RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 NR2C2APQ86WQ0 139 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 KIR2DL4Q99706 377 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 PPIAL4AQ9Y536 164 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 DOCK1Q14185 1865 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 PGPEP1LA6NFU8 196 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 RIPPLY3P57055 190 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 PNKDQ8N490 385 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 METTL26Q96S19 204 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 RPP21Q9H633 154 aaKnown RBP10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 CALYQ9NYX4 217 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 KNL1Q8NG31 2342 aa10.85□□□□□ -0.67
SYNCRIP-201ENST00000355238 HTN1P15515 57 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 TIMM23BQ5SRD1 257 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 ZNF441Q8N8Z8 693 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 DIRC2Q96SL1 478 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 FNDC4Q9H6D8 234 aaPredicted RBP10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 IDI2-AS1Q9NZ38 188 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 A0A1W2PRD5 423 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 A0A1W2PRF3 423 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 A0A1W2PRM7 423 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 FCGR2BP31994 310 aaPredicted RBP10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 SOX8P57073 446 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 DICER1Q9UPY3 1922 aaKnown RBP10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 PEX7O00628 323 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 CGAP01215 116 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 RAB9AP51151 201 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 GPR82Q96P67 336 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 SPINT1O43278 529 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 GFRA1P56159 465 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 A0A1B0GW64 132 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 ATXN7O15265 892 aaPredicted RBP10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 SS18L1O75177 396 aaPredicted RBP10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 THY1P04216 161 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 SMIM10L1P0DMW3 83 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 SLC25A28Q96A46 364 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 SMIM10Q96HG1 83 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 C18orf12Q96KH6 178 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 IGKV3-7A0A075B6H7 116 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 SHISA7A6NL88 538 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 MFAP4P55083 255 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 PCSK4Q6UW60 755 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 NUDT10Q8NFP7 164 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 ORAOV1Q8WV07 137 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 KLK15Q9H2R5 256 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 ST20Q9HBF5 79 aa10.84□□□□□ -0.67
SYNCRIP-201ENST00000355238 SIPA1L3O60292 1781 aaPredicted RBP10.83□□□□□ -0.67
SYNCRIP-201ENST00000355238 A0A1W2PS18 150 aa10.83□□□□□ -0.68
SYNCRIP-201ENST00000355238 A6NNC1 897 aa10.83□□□□□ -0.68
SYNCRIP-201ENST00000355238 ECSCRQ19T08 205 aa10.83□□□□□ -0.68
SYNCRIP-201ENST00000355238 OR2K2Q8NGT1 345 aa10.83□□□□□ -0.68
SYNCRIP-201ENST00000355238 FMC1Q96HJ9 113 aa10.83□□□□□ -0.68
SYNCRIP-201ENST00000355238 GNB1LQ9BYB4 327 aa10.83□□□□□ -0.68
SYNCRIP-201ENST00000355238 ARRDC1-AS1Q9H2J1 176 aa10.83□□□□□ -0.68
SYNCRIP-201ENST00000355238 TFF3Q07654 80 aa10.83□□□□□ -0.68
SYNCRIP-201ENST00000355238 RPP25Q9BUL9 199 aaKnown RBP10.83□□□□□ -0.68
SYNCRIP-201ENST00000355238 TMEM50AO95807 157 aa10.83□□□□□ -0.68
SYNCRIP-201ENST00000355238 SGK494Q96LW2 274 aa10.83□□□□□ -0.68
SYNCRIP-201ENST00000355238 TUBGCP6Q96RT7 1819 aa10.83□□□□□ -0.68
SYNCRIP-201ENST00000355238 PPP1R17O96001 155 aa10.83□□□□□ -0.68
SYNCRIP-201ENST00000355238 IGFBP3P17936 291 aaPredicted RBP10.83□□□□□ -0.68
SYNCRIP-201ENST00000355238 ACSF3Q4G176 576 aaPredicted RBP10.83□□□□□ -0.68
SYNCRIP-201ENST00000355238 BRWD1Q9NSI6 2320 aa10.83□□□□□ -0.68
SYNCRIP-201ENST00000355238 TFPI2P48307 235 aa10.83□□□□□ -0.68
SYNCRIP-201ENST00000355238 C10orf128Q5T292 105 aa10.83□□□□□ -0.68
SYNCRIP-201ENST00000355238 LINC00305Q7Z4B0 112 aa10.83□□□□□ -0.68
SYNCRIP-201ENST00000355238 C18orf15Q96N68 181 aa10.83□□□□□ -0.68
SYNCRIP-201ENST00000355238 H0YIZ8 118 aa10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 TYMSP04818 313 aa10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 CCL20P78556 96 aa10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 CCDC88CQ9P219 2028 aa10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 TMEM229AB2RXF0 380 aa10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 GCSAMLQ5JQS6 135 aa10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 SSBP4Q9BWG4 385 aaPredicted RBP10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 FBLN5Q9UBX5 448 aa10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 HILPDAQ9Y5L2 63 aa10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 ANKRD31Q8N7Z5 1873 aa10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 C21orf140B9A014 251 aa10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 TM4SF20Q53R12 229 aa10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 APOBEC4Q8WW27 367 aaKnown RBP10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 NPIPB3Q92617 1050 aa10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 CCL13Q99616 98 aa10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 OSTCQ9NRP0 149 aa10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 NDUFS6O75380 124 aaKnown RBP10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 EGR4Q05215 589 aa10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 OR4C13Q8NGP0 309 aa10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 C4orf51C9J302 202 aa10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 EBLN2Q6P2I7 272 aa10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 FOXC2Q99958 501 aa10.82□□□□□ -0.68
SYNCRIP-201ENST00000355238 TRAV8-2A0A0B4J237 113 aa10.81□□□□□ -0.68
SYNCRIP-201ENST00000355238 ZIC3O60481 467 aa10.81□□□□□ -0.68
SYNCRIP-201ENST00000355238 IGHV4-34P06331 123 aa10.81□□□□□ -0.68
SYNCRIP-201ENST00000355238 NBEAP1P0C6P0 100 aa10.81□□□□□ -0.68
SYNCRIP-201ENST00000355238 ORMDL3Q8N138 153 aa10.81□□□□□ -0.68
SYNCRIP-201ENST00000355238 MS4A6AQ9H2W1 248 aa10.81□□□□□ -0.68
SYNCRIP-201ENST00000355238 TRPM6Q9BX84 2022 aa10.81□□□□□ -0.68
SYNCRIP-201ENST00000355238 CXCL1P09341 107 aa10.81□□□□□ -0.68
SYNCRIP-201ENST00000355238 PYY3Q5JQD4 70 aa10.81□□□□□ -0.68
SYNCRIP-201ENST00000355238 MEIG1Q5JSS6 88 aa10.81□□□□□ -0.68
SYNCRIP-201ENST00000355238 GLI3P10071 1580 aa10.81□□□□□ -0.68
SYNCRIP-201ENST00000355238 SCN3AQ9NY46 2000 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms