RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 CELSR1Q9NYQ6 3014 aa13.75□□□□□ -0.21
TPM1-205ENST00000357980 ITPR2Q14571 2701 aa13.75□□□□□ -0.21
TPM1-205ENST00000357980 TIMM23O14925 209 aa13.74□□□□□ -0.21
TPM1-205ENST00000357980 RBMXL2O75526 392 aaKnown RBP13.74□□□□□ -0.21
TPM1-205ENST00000357980 CFHR4Q92496 578 aa13.74□□□□□ -0.21
TPM1-205ENST00000357980 AJUBAQ96IF1 538 aa13.74□□□□□ -0.21
TPM1-205ENST00000357980 BET1LQ9NYM9 111 aa13.74□□□□□ -0.21
TPM1-205ENST00000357980 FOXA2Q9Y261 457 aaPredicted RBP13.74□□□□□ -0.21
TPM1-205ENST00000357980 TBL2Q9Y4P3 447 aaKnown RBP13.74□□□□□ -0.21
TPM1-205ENST00000357980 KANTRA0A1W2PQU2 76 aa13.74□□□□□ -0.21
TPM1-205ENST00000357980 OOSP1A8MZH6 123 aa13.74□□□□□ -0.21
TPM1-205ENST00000357980 GPR137BO60478 399 aa13.74□□□□□ -0.21
TPM1-205ENST00000357980 MED6O75586 246 aa13.74□□□□□ -0.21
TPM1-205ENST00000357980 RPS16P62249 146 aaKnown RBP13.74□□□□□ -0.21
TPM1-205ENST00000357980 VAMP2P63027 116 aa13.74□□□□□ -0.21
TPM1-205ENST00000357980 DYNAPQ8N1N2 210 aa13.74□□□□□ -0.21
TPM1-205ENST00000357980 OR52E5Q8NH55 327 aa13.74□□□□□ -0.21
TPM1-205ENST00000357980 C17orf50Q8WW18 174 aa13.74□□□□□ -0.21
TPM1-205ENST00000357980 RITA1Q96K30 269 aa13.74□□□□□ -0.21
TPM1-205ENST00000357980 ARPC5LQ9BPX5 153 aa13.74□□□□□ -0.21
TPM1-205ENST00000357980 CENPVL3A0A0U1RRI6 287 aa13.73□□□□□ -0.21
TPM1-205ENST00000357980 IGSF23A1L1A6 192 aa13.73□□□□□ -0.21
TPM1-205ENST00000357980 RNF223E7ERA6 249 aa13.73□□□□□ -0.21
TPM1-205ENST00000357980 UPK2O00526 184 aa13.73□□□□□ -0.21
TPM1-205ENST00000357980 IAPPP10997 89 aa13.73□□□□□ -0.21
TPM1-205ENST00000357980 CAV2P51636 162 aa13.73□□□□□ -0.21
TPM1-205ENST00000357980 LGALS4P56470 323 aa13.73□□□□□ -0.21
TPM1-205ENST00000357980 TAS2R30P59541 319 aa13.73□□□□□ -0.21
TPM1-205ENST00000357980 TEX261Q6UWH6 196 aa13.73□□□□□ -0.21
TPM1-205ENST00000357980 SMIM8Q96KF7 97 aa13.73□□□□□ -0.21
TPM1-205ENST00000357980 REG4Q9BYZ8 158 aa13.73□□□□□ -0.21
TPM1-205ENST00000357980 U3KQ87 197 aa13.73□□□□□ -0.21
TPM1-205ENST00000357980 ZANQ9Y493 2812 aa13.73□□□□□ -0.21
TPM1-205ENST00000357980 TRAV20A0A0B4J274 112 aa13.72□□□□□ -0.21
TPM1-205ENST00000357980 FAM24AA6NFZ4 105 aa13.72□□□□□ -0.21
TPM1-205ENST00000357980 KBTBD11O94819 623 aa13.72□□□□□ -0.21
TPM1-205ENST00000357980 LGALS7P47929 136 aa13.72□□□□□ -0.21
TPM1-205ENST00000357980 SPCS3P61009 180 aa13.72□□□□□ -0.21
TPM1-205ENST00000357980 EWSR1Q01844 656 aaKnown RBP eCLIP13.72□□□□□ -0.21
TPM1-205ENST00000357980 SSX2Q16385 188 aa13.72□□□□□ -0.21
TPM1-205ENST00000357980 SLC51BQ86UW2 128 aa13.72□□□□□ -0.21
TPM1-205ENST00000357980 TMEM252Q8N6L7 170 aa13.72□□□□□ -0.21
TPM1-205ENST00000357980 LINC01356Q8N9X3 169 aa13.72□□□□□ -0.21
TPM1-205ENST00000357980 ZDHHC16Q969W1 377 aa13.72□□□□□ -0.21
TPM1-205ENST00000357980 BSCL2Q96G97 398 aaPredicted RBP13.72□□□□□ -0.21
TPM1-205ENST00000357980 HIF1ANQ9NWT6 349 aa13.72□□□□□ -0.21
TPM1-205ENST00000357980 CACFD1Q9UGQ2 172 aa13.72□□□□□ -0.21
TPM1-205ENST00000357980 VENTXO95231 258 aa13.71□□□□□ -0.21
TPM1-205ENST00000357980 CFDP00746 253 aaPredicted RBP13.71□□□□□ -0.21
TPM1-205ENST00000357980 PAX6P26367 422 aa13.71□□□□□ -0.21
TPM1-205ENST00000357980 CD1BP29016 333 aa13.71□□□□□ -0.21
TPM1-205ENST00000357980 SAA4P35542 130 aa13.71□□□□□ -0.21
TPM1-205ENST00000357980 CCDC144NLQ6NUI1 221 aa13.71□□□□□ -0.21
TPM1-205ENST00000357980 VSTM2AQ8TAG5 236 aa13.71□□□□□ -0.21
TPM1-205ENST00000357980 DTD1Q8TEA8 209 aa13.71□□□□□ -0.21
TPM1-205ENST00000357980 ZC4H2Q9NQZ6 224 aa13.71□□□□□ -0.21
TPM1-205ENST00000357980 CYTL1Q9NRR1 136 aa13.71□□□□□ -0.21
TPM1-205ENST00000357980 PRNDQ9UKY0 176 aa13.71□□□□□ -0.21
TPM1-205ENST00000357980 AUP1Q9Y679 476 aa13.71□□□□□ -0.21
TPM1-205ENST00000357980 PRRC2AP48634 2157 aaKnown RBP13.71□□□□□ -0.22
TPM1-205ENST00000357980 H3BP45 60 aa13.71□□□□□ -0.22
TPM1-205ENST00000357980 NPFFO15130 113 aa13.71□□□□□ -0.22
TPM1-205ENST00000357980 IFNA17P01571 189 aa13.71□□□□□ -0.22
TPM1-205ENST00000357980 GATA3P23771 443 aa13.71□□□□□ -0.22
TPM1-205ENST00000357980 RPL23AP62750 156 aaKnown RBP13.71□□□□□ -0.22
TPM1-205ENST00000357980 NHLH2Q02577 135 aa13.71□□□□□ -0.22
TPM1-205ENST00000357980 CLEC9AQ6UXN8 241 aa13.71□□□□□ -0.22
TPM1-205ENST00000357980 PIP4P2Q8N4L2 257 aa13.71□□□□□ -0.22
TPM1-205ENST00000357980 MAPK1IP1LQ8NDC0 245 aa13.71□□□□□ -0.22
TPM1-205ENST00000357980 OR4A5Q8NH83 315 aa13.71□□□□□ -0.22
TPM1-205ENST00000357980 TMEM167AQ8TBQ9 72 aa13.71□□□□□ -0.22
TPM1-205ENST00000357980 Q96MF0 132 aa13.71□□□□□ -0.22
TPM1-205ENST00000357980 SLC25A31Q9H0C2 315 aa13.71□□□□□ -0.22
TPM1-205ENST00000357980 PSENENQ9NZ42 101 aa13.71□□□□□ -0.22
TPM1-205ENST00000357980 FBXL17Q9UF56 701 aa13.71□□□□□ -0.22
TPM1-205ENST00000357980 SPINK9Q5DT21 86 aa13.7□□□□□ -0.22
TPM1-205ENST00000357980 ZNF680Q8NEM1 530 aa13.7□□□□□ -0.22
TPM1-205ENST00000357980 OR8H1Q8NGG4 311 aa13.7□□□□□ -0.22
TPM1-205ENST00000357980 MALSU1Q96EH3 234 aa13.7□□□□□ -0.22
TPM1-205ENST00000357980 RNF5Q99942 180 aa13.7□□□□□ -0.22
TPM1-205ENST00000357980 TCF19Q9Y242 345 aa13.7□□□□□ -0.22
TPM1-205ENST00000357980 ZNF257Q9Y2Q1 563 aa13.7□□□□□ -0.22
TPM1-205ENST00000357980 HECTD1Q9ULT8 2610 aa13.7□□□□□ -0.22
TPM1-205ENST00000357980 CREBBPQ92793 2442 aa13.69□□□□□ -0.22
TPM1-205ENST00000357980 CEBPZOSA8MTT3 80 aa13.69□□□□□ -0.22
TPM1-205ENST00000357980 TAAR5O14804 337 aa13.69□□□□□ -0.22
TPM1-205ENST00000357980 SLC25A17O43808 307 aa13.69□□□□□ -0.22
TPM1-205ENST00000357980 FGF2P09038 288 aa13.69□□□□□ -0.22
TPM1-205ENST00000357980 CNTFRP26992 372 aa13.69□□□□□ -0.22
TPM1-205ENST00000357980 HSPE1P61604 102 aaKnown RBP13.69□□□□□ -0.22
TPM1-205ENST00000357980 BAXQ07812 192 aa13.69□□□□□ -0.22
TPM1-205ENST00000357980 MRGPRG-AS1Q2M3A8 158 aa13.69□□□□□ -0.22
TPM1-205ENST00000357980 VMA21Q3ZAQ7 101 aa13.69□□□□□ -0.22
TPM1-205ENST00000357980 CIB3Q96Q77 187 aaPredicted RBP13.69□□□□□ -0.22
TPM1-205ENST00000357980 ZNF471Q9BX82 626 aaPredicted RBP13.69□□□□□ -0.22
TPM1-205ENST00000357980 C7orf69Q9H7B7 122 aa13.69□□□□□ -0.22
TPM1-205ENST00000357980 TPSG1Q9NRR2 321 aa13.69□□□□□ -0.22
TPM1-205ENST00000357980 NUP50Q9UKX7 468 aa13.69□□□□□ -0.22
TPM1-205ENST00000357980 OR51B2Q9Y5P1 312 aa13.69□□□□□ -0.22
TPM1-205ENST00000357980 IGHV1-69DA0A0B4J2H0 117 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms