RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 IGKV1D-12P01611 117 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 AAMDCQ9H7C9 122 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 NPVFQ9HCQ7 196 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 CLDN16Q9Y5I7 305 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 RALGAPA1Q6GYQ0 2036 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 DENND4CQ5VZ89 1909 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 SPCS3P61009 180 aa10.41□□□□□ -0.74
COLCA1-201ENST00000355430 ELOBQ15370 118 aa10.41□□□□□ -0.74
COLCA1-201ENST00000355430 STARD4Q96DR4 205 aa10.41□□□□□ -0.74
COLCA1-201ENST00000355430 OR4C5Q8NGB2 326 aa10.41□□□□□ -0.74
COLCA1-201ENST00000355430 PRNDQ9UKY0 176 aa10.41□□□□□ -0.74
COLCA1-201ENST00000355430 IGKV1-27A0A075B6S5 117 aa10.41□□□□□ -0.74
COLCA1-201ENST00000355430 TFF3Q07654 80 aa10.41□□□□□ -0.74
COLCA1-201ENST00000355430 TCF15Q12870 199 aa10.41□□□□□ -0.74
COLCA1-201ENST00000355430 MST1LQ2TV78 715 aa10.41□□□□□ -0.74
COLCA1-201ENST00000355430 HEPN1Q6WQI6 88 aa10.41□□□□□ -0.74
COLCA1-201ENST00000355430 VPS25Q9BRG1 176 aa10.41□□□□□ -0.74
COLCA1-201ENST00000355430 SDF2L1Q9HCN8 221 aa10.41□□□□□ -0.74
COLCA1-201ENST00000355430 MARCH11A6NNE9 402 aa10.41□□□□□ -0.74
COLCA1-201ENST00000355430 APCSP02743 223 aa10.41□□□□□ -0.74
COLCA1-201ENST00000355430 ZNF525Q8N782 197 aa10.41□□□□□ -0.74
COLCA1-201ENST00000355430 ZNF581Q9P0T4 197 aa10.41□□□□□ -0.74
COLCA1-201ENST00000355430 HILPDAQ9Y5L2 63 aa10.41□□□□□ -0.74
COLCA1-201ENST00000355430 DIRC3C9JPN6 131 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 J3QR06 171 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 PF4P02776 101 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 WNT5AP41221 380 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 OR4F17Q8NGA8 305 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 ELOVL1Q9BW60 279 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 TIMP3P35625 211 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 C20orf204Q6ZNR8 217 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 PDPNQ86YL7 162 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 VKORC1L1Q8N0U8 176 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 OR8I2Q8N0Y5 310 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 FGFBP3Q8TAT2 258 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 NABP1Q96AH0 204 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 DCTN5Q9BTE1 182 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 QTRT1Q9BXR0 403 aaKnown RBP10.4□□□□□ -0.74
COLCA1-201ENST00000355430 RALYQ9UKM9 306 aaKnown RBP10.4□□□□□ -0.74
COLCA1-201ENST00000355430 GRIFINA4D1Z8 144 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 SS18L1O75177 396 aaPredicted RBP10.4□□□□□ -0.74
COLCA1-201ENST00000355430 LYL1P12980 280 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 HARBI1Q96MB7 349 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 MRPL18Q9H0U6 180 aaKnown RBP10.4□□□□□ -0.74
COLCA1-201ENST00000355430 MPDU1O75352 247 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 NEURL1O76050 574 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 OR5I1Q13606 314 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 PCSK4Q6UW60 755 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 RNF2Q99496 336 aa10.4□□□□□ -0.74
COLCA1-201ENST00000355430 REPIN1Q9BWE0 567 aaKnown RBP10.4□□□□□ -0.74
COLCA1-201ENST00000355430 PEAR1Q5VY43 1037 aaPredicted RBP10.4□□□□□ -0.75
COLCA1-201ENST00000355430 DNM1P46Q6ZS02 220 aa10.4□□□□□ -0.75
COLCA1-201ENST00000355430 FA2HQ7L5A8 372 aa10.4□□□□□ -0.75
COLCA1-201ENST00000355430 PF4V1P10720 104 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 HTR1DP28221 377 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 PTGDSP41222 190 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 COX19Q49B96 90 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 LRTM2Q8N967 370 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 SPTBN2O15020 2390 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 WNT9BO14905 357 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 SLC31A2O15432 143 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 GNG7O60262 68 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 HIST1H2BKO60814 126 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 HIST1H2BJP06899 126 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 SNRPCP09234 159 aaKnown RBP10.39□□□□□ -0.75
COLCA1-201ENST00000355430 CXCL1P09341 107 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 CRYGSP22914 178 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 HIST1H2BOP23527 126 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 MC5RP33032 325 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 HIST1H2BBP33778 126 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 SSTR5P35346 364 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 CLDN18P56856 261 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 HIST1H2BDP58876 126 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 ARF6P62330 175 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 HIST1H2BCP62807 126 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 HIST2H2BEQ16778 126 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.39□□□□□ -0.75
COLCA1-201ENST00000355430 OR4X1Q8NH49 305 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 HIST1H2BHQ93079 126 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 HIST1H2BNQ99877 126 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 HIST1H2BMQ99879 126 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 NPCDR1Q9BY65 106 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 KIAA1671Q9BY89 1806 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 ZNF729A6NN14 1252 aaPredicted RBP10.39□□□□□ -0.75
COLCA1-201ENST00000355430 CECR9P0C854 216 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 LHX2P50458 406 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 C10orf113Q5VZT2 155 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 BET1LQ9NYM9 111 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 TMEM250H0YL14 139 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 ZIC4Q8N9L1 334 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 BCL2L2Q92843 193 aaPredicted RBP10.39□□□□□ -0.75
COLCA1-201ENST00000355430 TMEM106BQ9NUM4 274 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 HEATR5AQ86XA9 2040 aa10.39□□□□□ -0.75
COLCA1-201ENST00000355430 ODAMA1E959 279 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 MPV17P39210 176 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 PTTG1IPP53801 180 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 HOXA4Q00056 320 aaPredicted RBP10.38□□□□□ -0.75
COLCA1-201ENST00000355430 C5orf24Q7Z6I8 188 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 NUP37Q8NFH4 326 aa10.38□□□□□ -0.75
COLCA1-201ENST00000355430 METRNQ9UJH8 293 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms