RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 RBMY1DP0C7P1 496 aaKnown RBP9.57□□□□□ -0.88
COL11A1-202ENST00000358392 RBMY1A1P0DJD3 496 aaKnown RBP9.57□□□□□ -0.88
COL11A1-202ENST00000358392 RBMY1CP0DJD4 496 aa9.57□□□□□ -0.88
COL11A1-202ENST00000358392 PRB3Q04118 309 aaPredicted RBP9.57□□□□□ -0.88
COL11A1-202ENST00000358392 LHX8Q68G74 356 aa9.57□□□□□ -0.88
COL11A1-202ENST00000358392 TMEM50AO95807 157 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 TSPOP30536 169 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 PNKDQ8N490 385 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 MARS2Q96GW9 593 aaKnown RBP9.56□□□□□ -0.88
COL11A1-202ENST00000358392 GPR132Q9UNW8 380 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 C21orf140B9A014 251 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 TFF3Q07654 80 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 ASXL3Q9C0F0 2248 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 LEPP41159 167 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 FAM71F2Q6NXP2 309 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 TTC9CQ8N5M4 171 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 OR11H4Q8NGC9 324 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 DEFB104AQ8WTQ1 72 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 SRSF4Q08170 494 aaKnown RBP9.56□□□□□ -0.88
COL11A1-202ENST00000358392 PCSK4Q6UW60 755 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 AQP3Q92482 292 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 LOC105371242A0A075B767 164 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 LOC390937A0A1W2PQ73 354 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 CKAP5Q14008 2032 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 P2RY6Q15077 328 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 A0A0U1RRA0 63 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 LOC101059948A0A1B0GTJ6 334 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 GCM2O75603 506 aaPredicted RBP9.56□□□□□ -0.88
COL11A1-202ENST00000358392 CRYBA2P53672 197 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 TMPRSS3P57727 454 aa9.56□□□□□ -0.88
COL11A1-202ENST00000358392 TRBV9A0A0B4J1U6 114 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 SDHCQ99643 169 aaPredicted RBP9.55□□□□□ -0.88
COL11A1-202ENST00000358392 CCL19Q99731 98 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 FOXA2Q9Y261 457 aaPredicted RBP9.55□□□□□ -0.88
COL11A1-202ENST00000358392 SELENOKQ9Y6D0 94 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 SPTBP11277 2137 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 ODAMA1E959 279 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 PTP4A3O75365 173 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 TRAV30A0A087WSZ9 112 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 DANCRP0C864 163 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 HSPE1P61604 102 aaKnown RBP9.55□□□□□ -0.88
COL11A1-202ENST00000358392 CFAP161Q6P656 301 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 CYP2G1PQ6ZSU1 146 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 BHLHA9Q7RTU4 235 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 PPP1R3EQ9H7J1 279 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 C7orf66A4D0T2 115 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 TRGV3P03979 118 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 ASIPP42127 132 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 TCF23Q7RTU1 214 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 SCN7AQ01118 1682 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 RAB9AP51151 201 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 STARD6P59095 220 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 FAM89BQ8N5H3 189 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 WFDC12Q8WWY7 111 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 GSN-AS1Q9NRJ2 163 aa9.55□□□□□ -0.88
COL11A1-202ENST00000358392 LIPFP07098 398 aa9.54□□□□□ -0.88
COL11A1-202ENST00000358392 SHISA5Q8N114 240 aa9.54□□□□□ -0.88
COL11A1-202ENST00000358392 IGHV1-45A0A0A0MS14 117 aa9.54□□□□□ -0.88
COL11A1-202ENST00000358392 TRAV2A0A0B4J234 112 aa9.54□□□□□ -0.88
COL11A1-202ENST00000358392 TRAV8-4A0A0B4J246 113 aa9.54□□□□□ -0.88
COL11A1-202ENST00000358392 IL6RP08887 468 aaPredicted RBP9.54□□□□□ -0.88
COL11A1-202ENST00000358392 FAM27BQ5VT28 67 aa9.54□□□□□ -0.88
COL11A1-202ENST00000358392 LINC01587Q99440 93 aa9.54□□□□□ -0.88
COL11A1-202ENST00000358392 NPIPB4C9JG80 1138 aa9.54□□□□□ -0.88
COL11A1-202ENST00000358392 TCF19Q9Y242 345 aa9.54□□□□□ -0.88
COL11A1-202ENST00000358392 C19orf67A6NJJ6 358 aa9.54□□□□□ -0.88
COL11A1-202ENST00000358392 TMEM250H0YL14 139 aa9.54□□□□□ -0.88
COL11A1-202ENST00000358392 EVI2AP22794 236 aa9.54□□□□□ -0.88
COL11A1-202ENST00000358392 TSPAN7P41732 249 aa9.54□□□□□ -0.88
COL11A1-202ENST00000358392 JMJD8Q96S16 334 aa9.54□□□□□ -0.88
COL11A1-202ENST00000358392 NHP2Q9NX24 153 aaKnown RBP9.54□□□□□ -0.88
COL11A1-202ENST00000358392 TRIP12Q14669 1992 aaPredicted RBP9.54□□□□□ -0.88
COL11A1-202ENST00000358392 NPIPB11E5RHQ5 1161 aa9.54□□□□□ -0.88
COL11A1-202ENST00000358392 TEX45Q8NA69 505 aa9.54□□□□□ -0.88
COL11A1-202ENST00000358392 PHLDA1Q8WV24 401 aaPredicted RBP9.54□□□□□ -0.88
COL11A1-202ENST00000358392 NEUROG1Q92886 237 aa9.54□□□□□ -0.88
COL11A1-202ENST00000358392 DOCK1Q14185 1865 aa9.54□□□□□ -0.88
COL11A1-202ENST00000358392 H3BRM9 83 aa9.54□□□□□ -0.88
COL11A1-202ENST00000358392 TMEM187Q14656 261 aa9.54□□□□□ -0.88
COL11A1-202ENST00000358392 MCM3APO60318 1980 aa9.53□□□□□ -0.88
COL11A1-202ENST00000358392 RREB1Q92766 1687 aa9.53□□□□□ -0.88
COL11A1-202ENST00000358392 IGFBP2P18065 325 aa9.53□□□□□ -0.88
COL11A1-202ENST00000358392 CLDND2Q8NHS1 167 aa9.53□□□□□ -0.88
COL11A1-202ENST00000358392 NKX2-8O15522 239 aa9.53□□□□□ -0.88
COL11A1-202ENST00000358392 TBR1Q16650 682 aa9.53□□□□□ -0.88
COL11A1-202ENST00000358392 SSBP4Q9BWG4 385 aaPredicted RBP9.53□□□□□ -0.88
COL11A1-202ENST00000358392 ALX4Q9H161 411 aaPredicted RBP9.53□□□□□ -0.88
COL11A1-202ENST00000358392 TMEM74BQ9NUR3 256 aa9.53□□□□□ -0.88
COL11A1-202ENST00000358392 FOXS1O43638 330 aa9.53□□□□□ -0.88
COL11A1-202ENST00000358392 ATP5G3P48201 142 aa9.53□□□□□ -0.88
COL11A1-202ENST00000358392 WFDC6Q9BQY6 131 aa9.53□□□□□ -0.88
COL11A1-202ENST00000358392 IL36BQ9NZH7 164 aa9.53□□□□□ -0.88
COL11A1-202ENST00000358392 SEMA5BQ9P283 1151 aa9.53□□□□□ -0.88
COL11A1-202ENST00000358392 C8orf82Q6P1X6 216 aaPredicted RBP9.53□□□□□ -0.88
COL11A1-202ENST00000358392 FAM214BQ7L5A3 538 aa9.53□□□□□ -0.88
COL11A1-202ENST00000358392 ZNRF1Q8ND25 227 aa9.53□□□□□ -0.88
COL11A1-202ENST00000358392 PGPEP1LA6NFU8 196 aa9.53□□□□□ -0.88
COL11A1-202ENST00000358392 SLC25A20O43772 301 aa9.53□□□□□ -0.88
COL11A1-202ENST00000358392 GPR183P32249 361 aa9.53□□□□□ -0.88
COL11A1-202ENST00000358392 ZNF146Q15072 292 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms