RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 DOPEY1Q5JWR5 2465 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 IFITM10A6NMD0 228 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 TMPRSS2O15393 492 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 PLXNB1O43157 2135 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 ADAM20O43506 726 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 RAMP3O60896 148 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 FCN3O75636 299 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 LHBP01229 141 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 MBPP02686 304 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-202ENST00000359366 PRB1P04280 392 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 CHRNB4P30926 498 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 DLX1P56177 255 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 ATP5IP56385 69 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-202ENST00000359366 IQCJQ1A5X6 159 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 Q6ZS49 121 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 HIST3H2BBQ8N257 126 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 NUP37Q8NFH4 326 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 FAM222BQ8WU58 562 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 ERGIC1Q969X5 290 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 C18orf12Q96KH6 178 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 C2orf50Q96LR7 162 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 ZNF471Q9BX82 626 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-202ENST00000359366 DYNLRB1Q9NP97 96 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 KCNIP1Q9NZI2 227 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 DOK5Q9P104 306 aa4.22□□□□□ -1.73
ATXN3-202ENST00000359366 NBPF19A0A087WUL8 3843 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 TRBV6-6A0A0A6YYG2 114 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 A0A1W2PPH5 198 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 ODAMA1E959 279 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 CLEC18AA5D8T8 446 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 C17orf100A8MU93 164 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 F6UZH7 168 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 SOX15O60248 233 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 FBXO24O75426 580 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 MMP23AO75900 390 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 YIF1AO95070 293 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 TSPAN15O95858 294 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 IRF2P14316 349 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 TUBG1P23258 451 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 LMO1P25800 156 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 MDH2P40926 338 aaKnown RBP4.21□□□□□ -1.73
ATXN3-202ENST00000359366 SRSF4Q08170 494 aaKnown RBP4.21□□□□□ -1.73
ATXN3-202ENST00000359366 MST1LQ2TV78 715 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 CXorf66Q5JRM2 361 aaPredicted RBP4.21□□□□□ -1.73
ATXN3-202ENST00000359366 LYPD2Q6UXB3 125 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 ZNF695Q8IW36 515 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 COMMD1Q8N668 190 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 DRAM1Q8N682 238 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 INO80EQ8NBZ0 244 aaPredicted RBP4.21□□□□□ -1.73
ATXN3-202ENST00000359366 CLEC18CQ8NCF0 446 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 GALMQ96C23 342 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 RPUSD4Q96CM3 377 aaKnown RBP4.21□□□□□ -1.73
ATXN3-202ENST00000359366 SAT2Q96F10 170 aaPredicted RBP4.21□□□□□ -1.73
ATXN3-202ENST00000359366 GALNT14Q96FL9 552 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 CABLES2Q9BTV7 478 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 NMES1Q9C002 83 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 TMEM222Q9H0R3 208 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 SAP30LQ9HAJ7 183 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 TUBG2Q9NRH3 451 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 MBNL3Q9NUK0 354 aaKnown RBP4.21□□□□□ -1.73
ATXN3-202ENST00000359366 CISD1Q9NZ45 108 aaKnown RBP4.21□□□□□ -1.73
ATXN3-202ENST00000359366 RNF7Q9UBF6 113 aa4.21□□□□□ -1.73
ATXN3-202ENST00000359366 SCO2A0A1W2PP80 73 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 KANTRA0A1W2PQU2 76 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 RNF212BA8MTL3 300 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 FGF16O43320 207 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 OR2F2O95006 317 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 TOMM40O96008 361 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 IGKV1-39P01597 117 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 IGKV1D-39P04432 117 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 CD3EP07766 207 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 NFYBP25208 207 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 ECI1P42126 302 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 ZNF134P52741 427 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 ELLP55199 621 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-202ENST00000359366 UCP3P55916 312 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 RPL30P62888 115 aaKnown RBP4.21□□□□□ -1.74
ATXN3-202ENST00000359366 ZNF816Q0VGE8 651 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-202ENST00000359366 IL15RAQ13261 267 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 OR2F1Q13607 317 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 C3orf36Q3SXR2 165 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 C1orf194Q5T5A4 169 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 SLC35E4Q6ICL7 350 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 Q6ZRM9 215 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 MRPL41Q8IXM3 137 aaKnown RBP4.21□□□□□ -1.74
ATXN3-202ENST00000359366 CMTM1Q8IZ96 169 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 C1orf87Q8N0U7 546 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 CCDC71LQ8N9Z2 235 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 OR10W1Q8NGF6 305 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 RNF141Q8WVD5 230 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 GAFA1Q96PS6 74 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 CLCC1Q96S66 551 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 PGPEP1Q9NXJ5 209 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 GNG12Q9UBI6 72 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 RFNGQ9Y644 331 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 ZANQ9Y493 2812 aa4.21□□□□□ -1.74
ATXN3-202ENST00000359366 USP9YO00507 2555 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-202ENST00000359366 KIR2DL5BA0A0G2JN68 375 aa4.2□□□□□ -1.74
ATXN3-202ENST00000359366 KIR2DL5BA0A0G2JPC4 375 aa4.2□□□□□ -1.74
ATXN3-202ENST00000359366 A0A1W2PPR1 153 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms