RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 K7EP34 96 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 SIVA1O15304 175 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 IFNA1P01562 189 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 LINC00869P0C866 280 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 ARF1P84077 181 aaKnown RBP7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 PMP22Q01453 160 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 FAM57BQ71RH2 274 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 LHX4Q969G2 390 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 DEFB126Q9BYW3 111 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 CPAMD8Q8IZJ3 1885 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 A0A087X0K7 114 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 LOC102725191A0A1B0GVB3 256 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 A0A1B0GW15 77 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 ZNF878C9JN71 531 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 FCN1O00602 326 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 HLA-DQA2P01906 255 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 REG1AP05451 166 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 CLEC3BP05452 202 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 SRD5A2P31213 254 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 GUCA1AP43080 201 aaPredicted RBP7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 OR3A4PP47883 348 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 PAX9P55771 341 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 RPL24P83731 157 aaKnown RBP7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 ROM1Q03395 351 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 SRSF1Q07955 248 aaKnown RBP eCLIP7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 LTC4SQ16873 150 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 DCAF12Q5T6F0 453 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 EBLN2Q6P2I7 272 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 LHFPL2Q6ZUX7 228 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 GTF2H5Q6ZYL4 71 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 OR5D14Q8NGL3 314 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 HDHD3Q9BSH5 251 aaPredicted RBP7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 NXT1Q9UKK6 140 aaKnown RBP7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 POLEQ07864 2286 aa7.83□□□□□ -1.16
SMARCAL1-202ENST00000358207 IGKV1D-42A0A075B6H8 117 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 SIRPB1O00241 398 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 F2RL2O00254 374 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 TNFRSF13BO14836 293 aaPredicted RBP7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 CCL2P13500 99 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 SSTR5P35346 364 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 IER3P46695 156 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 DMRTC1Q5HYR2 192 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 TSKUQ8WUA8 353 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 MCTS1Q9ULC4 181 aaKnown RBP7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 TNFRSF18Q9Y5U5 241 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 KLF7O75840 302 aaPredicted RBP7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 NTF3P20783 257 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 IL11P20809 199 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 VDAC1P21796 283 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 NPY1RP25929 384 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 ALG10Q5BKT4 473 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 C12orf54Q6X4T0 127 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 RPP25LQ8N5L8 163 aaKnown RBP7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 SSC4DQ8WTU2 575 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 TMEM59Q9BXS4 323 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 JPT1Q9UK76 154 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 OR11H12B2RN74 326 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 H3BP45 60 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 PHF1O43189 567 aaPredicted RBP7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 CELA3AP09093 270 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 STAG3L2P0CL84 134 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 LIFP15018 202 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 ID1P41134 155 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 RHOBP62745 196 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 TGFBR3Q03167 851 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 GABRA6Q16445 453 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 C9orf135Q5VTT2 229 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 LINC00346Q8IVM7 164 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 BOD1L2Q8IYS8 172 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 KIR3DL3Q8N743 410 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 STPG3Q8N7X2 389 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 OR11H1Q8NG94 326 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 OR11H2Q8NH07 326 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 TMEM45BQ96B21 275 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 LINC00470Q9BZP3 86 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 WDR61Q9GZS3 305 aaKnown RBP7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 METTL7AQ9H8H3 244 aa7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 PNRC2Q9NPJ4 139 aaKnown RBP7.82□□□□□ -1.16
SMARCAL1-202ENST00000358207 ICE1Q9Y2F5 2266 aa7.81□□□□□ -1.16
SMARCAL1-202ENST00000358207 FREM1Q5H8C1 2179 aa7.81□□□□□ -1.16
SMARCAL1-202ENST00000358207 SNURFLB1AK76 121 aa7.81□□□□□ -1.16
SMARCAL1-202ENST00000358207 CHST1O43916 411 aa7.81□□□□□ -1.16
SMARCAL1-202ENST00000358207 ISG15P05161 165 aa7.81□□□□□ -1.16
SMARCAL1-202ENST00000358207 WT1P19544 449 aaPredicted RBP7.81□□□□□ -1.16
SMARCAL1-202ENST00000358207 FXYD4P59646 89 aa7.81□□□□□ -1.16
SMARCAL1-202ENST00000358207 ACKR1Q16570 336 aa7.81□□□□□ -1.16
SMARCAL1-202ENST00000358207 C19orf35Q6ZS72 473 aa7.81□□□□□ -1.16
SMARCAL1-202ENST00000358207 OR10G8Q8NGN5 311 aa7.81□□□□□ -1.16
SMARCAL1-202ENST00000358207 NEU4Q8WWR8 484 aaPredicted RBP7.81□□□□□ -1.16
SMARCAL1-202ENST00000358207 CRIM1Q9NZV1 1036 aa7.81□□□□□ -1.16
SMARCAL1-202ENST00000358207 R4GMQ9 66 aa7.81□□□□□ -1.16
SMARCAL1-202ENST00000358207 FRG2CA6NGY1 282 aa7.81□□□□□ -1.16
SMARCAL1-202ENST00000358207 FOXI3A8MTJ6 420 aaPredicted RBP7.81□□□□□ -1.16
SMARCAL1-202ENST00000358207 PDE6DO43924 150 aa7.81□□□□□ -1.16
SMARCAL1-202ENST00000358207 CNIH1O95406 144 aa7.81□□□□□ -1.16
SMARCAL1-202ENST00000358207 SERPINE2P07093 398 aa7.81□□□□□ -1.16
SMARCAL1-202ENST00000358207 SLC25A6P12236 298 aa7.81□□□□□ -1.16
SMARCAL1-202ENST00000358207 NPBWR2P48146 333 aa7.81□□□□□ -1.16
SMARCAL1-202ENST00000358207 PSMB3P49720 205 aa7.81□□□□□ -1.16
SMARCAL1-202ENST00000358207 THBS3P49746 956 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms