RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 GCM1Q9NP62 436 aa11.48□□□□□ -0.57
CSNK1E-201ENST00000359867 LIN7CQ9NUP9 197 aaKnown RBP11.48□□□□□ -0.57
CSNK1E-201ENST00000359867 KCNS2Q9ULS6 477 aa11.48□□□□□ -0.57
CSNK1E-201ENST00000359867 SMCO3A2RU48 225 aa11.48□□□□□ -0.57
CSNK1E-201ENST00000359867 ZNF705GA8MUZ8 300 aaPredicted RBP11.48□□□□□ -0.57
CSNK1E-201ENST00000359867 SPINT2O43291 252 aa11.48□□□□□ -0.57
CSNK1E-201ENST00000359867 CD55P08174 381 aa11.48□□□□□ -0.57
CSNK1E-201ENST00000359867 UBE2KP61086 200 aa11.48□□□□□ -0.57
CSNK1E-201ENST00000359867 GAGE1Q13065 139 aa11.48□□□□□ -0.57
CSNK1E-201ENST00000359867 DRAM1Q8N682 238 aa11.48□□□□□ -0.57
CSNK1E-201ENST00000359867 CYB561D1Q8N8Q1 229 aa11.48□□□□□ -0.57
CSNK1E-201ENST00000359867 OR13A1Q8NGR1 328 aa11.48□□□□□ -0.57
CSNK1E-201ENST00000359867 OR51H1Q8NH63 302 aa11.48□□□□□ -0.57
CSNK1E-201ENST00000359867 UBALD1Q8TB05 177 aa11.48□□□□□ -0.57
CSNK1E-201ENST00000359867 Q8WTZ3 238 aa11.48□□□□□ -0.57
CSNK1E-201ENST00000359867 TGIF2-C20orf24A0A0A6YYL0 155 aa11.47□□□□□ -0.57
CSNK1E-201ENST00000359867 H3BP45 60 aa11.47□□□□□ -0.57
CSNK1E-201ENST00000359867 M0R143 59 aa11.47□□□□□ -0.57
CSNK1E-201ENST00000359867 TMEM50AO95807 157 aa11.47□□□□□ -0.57
CSNK1E-201ENST00000359867 VAMP2P63027 116 aa11.47□□□□□ -0.57
CSNK1E-201ENST00000359867 ODF3L1Q8IXM7 274 aa11.47□□□□□ -0.57
CSNK1E-201ENST00000359867 TMEM252Q8N6L7 170 aa11.47□□□□□ -0.57
CSNK1E-201ENST00000359867 OR52L2PQ8NGH6 319 aa11.47□□□□□ -0.57
CSNK1E-201ENST00000359867 LSM10Q969L4 123 aaKnown RBP11.47□□□□□ -0.57
CSNK1E-201ENST00000359867 SLC25A31Q9H0C2 315 aa11.47□□□□□ -0.57
CSNK1E-201ENST00000359867 DYNLRB1Q9NP97 96 aa11.47□□□□□ -0.57
CSNK1E-201ENST00000359867 PPP1R3CQ9UQK1 317 aa11.47□□□□□ -0.57
CSNK1E-201ENST00000359867 A0A1B0GU03 582 aa11.47□□□□□ -0.57
CSNK1E-201ENST00000359867 C15orf65H3BRN8 121 aa11.47□□□□□ -0.57
CSNK1E-201ENST00000359867 TRGC1P0CF51 173 aa11.47□□□□□ -0.57
CSNK1E-201ENST00000359867 MMP9P14780 707 aa11.47□□□□□ -0.57
CSNK1E-201ENST00000359867 CCL8P80075 99 aa11.47□□□□□ -0.57
CSNK1E-201ENST00000359867 JOSD1Q15040 202 aaPredicted RBP11.47□□□□□ -0.57
CSNK1E-201ENST00000359867 C16orf54Q6UWD8 224 aa11.47□□□□□ -0.57
CSNK1E-201ENST00000359867 ABHD5Q8WTS1 349 aa11.47□□□□□ -0.57
CSNK1E-201ENST00000359867 C11orf1Q9H5F2 150 aa11.47□□□□□ -0.57
CSNK1E-201ENST00000359867 IGHV3OR15-7A0A075B7D8 119 aa11.46□□□□□ -0.57
CSNK1E-201ENST00000359867 ODAMA1E959 279 aa11.46□□□□□ -0.57
CSNK1E-201ENST00000359867 SRP19P09132 144 aaKnown RBP11.46□□□□□ -0.57
CSNK1E-201ENST00000359867 COX6B1P14854 86 aa11.46□□□□□ -0.57
CSNK1E-201ENST00000359867 TNFRSF1AP19438 455 aa11.46□□□□□ -0.57
CSNK1E-201ENST00000359867 ERVFRD-1P60508 538 aa11.46□□□□□ -0.57
CSNK1E-201ENST00000359867 DLK1P80370 383 aa11.46□□□□□ -0.57
CSNK1E-201ENST00000359867 ID3Q02535 119 aa11.46□□□□□ -0.57
CSNK1E-201ENST00000359867 LFNGQ8NES3 379 aa11.46□□□□□ -0.57
CSNK1E-201ENST00000359867 SDSLQ96GA7 329 aa11.46□□□□□ -0.57
CSNK1E-201ENST00000359867 FBN2P35556 2912 aa11.46□□□□□ -0.57
CSNK1E-201ENST00000359867 ELOA3CA0A087WX78 387 aaPredicted RBP11.46□□□□□ -0.58
CSNK1E-201ENST00000359867 C17orf100A8MU93 164 aa11.46□□□□□ -0.58
CSNK1E-201ENST00000359867 B9A039 149 aa11.46□□□□□ -0.58
CSNK1E-201ENST00000359867 TCF21O43680 179 aa11.46□□□□□ -0.58
CSNK1E-201ENST00000359867 ICAM4Q14773 271 aa11.46□□□□□ -0.58
CSNK1E-201ENST00000359867 EFNB3Q15768 340 aa11.46□□□□□ -0.58
CSNK1E-201ENST00000359867 IZUMO4Q1ZYL8 232 aa11.46□□□□□ -0.58
CSNK1E-201ENST00000359867 ZNF429Q86V71 674 aa11.46□□□□□ -0.58
CSNK1E-201ENST00000359867 FRZBQ92765 325 aa11.46□□□□□ -0.58
CSNK1E-201ENST00000359867 RAB9BQ9NP90 201 aa11.46□□□□□ -0.58
CSNK1E-201ENST00000359867 LAMP3Q9UQV4 416 aa11.46□□□□□ -0.58
CSNK1E-201ENST00000359867 USF3Q68DE3 2245 aa11.46□□□□□ -0.58
CSNK1E-201ENST00000359867 SPG11Q96JI7 2443 aa11.45□□□□□ -0.58
CSNK1E-201ENST00000359867 PITX3O75364 302 aa11.45□□□□□ -0.58
CSNK1E-201ENST00000359867 IRF2P14316 349 aa11.45□□□□□ -0.58
CSNK1E-201ENST00000359867 EDDM3AQ14507 147 aa11.45□□□□□ -0.58
CSNK1E-201ENST00000359867 ZNF266Q14584 549 aa11.45□□□□□ -0.58
CSNK1E-201ENST00000359867 ELOBQ15370 118 aa11.45□□□□□ -0.58
CSNK1E-201ENST00000359867 HIST2H2BCQ6DN03 193 aa11.45□□□□□ -0.58
CSNK1E-201ENST00000359867 TCTEX1D1Q8N7M0 179 aa11.45□□□□□ -0.58
CSNK1E-201ENST00000359867 TPRX1Q8N7U7 411 aa11.45□□□□□ -0.58
CSNK1E-201ENST00000359867 OR6C3Q9NZP0 311 aa11.45□□□□□ -0.58
CSNK1E-201ENST00000359867 SSTR5P35346 364 aa11.45□□□□□ -0.58
CSNK1E-201ENST00000359867 EIF4EBP1Q13541 118 aaPredicted RBP11.45□□□□□ -0.58
CSNK1E-201ENST00000359867 STUMQ69YW2 141 aa11.45□□□□□ -0.58
CSNK1E-201ENST00000359867 TGIF2LYQ8IUE0 185 aa11.45□□□□□ -0.58
CSNK1E-201ENST00000359867 PARD6GQ9BYG4 376 aaPredicted RBP11.45□□□□□ -0.58
CSNK1E-201ENST00000359867 OR2D2Q9H210 308 aa11.45□□□□□ -0.58
CSNK1E-201ENST00000359867 GAB2Q9UQC2 676 aa11.45□□□□□ -0.58
CSNK1E-201ENST00000359867 DSCAMO60469 2012 aa11.45□□□□□ -0.58
CSNK1E-201ENST00000359867 CSMD2Q7Z408 3487 aa11.45□□□□□ -0.58
CSNK1E-201ENST00000359867 NBPF19A0A087WUL8 3843 aa11.45□□□□□ -0.58
CSNK1E-201ENST00000359867 CYB5BO43169 146 aa11.44□□□□□ -0.58
CSNK1E-201ENST00000359867 SCAF4O95104 1147 aaKnown RBP11.44□□□□□ -0.58
CSNK1E-201ENST00000359867 ZNF585BQ52M93 769 aa11.44□□□□□ -0.58
CSNK1E-201ENST00000359867 TEX36Q5VZQ5 186 aa11.44□□□□□ -0.58
CSNK1E-201ENST00000359867 NCR3LG1Q68D85 454 aa11.44□□□□□ -0.58
CSNK1E-201ENST00000359867 GPR146Q96CH1 333 aa11.44□□□□□ -0.58
CSNK1E-201ENST00000359867 FAM234AQ9H0X4 552 aa11.44□□□□□ -0.58
CSNK1E-201ENST00000359867 LYRM2Q9NU23 88 aaPredicted RBP11.44□□□□□ -0.58
CSNK1E-201ENST00000359867 JPT1Q9UK76 154 aa11.44□□□□□ -0.58
CSNK1E-201ENST00000359867 WSB1Q9Y6I7 421 aa11.44□□□□□ -0.58
CSNK1E-201ENST00000359867 CHST1O43916 411 aa11.44□□□□□ -0.58
CSNK1E-201ENST00000359867 IGKV1-39P01597 117 aa11.44□□□□□ -0.58
CSNK1E-201ENST00000359867 IGKV1D-39P04432 117 aa11.44□□□□□ -0.58
CSNK1E-201ENST00000359867 TMEM267Q0VDI3 215 aaPredicted RBP11.44□□□□□ -0.58
CSNK1E-201ENST00000359867 CATR1Q13166 79 aa11.44□□□□□ -0.58
CSNK1E-201ENST00000359867 ZNRF1Q8ND25 227 aa11.44□□□□□ -0.58
CSNK1E-201ENST00000359867 PTPN13Q12923 2485 aa11.44□□□□□ -0.58
CSNK1E-201ENST00000359867 RAI1Q7Z5J4 1906 aaPredicted RBP11.44□□□□□ -0.58
CSNK1E-201ENST00000359867 LRRC30A6NM36 301 aa11.43□□□□□ -0.58
CSNK1E-201ENST00000359867 YPEL1O60688 119 aa11.43□□□□□ -0.58
CSNK1E-201ENST00000359867 RPL23AP62750 156 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms