RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 HKR1P10072 659 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 PRSS53Q2L4Q9 553 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 ZNF880Q6PDB4 577 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 SLC25A47Q6Q0C1 308 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 ZIC4Q8N9L1 334 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 WBP1Q96G27 269 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 TMEM250H0YL14 139 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 SLC25A20O43772 301 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 C8orf88P0DMB2 117 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 ATP6V0CP27449 155 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 MGAT2Q10469 447 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 NSUN5P1Q3KNT7 163 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 VAX1Q5SQQ9 334 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 STHQ8IWL8 128 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 CLDND2Q8NHS1 167 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 OR5P3Q8WZ94 311 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 HS3ST3B1Q9Y662 390 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 TSPAN2O60636 221 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 IGKV1D-33P01593 117 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 IGKV1-33P01594 117 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 CNTFRP26992 372 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 SSTR5P35346 364 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 ACSF3Q4G176 576 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-202ENST00000356435 OR4D5Q8NGN0 318 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 ZPLD1Q8TCW7 415 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 NUDT11Q96G61 164 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 ZNF703Q9H7S9 590 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-202ENST00000356435 AURKAIP1Q9NWT8 199 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-202ENST00000356435 ARID2Q68CP9 1835 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 TRBV20OR9-2A0A075B6H5 130 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 TRAV8-7A0A075B6U6 113 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 IGKV3-20P01619 116 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 MPZP25189 248 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 CFPP27918 469 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 OR10AG1Q8NH19 301 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 DPM3Q9P2X0 92 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 TUBD1Q9UJT1 453 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 PGLYRP1O75594 196 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-202ENST00000356435 PHLDA1Q8WV24 401 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-202ENST00000356435 MS4A3Q96HJ5 214 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 CBLN4Q9NTU7 201 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 A0A0G2JMZ2 1700 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 LRRC37A2A6NM11 1700 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 C12orf54Q6X4T0 127 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 COLCA1Q6ZS62 124 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 C10orf126Q8N4M7 172 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 TMEM52Q8NDY8 209 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 ABHD17AQ96GS6 310 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 A0A1B0GTI1 187 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 RNF222A6NCQ9 220 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 RNASE4P34096 147 aaKnown RBP4.72□□□□□ -1.65
PTPRD-202ENST00000356435 CMC4P56277 68 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-202ENST00000356435 TMEM136Q6ZRR5 245 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 FAM90A1Q86YD7 464 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 OR5AC2Q9NZP5 309 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 J3QRE1 110 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 IL6RP08887 468 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-202ENST00000356435 ARL14EPLP0DKL9 152 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 IL11P20809 199 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 MEF2BQ02080 365 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-202ENST00000356435 MEF2CQ06413 473 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-202ENST00000356435 MBNL2Q5VZF2 373 aaKnown RBP4.72□□□□□ -1.65
PTPRD-202ENST00000356435 TMEM167AQ8TBQ9 72 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 VN1R17PQ8TDU5 208 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 NRTNQ99748 197 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 NXT2Q9NPJ8 142 aaKnown RBP4.72□□□□□ -1.65
PTPRD-202ENST00000356435 PILRAQ9UKJ1 303 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 ZFC3H1O60293 1989 aaKnown RBP4.72□□□□□ -1.65
PTPRD-202ENST00000356435 TRAV20A0A0B4J274 112 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 EFEMP2O95967 443 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 SRSF12Q8WXF0 261 aaKnown RBP4.72□□□□□ -1.65
PTPRD-202ENST00000356435 NDUFB4O95168 129 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 HLA-DRB1P01911 266 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 KLK15Q9H2R5 256 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 KLHDC2Q9Y2U9 406 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 UBE2CO00762 179 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 IGHMP01871 453 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 HOXA5P20719 270 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 TNFRSF9Q07011 255 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 OR5AN1Q8NGI8 311 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 OSR1Q8TAX0 266 aaPredicted RBP4.72□□□□□ -1.65
PTPRD-202ENST00000356435 DNASE2BQ8WZ79 361 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 TMEM54Q969K7 222 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 LINC00470Q9BZP3 86 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 RPRMQ9NS64 109 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 DLL3Q9NYJ7 618 aa4.72□□□□□ -1.65
PTPRD-202ENST00000356435 TRBV6-7A0A0A0MS04 114 aa4.71□□□□□ -1.65
PTPRD-202ENST00000356435 TRBV9A0A0B4J1U6 114 aa4.71□□□□□ -1.65
PTPRD-202ENST00000356435 C7orf71A4D174 169 aa4.71□□□□□ -1.65
PTPRD-202ENST00000356435 CDK2AP2O75956 126 aa4.71□□□□□ -1.65
PTPRD-202ENST00000356435 TGIF1Q15583 401 aa4.71□□□□□ -1.65
PTPRD-202ENST00000356435 SPATA45Q537H7 98 aa4.71□□□□□ -1.65
PTPRD-202ENST00000356435 GOLT1AQ6ZVE7 132 aa4.71□□□□□ -1.65
PTPRD-202ENST00000356435 TCF19Q9Y242 345 aa4.71□□□□□ -1.65
PTPRD-202ENST00000356435 KNTC1P50748 2209 aa4.71□□□□□ -1.65
PTPRD-202ENST00000356435 A0A1B0GW15 77 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 ZXDCQ2QGD7 858 aaPredicted RBP4.71□□□□□ -1.66
PTPRD-202ENST00000356435 LDLRAD2Q5SZI1 272 aa4.71□□□□□ -1.66
PTPRD-202ENST00000356435 SELENOHQ8IZQ5 122 aaKnown RBP4.71□□□□□ -1.66
PTPRD-202ENST00000356435 OR10S1Q8NGN2 331 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms