RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 RRNAD1Q96FB5 475 aaKnown RBP19.31■□□□□ 0.68
CHKA-202ENST00000356135 POMT1Q9Y6A1 747 aa19.31■□□□□ 0.68
CHKA-202ENST00000356135 ANK3Q12955 4377 aaKnown RBP19.31■□□□□ 0.68
CHKA-202ENST00000356135 ST8SIA3O43173 380 aa19.3■□□□□ 0.68
CHKA-202ENST00000356135 RBFOX2O43251 390 aaKnown RBP eCLIP19.3■□□□□ 0.68
CHKA-202ENST00000356135 VENTXO95231 258 aa19.3■□□□□ 0.68
CHKA-202ENST00000356135 IGKV1D-33P01593 117 aa19.3■□□□□ 0.68
CHKA-202ENST00000356135 IGKV1-33P01594 117 aa19.3■□□□□ 0.68
CHKA-202ENST00000356135 HNF4GQ14541 408 aa19.3■□□□□ 0.68
CHKA-202ENST00000356135 IZUMO4Q1ZYL8 232 aa19.3■□□□□ 0.68
CHKA-202ENST00000356135 DEFB112Q30KQ8 113 aa19.3■□□□□ 0.68
CHKA-202ENST00000356135 TEX261Q6UWH6 196 aa19.3■□□□□ 0.68
CHKA-202ENST00000356135 SSX9Q7RTT3 188 aa19.3■□□□□ 0.68
CHKA-202ENST00000356135 FLYWCH2Q96CP2 140 aaKnown RBP19.3■□□□□ 0.68
CHKA-202ENST00000356135 AQP10Q96PS8 301 aa19.3■□□□□ 0.68
CHKA-202ENST00000356135 MEGF9Q9H1U4 602 aa19.3■□□□□ 0.68
CHKA-202ENST00000356135 LSM5Q9Y4Y9 91 aaKnown RBP19.3■□□□□ 0.68
CHKA-202ENST00000356135 U3KQ87 197 aa19.3■□□□□ 0.68
CHKA-202ENST00000356135 PITX3O75364 302 aa19.29■□□□□ 0.68
CHKA-202ENST00000356135 SNRNP70P08621 437 aaKnown RBP19.29■□□□□ 0.68
CHKA-202ENST00000356135 TAGLNQ01995 201 aaKnown RBP19.29■□□□□ 0.68
CHKA-202ENST00000356135 FOXRED2Q8IWF2 684 aa19.29■□□□□ 0.68
CHKA-202ENST00000356135 GPR146Q96CH1 333 aa19.29■□□□□ 0.68
CHKA-202ENST00000356135 PLEKHA2Q9HB19 425 aa19.29■□□□□ 0.68
CHKA-202ENST00000356135 RRASP10301 218 aa19.29■□□□□ 0.68
CHKA-202ENST00000356135 CNTFRP26992 372 aa19.29■□□□□ 0.68
CHKA-202ENST00000356135 CD1BP29016 333 aa19.29■□□□□ 0.68
CHKA-202ENST00000356135 AKR1C2P52895 323 aa19.29■□□□□ 0.68
CHKA-202ENST00000356135 BPIFB3P59826 476 aa19.29■□□□□ 0.68
CHKA-202ENST00000356135 RPS16P62249 146 aaKnown RBP19.29■□□□□ 0.68
CHKA-202ENST00000356135 OR8H1Q8NGG4 311 aa19.29■□□□□ 0.68
CHKA-202ENST00000356135 RNASE11Q8TAA1 199 aaKnown RBP19.29■□□□□ 0.68
CHKA-202ENST00000356135 R3HDM4Q96D70 268 aa19.29■□□□□ 0.68
CHKA-202ENST00000356135 SHOXO15266 292 aa19.28■□□□□ 0.68
CHKA-202ENST00000356135 BCL2L11O43521 198 aa19.28■□□□□ 0.68
CHKA-202ENST00000356135 ATG12O94817 140 aa19.28■□□□□ 0.68
CHKA-202ENST00000356135 FBP1P09467 338 aa19.28■□□□□ 0.68
CHKA-202ENST00000356135 NUP62P37198 522 aaPredicted RBP19.28■□□□□ 0.68
CHKA-202ENST00000356135 NKX2-1P43699 371 aaPredicted RBP19.28■□□□□ 0.68
CHKA-202ENST00000356135 HES1Q14469 280 aa19.28■□□□□ 0.68
CHKA-202ENST00000356135 CLEC9AQ6UXN8 241 aa19.28■□□□□ 0.68
CHKA-202ENST00000356135 OR4C13Q8NGP0 309 aa19.28■□□□□ 0.68
CHKA-202ENST00000356135 RCL1Q9Y2P8 373 aaKnown RBP19.28■□□□□ 0.68
CHKA-202ENST00000356135 TLN2Q9Y4G6 2542 aa19.27■□□□□ 0.68
CHKA-202ENST00000356135 E5RGE8 158 aa19.27■□□□□ 0.68
CHKA-202ENST00000356135 P0C879 139 aa19.27■□□□□ 0.68
CHKA-202ENST00000356135 FOSL1P15407 271 aa19.27■□□□□ 0.68
CHKA-202ENST00000356135 SRP14P37108 136 aaKnown RBP19.27■□□□□ 0.68
CHKA-202ENST00000356135 TMEM177Q53S58 311 aa19.27■□□□□ 0.68
CHKA-202ENST00000356135 HARBI1Q96MB7 349 aa19.27■□□□□ 0.68
CHKA-202ENST00000356135 NSG2Q9Y328 171 aa19.27■□□□□ 0.68
CHKA-202ENST00000356135 MMP24Q9Y5R2 645 aa19.27■□□□□ 0.68
CHKA-202ENST00000356135 KANTRA0A1W2PQU2 76 aa19.27■□□□□ 0.67
CHKA-202ENST00000356135 MSGN1A6NI15 193 aa19.27■□□□□ 0.67
CHKA-202ENST00000356135 FAM90A9PA6NNJ1 464 aa19.27■□□□□ 0.67
CHKA-202ENST00000356135 KCNAB3O43448 404 aa19.27■□□□□ 0.67
CHKA-202ENST00000356135 ID3Q02535 119 aa19.27■□□□□ 0.67
CHKA-202ENST00000356135 DHRS7BQ6IAN0 325 aaPredicted RBP19.27■□□□□ 0.67
CHKA-202ENST00000356135 ZNF680Q8NEM1 530 aa19.27■□□□□ 0.67
CHKA-202ENST00000356135 PIFOQ8TCI5 191 aa19.27■□□□□ 0.67
CHKA-202ENST00000356135 EAF1Q96JC9 268 aaPredicted RBP19.27■□□□□ 0.67
CHKA-202ENST00000356135 ZNF48Q96MX3 618 aaPredicted RBP19.27■□□□□ 0.67
CHKA-202ENST00000356135 SSX3Q99909 188 aa19.27■□□□□ 0.67
CHKA-202ENST00000356135 MARCH11A6NNE9 402 aa19.26■□□□□ 0.67
CHKA-202ENST00000356135 NQO2P16083 231 aa19.26■□□□□ 0.67
CHKA-202ENST00000356135 BRS3P32247 399 aa19.26■□□□□ 0.67
CHKA-202ENST00000356135 C9orf139Q6ZV77 190 aa19.26■□□□□ 0.67
CHKA-202ENST00000356135 SLC51BQ86UW2 128 aa19.26■□□□□ 0.67
CHKA-202ENST00000356135 DMBX1Q8NFW5 382 aa19.26■□□□□ 0.67
CHKA-202ENST00000356135 C11orf1Q9H5F2 150 aa19.26■□□□□ 0.67
CHKA-202ENST00000356135 COA4Q9NYJ1 87 aa19.26■□□□□ 0.67
CHKA-202ENST00000356135 HIVEP1P15822 2718 aa19.25■□□□□ 0.67
CHKA-202ENST00000356135 ARHGDIBP52566 201 aa19.25■□□□□ 0.67
CHKA-202ENST00000356135 Q6ZRM9 215 aa19.25■□□□□ 0.67
CHKA-202ENST00000356135 OSR1Q8TAX0 266 aaPredicted RBP19.25■□□□□ 0.67
CHKA-202ENST00000356135 RHOVQ96L33 236 aa19.25■□□□□ 0.67
CHKA-202ENST00000356135 CACNG5Q9UF02 275 aa19.25■□□□□ 0.67
CHKA-202ENST00000356135 MOSP00540 346 aa19.24■□□□□ 0.67
CHKA-202ENST00000356135 IGLV2-23P01705 113 aa19.24■□□□□ 0.67
CHKA-202ENST00000356135 HKR1P10072 659 aa19.24■□□□□ 0.67
CHKA-202ENST00000356135 F2RL1P55085 397 aa19.24■□□□□ 0.67
CHKA-202ENST00000356135 CXorf66Q5JRM2 361 aaPredicted RBP19.24■□□□□ 0.67
CHKA-202ENST00000356135 CFDP00746 253 aaPredicted RBP19.24■□□□□ 0.67
CHKA-202ENST00000356135 IFNA7P01567 189 aa19.24■□□□□ 0.67
CHKA-202ENST00000356135 OR2T10Q8NGZ9 312 aa19.24■□□□□ 0.67
CHKA-202ENST00000356135 ARPC5LQ9BPX5 153 aa19.24■□□□□ 0.67
CHKA-202ENST00000356135 TRAV3A0A0B4J244 114 aa19.23■□□□□ 0.67
CHKA-202ENST00000356135 HRASP01112 189 aa19.23■□□□□ 0.67
CHKA-202ENST00000356135 FAM106CPP0CH98 169 aa19.23■□□□□ 0.67
CHKA-202ENST00000356135 RPL12P30050 165 aaKnown RBP19.23■□□□□ 0.67
CHKA-202ENST00000356135 P2RY1P47900 373 aa19.23■□□□□ 0.67
CHKA-202ENST00000356135 EXOSC2Q13868 293 aaKnown RBP19.23■□□□□ 0.67
CHKA-202ENST00000356135 EBI3Q14213 229 aa19.23■□□□□ 0.67
CHKA-202ENST00000356135 OR4A47Q6IF82 309 aa19.23■□□□□ 0.67
CHKA-202ENST00000356135 TEX29Q8N6K0 151 aa19.23■□□□□ 0.67
CHKA-202ENST00000356135 TMEM140Q9NV12 185 aa19.23■□□□□ 0.67
CHKA-202ENST00000356135 H3BUX3 64 aa19.22■□□□□ 0.67
CHKA-202ENST00000356135 OR9G9P0C7N8 305 aa19.22■□□□□ 0.67
CHKA-202ENST00000356135 SAA1P0DJI8 122 aaPredicted RBP19.22■□□□□ 0.67
CHKA-202ENST00000356135 TMEM11P17152 192 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms