RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 NIPBLQ6KC79 2804 aaeCLIP3.12□□□□□ -1.91
CNOT4-202ENST00000356162 SVEP1Q4LDE5 3571 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 ATP6V0E1O15342 81 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 HRASP01112 189 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 RLN1P04808 185 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 CTSDP07339 412 aaPredicted RBP3.12□□□□□ -1.91
CNOT4-202ENST00000356162 ELANEP08246 267 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 FGF2P09038 288 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 ZNF735P0CB33 412 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 SAA1P0DJI8 122 aaPredicted RBP3.12□□□□□ -1.91
CNOT4-202ENST00000356162 CD28P10747 220 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 GNRHRP30968 328 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 PPP5CP53041 499 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 LINC00205P59089 165 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 TAS2R31P59538 309 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 NDPQ00604 133 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 FOXE3Q13461 319 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 KLF9Q13886 244 aaPredicted RBP3.12□□□□□ -1.91
CNOT4-202ENST00000356162 C19orf54Q5BKX5 351 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 OR2B11Q5JQS5 317 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 PRR31Q5SQ13 230 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 LIN54Q6MZP7 749 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 CENPVQ7Z7K6 275 aaPredicted RBP3.12□□□□□ -1.91
CNOT4-202ENST00000356162 SPAG16Q8N0X2 631 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 PUSL1Q8N0Z8 303 aaKnown RBP3.12□□□□□ -1.91
CNOT4-202ENST00000356162 CADM3Q8N126 398 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 RNF152Q8N8N0 203 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 GDPD1Q8N9F7 314 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 CCDC71LQ8N9Z2 235 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 OR5AU1Q8NGC0 362 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 OR51H1Q8NH63 302 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 ZFAND1Q8TCF1 268 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 ARPC1AQ92747 370 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 PRRT1Q99946 306 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 PLEKHA2Q9HB19 425 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 PTTG2Q9NZH5 202 aa3.12□□□□□ -1.91
CNOT4-202ENST00000356162 FBN1P35555 2871 aaKnown RBP3.12□□□□□ -1.91
CNOT4-202ENST00000356162 TRAV41A0A0B4J266 112 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 H0Y980 276 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 H3BUA1 57 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 ARPC1BO15143 372 aaKnown RBP3.11□□□□□ -1.91
CNOT4-202ENST00000356162 TNFSF12O43508 249 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 PGLYRP1O75594 196 aaPredicted RBP3.11□□□□□ -1.91
CNOT4-202ENST00000356162 B3GALNT1O75752 331 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 KBTBD11O94819 623 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 HPRT1P00492 218 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 IGHG4P01861 327 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 SLC6A1P30531 599 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 MAS1LP35410 378 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 ERVK-16P61578 105 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 RPL23AP62750 156 aaKnown RBP3.11□□□□□ -1.91
CNOT4-202ENST00000356162 CX3CL1P78423 397 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 CD83Q01151 205 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 PRSS8Q16651 343 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 CNPY1Q3B7I2 92 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 PHLDA2Q53GA4 152 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 CXorf66Q5JRM2 361 aaPredicted RBP3.11□□□□□ -1.91
CNOT4-202ENST00000356162 TRIQKQ629K1 86 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 ZNF562Q6V9R5 426 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 PPP1R27Q86WC6 154 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 MMD2Q8IY49 270 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 Q8N402 240 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 OR4D10Q8NGI6 311 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 TMEM167AQ8TBQ9 72 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 ABHD5Q8WTS1 349 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 TMEM68Q96MH6 324 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 NOL4LQ96MY1 436 aaPredicted RBP3.11□□□□□ -1.91
CNOT4-202ENST00000356162 SCGB3A2Q96PL1 93 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 THAP7Q9BT49 309 aaPredicted RBP3.11□□□□□ -1.91
CNOT4-202ENST00000356162 SLC2A9Q9NRM0 540 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 ZFP57Q9NU63 452 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 BET1LQ9NYM9 111 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 SCP2D1Q9UJQ7 156 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 C14orf166Q9Y224 244 aaKnown RBP3.11□□□□□ -1.91
CNOT4-202ENST00000356162 FOXA2Q9Y261 457 aaPredicted RBP3.11□□□□□ -1.91
CNOT4-202ENST00000356162 TSSC4Q9Y5U2 329 aaPredicted RBP3.11□□□□□ -1.91
CNOT4-202ENST00000356162 ATRQ13535 2644 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 TCRBV4S1A1TA0A5B7 111 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 SRRM4A7MD48 611 aaKnown RBP3.11□□□□□ -1.91
CNOT4-202ENST00000356162 OR2A4O95047 310 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 S1PR2O95136 353 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 NQO2P16083 231 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 F2RP25116 425 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 BRWD1-AS2P59051 145 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 SSBP2P81877 361 aaPredicted RBP3.11□□□□□ -1.91
CNOT4-202ENST00000356162 ZNF45Q02386 682 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 SRSF4Q08170 494 aaKnown RBP3.11□□□□□ -1.91
CNOT4-202ENST00000356162 TMEM267Q0VDI3 215 aaPredicted RBP3.11□□□□□ -1.91
CNOT4-202ENST00000356162 FXYD3Q14802 87 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 ECSCRQ19T08 205 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 MRGPRG-AS1Q2M3A8 158 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 SCGB2B2Q4G0G5 96 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 THOC7Q6I9Y2 204 aaKnown RBP3.11□□□□□ -1.91
CNOT4-202ENST00000356162 TEX38Q6PEX7 206 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 TBC1D26Q86UD7 250 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 TOMM5Q8N4H5 51 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 OR5M8Q8NGP6 311 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 OR13C8Q8NGS7 320 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 TERB2Q8NHR7 220 aa3.11□□□□□ -1.91
CNOT4-202ENST00000356162 GRPEL2Q8TAA5 225 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms