RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 XKRY2A2RUG3 117 aa16.96■□□□□ 0.31
COL13A1-202ENST00000357811 DEFB109BQ30KR1 87 aa16.96■□□□□ 0.31
COL13A1-202ENST00000357811 ZNF114Q8NC26 417 aa16.96■□□□□ 0.31
COL13A1-202ENST00000357811 NEIL1Q96FI4 390 aaPredicted RBP16.96■□□□□ 0.31
COL13A1-202ENST00000357811 HSD17B10Q99714 261 aaKnown RBP16.96■□□□□ 0.31
COL13A1-202ENST00000357811 ATP6V1FQ16864 119 aa16.95■□□□□ 0.3
COL13A1-202ENST00000357811 CIB3Q96Q77 187 aaPredicted RBP16.95■□□□□ 0.3
COL13A1-202ENST00000357811 M0R1B8 84 aa16.95■□□□□ 0.3
COL13A1-202ENST00000357811 C1QTNF9P0C862 333 aa16.95■□□□□ 0.3
COL13A1-202ENST00000357811 FAM78BQ5VT40 261 aa16.95■□□□□ 0.3
COL13A1-202ENST00000357811 CTDSP1Q9GZU7 261 aa16.95■□□□□ 0.3
COL13A1-202ENST00000357811 DSCAMO60469 2012 aa16.95■□□□□ 0.3
COL13A1-202ENST00000357811 AQP7O14520 342 aa16.95■□□□□ 0.3
COL13A1-202ENST00000357811 OR2V2Q96R30 315 aa16.95■□□□□ 0.3
COL13A1-202ENST00000357811 TACC2O95359 2948 aa16.94■□□□□ 0.3
COL13A1-202ENST00000357811 A0A1B0GUS0 222 aa16.94■□□□□ 0.3
COL13A1-202ENST00000357811 MBP02144 154 aa16.94■□□□□ 0.3
COL13A1-202ENST00000357811 CD82P27701 267 aa16.94■□□□□ 0.3
COL13A1-202ENST00000357811 MORN2Q502X0 79 aa16.94■□□□□ 0.3
COL13A1-202ENST00000357811 CENPVQ7Z7K6 275 aaPredicted RBP16.94■□□□□ 0.3
COL13A1-202ENST00000357811 Q8N7P7 452 aa16.94■□□□□ 0.3
COL13A1-202ENST00000357811 FAM122AQ96E09 287 aa16.94■□□□□ 0.3
COL13A1-202ENST00000357811 PARD6GQ9BYG4 376 aaPredicted RBP16.94■□□□□ 0.3
COL13A1-202ENST00000357811 ZNRD1Q9P1U0 126 aa16.94■□□□□ 0.3
COL13A1-202ENST00000357811 GNB1P62873 340 aa16.94■□□□□ 0.3
COL13A1-202ENST00000357811 MS4A5Q9H3V2 200 aa16.94■□□□□ 0.3
COL13A1-202ENST00000357811 SRD5A3Q9H8P0 318 aa16.94■□□□□ 0.3
COL13A1-202ENST00000357811 ABCA1O95477 2261 aa16.94■□□□□ 0.3
COL13A1-202ENST00000357811 TMEM250H0YL14 139 aa16.93■□□□□ 0.3
COL13A1-202ENST00000357811 ACOT6Q3I5F7 207 aaPredicted RBP16.93■□□□□ 0.3
COL13A1-202ENST00000357811 ELOA3CA0A087WX78 387 aaPredicted RBP16.93■□□□□ 0.3
COL13A1-202ENST00000357811 ZNF705GA8MUZ8 300 aaPredicted RBP16.93■□□□□ 0.3
COL13A1-202ENST00000357811 C17orf112F2Z3M2 114 aa16.93■□□□□ 0.3
COL13A1-202ENST00000357811 ARL14EPLP0DKL9 152 aa16.93■□□□□ 0.3
COL13A1-202ENST00000357811 PDLIM3Q53GG5 364 aaPredicted RBP16.93■□□□□ 0.3
COL13A1-202ENST00000357811 GCSAMQ8N6F7 178 aa16.93■□□□□ 0.3
COL13A1-202ENST00000357811 GNG10P50151 68 aa16.92■□□□□ 0.3
COL13A1-202ENST00000357811 GNB2P62879 340 aa16.92■□□□□ 0.3
COL13A1-202ENST00000357811 NEU1Q99519 415 aa16.92■□□□□ 0.3
COL13A1-202ENST00000357811 PITPNC1Q9UKF7 332 aa16.92■□□□□ 0.3
COL13A1-202ENST00000357811 IGHG3P01860 377 aa16.92■□□□□ 0.3
COL13A1-202ENST00000357811 AMBPP02760 352 aa16.92■□□□□ 0.3
COL13A1-202ENST00000357811 ACSF3Q4G176 576 aaPredicted RBP16.92■□□□□ 0.3
COL13A1-202ENST00000357811 STARD4Q96DR4 205 aa16.92■□□□□ 0.3
COL13A1-202ENST00000357811 MANBALQ9NQG1 85 aa16.92■□□□□ 0.3
COL13A1-202ENST00000357811 TNFSF13O75888 250 aa16.92■□□□□ 0.3
COL13A1-202ENST00000357811 HRASP01112 189 aa16.92■□□□□ 0.3
COL13A1-202ENST00000357811 THBS3P49746 956 aa16.92■□□□□ 0.3
COL13A1-202ENST00000357811 TREML4Q6UXN2 200 aa16.92■□□□□ 0.3
COL13A1-202ENST00000357811 SNRNP40Q96DI7 357 aaKnown RBP16.92■□□□□ 0.3
COL13A1-202ENST00000357811 MRPL37Q9BZE1 423 aaKnown RBP16.92■□□□□ 0.3
COL13A1-202ENST00000357811 TMEM140Q9NV12 185 aa16.92■□□□□ 0.3
COL13A1-202ENST00000357811 PROCRQ9UNN8 238 aa16.92■□□□□ 0.3
COL13A1-202ENST00000357811 KITLGP21583 273 aa16.91■□□□□ 0.3
COL13A1-202ENST00000357811 GUSBP1Q15486 140 aa16.91■□□□□ 0.3
COL13A1-202ENST00000357811 SPATA31B1PQ5VZV4 182 aa16.91■□□□□ 0.3
COL13A1-202ENST00000357811 BHLHA15Q7RTS1 189 aaPredicted RBP16.91■□□□□ 0.3
COL13A1-202ENST00000357811 TGIF2LYQ8IUE0 185 aa16.91■□□□□ 0.3
COL13A1-202ENST00000357811 OR2T10Q8NGZ9 312 aa16.91■□□□□ 0.3
COL13A1-202ENST00000357811 PRR7Q8TB68 274 aa16.91■□□□□ 0.3
COL13A1-202ENST00000357811 S1PR3Q99500 378 aa16.91■□□□□ 0.3
COL13A1-202ENST00000357811 C2orf88Q9BSF0 95 aa16.91■□□□□ 0.3
COL13A1-202ENST00000357811 DKK4Q9UBT3 224 aa16.91■□□□□ 0.3
COL13A1-202ENST00000357811 WDR83OSQ9Y284 106 aa16.91■□□□□ 0.3
COL13A1-202ENST00000357811 PTPRBP23467 1997 aa16.91■□□□□ 0.3
COL13A1-202ENST00000357811 TMEM170AQ8WVE7 144 aa16.91■□□□□ 0.3
COL13A1-202ENST00000357811 ZNF71Q9NQZ8 489 aaPredicted RBP16.91■□□□□ 0.3
COL13A1-202ENST00000357811 ERVK-16P61578 105 aa16.9■□□□□ 0.3
COL13A1-202ENST00000357811 OR1P1Q8NH06 330 aa16.9■□□□□ 0.3
COL13A1-202ENST00000357811 SARAFQ96BY9 339 aa16.9■□□□□ 0.3
COL13A1-202ENST00000357811 MGST2Q99735 147 aa16.9■□□□□ 0.3
COL13A1-202ENST00000357811 PRR33A8MZF0 331 aa16.9■□□□□ 0.3
COL13A1-202ENST00000357811 ACTL6BO94805 426 aa16.9■□□□□ 0.3
COL13A1-202ENST00000357811 TCF23Q7RTU1 214 aa16.9■□□□□ 0.3
COL13A1-202ENST00000357811 ITLN1Q8WWA0 313 aa16.9■□□□□ 0.3
COL13A1-202ENST00000357811 PXMP4Q9Y6I8 212 aa16.9■□□□□ 0.3
COL13A1-202ENST00000357811 A0A1B0GWJ7 208 aa16.89■□□□□ 0.3
COL13A1-202ENST00000357811 HPRT1P00492 218 aa16.89■□□□□ 0.3
COL13A1-202ENST00000357811 ADH4P08319 380 aa16.89■□□□□ 0.3
COL13A1-202ENST00000357811 LINC01551Q86U37 167 aa16.89■□□□□ 0.3
COL13A1-202ENST00000357811 TMEM183AQ8IXX5 376 aa16.89■□□□□ 0.3
COL13A1-202ENST00000357811 SCO2A0A1W2PP80 73 aa16.89■□□□□ 0.29
COL13A1-202ENST00000357811 ZNF320A2RRD8 509 aa16.89■□□□□ 0.29
COL13A1-202ENST00000357811 MOB3BQ86TA1 216 aa16.89■□□□□ 0.29
COL13A1-202ENST00000357811 LYG1Q8N1E2 194 aa16.89■□□□□ 0.29
COL13A1-202ENST00000357811 IFI27L2Q9H2X8 130 aa16.89■□□□□ 0.29
COL13A1-202ENST00000357811 RELNP78509 3460 aa16.89■□□□□ 0.29
COL13A1-202ENST00000357811 PLXNB1O43157 2135 aa16.89■□□□□ 0.29
COL13A1-202ENST00000357811 TRBV20OR9-2A0A075B6H5 130 aa16.89■□□□□ 0.29
COL13A1-202ENST00000357811 RBFOX2O43251 390 aaKnown RBP eCLIP16.89■□□□□ 0.29
COL13A1-202ENST00000357811 SEM1Q6ZVN7 128 aa16.89■□□□□ 0.29
COL13A1-202ENST00000357811 SEPSECSQ9HD40 501 aaKnown RBP16.89■□□□□ 0.29
COL13A1-202ENST00000357811 NBASA2RRP1 2371 aa16.88■□□□□ 0.29
COL13A1-202ENST00000357811 TRAV17A0A0B4J275 112 aa16.88■□□□□ 0.29
COL13A1-202ENST00000357811 FOXH1O75593 365 aa16.88■□□□□ 0.29
COL13A1-202ENST00000357811 LOXL3P58215 753 aa16.88■□□□□ 0.29
COL13A1-202ENST00000357811 VWC2Q2TAL6 325 aa16.88■□□□□ 0.29
COL13A1-202ENST00000357811 SRRM5B3KS81 715 aa16.88■□□□□ 0.29
COL13A1-202ENST00000357811 GFRA3O60609 400 aa16.88■□□□□ 0.29
COL13A1-202ENST00000357811 NUBP1P53384 320 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms