11.4□□□□□ -0.59
SRGAP3-201ENST00000360413 COL10A1Q03692 680 aa11.4□□□□□ -0.59
SRGAP3-201ENST00000360413 MIC13Q5XKP0 118 aa11.4□□□□□ -0.59
SRGAP3-201ENST00000360413 OR5AN1Q8NGI8 311 aa11.4□□□□□ -0.59
SRGAP3-201ENST00000360413 PLAUP00749 431 aa11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 NPPCP23582 126 aa11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 OR51G1Q8NGK1 321 aa11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 G6PC2Q9NQR9 355 aa11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 RALGAPA2Q2PPJ7 1873 aa11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 EML6Q6ZMW3 1958 aa11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 RPL34P49207 117 aaKnown RBP11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 CCL19Q99731 98 aa11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 IGLV3-25P01717 112 aa11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 CRPP02741 224 aa11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 VSTM2LQ96N03 204 aa11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 NHSQ6T4R5 1651 aa11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 TRBV7-9A0A0J9YWB2 115 aa11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 CLDND2Q8NHS1 167 aa11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 CXCL10P02778 98 aa11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 LINC00614P0C842 121 aa11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 LCN2P80188 198 aa11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 FAM19A2Q8N3H0 131 aa11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 WDYHV1Q96HA8 205 aa11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 SCN7AQ01118 1682 aa11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 RPS11P62280 158 aaKnown RBP eCLIP11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 CENPWQ5EE01 88 aa11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 PDLIM4P50479 330 aa11.39□□□□□ -0.59
SRGAP3-201ENST00000360413 MYOD1P15172 320 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 ZNF146Q15072 292 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 OR4D11Q8NGI4 311 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 IGKV3D-11A0A0A0MRZ8 115 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 NKX2-8O15522 239 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 KLF4O43474 513 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 IGKV3-11P04433 115 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 FGF11Q92914 225 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 RASL10BQ96S79 203 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 LOC390937A0A1W2PQ73 354 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 A8MXK9 166 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 GAGE2BQ13066 116 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 GAGE2EQ4V326 116 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 GAGE2DQ9UEU5 116 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 TRPM7Q96QT4 1865 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 TRBV20OR9-2A0A075B6H5 130 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 TRAV12-3A0A0B4J271 114 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 PLXNB1O43157 2135 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 P2RY4P51582 365 aa11.38□□□□□ -0.59
SRGAP3-201ENST00000360413 TMEM249Q2WGJ8 235 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms