RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 C2orf70A6NJV1 201 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 NPIPB5A8MRT5 1133 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 SSX5O60225 188 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 TPPPO94811 219 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 HLA-AP01891 365 aaKnown RBP10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 FGF9P31371 208 aaPredicted RBP10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 RPL27AP46776 148 aaKnown RBP10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 BRWD1-AS2P59051 145 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 VSTM2AQ8TAG5 236 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 TMEM167AQ8TBQ9 72 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 OR2A7Q96R45 310 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 FAM110AQ9BQ89 295 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 TXNL4BQ9NX01 149 aaKnown RBP10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 SLC2A8Q9NY64 477 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 ANXA10Q9UJ72 324 aa10.91□□□□□ -0.66
PRPF40A-201ENST00000354363 BIRC6Q9NR09 4857 aa10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 RBMY1BA6NDE4 496 aaKnown RBP10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 RBMY1EA6NEQ0 496 aaKnown RBP10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 GGCTO75223 188 aaKnown RBP10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 OR2C1O95371 312 aa10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 RBMY1DP0C7P1 496 aaKnown RBP10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 FOLR2P14207 255 aa10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 MAS1LP35410 378 aa10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 KIR2DS2P43631 304 aa10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 GNG2P59768 71 aa10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 GABARAPL2P60520 117 aa10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 PLECQ15149 4684 aaKnown RBP10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 UBE2UQ5VVX9 321 aa10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 MFSD4AQ8N468 514 aa10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 DEFB125Q8N687 156 aa10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 FANCD2OSQ96PS1 177 aa10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 FYTTD1Q96QD9 318 aaKnown RBP10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 WFDC10AQ9H1F0 79 aa10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 ZC4H2Q9NQZ6 224 aa10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 SLC2A9Q9NRM0 540 aa10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 FBXL7Q9UJT9 491 aa10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 SPATA2Q9UM82 520 aa10.9□□□□□ -0.66
PRPF40A-201ENST00000354363 LGALS9O00182 355 aa10.89□□□□□ -0.67
PRPF40A-201ENST00000354363 MRPS14O60783 128 aaKnown RBP10.89□□□□□ -0.67
PRPF40A-201ENST00000354363 SCGNO76038 276 aa10.89□□□□□ -0.67
PRPF40A-201ENST00000354363 IGHV3-23P01764 117 aa10.89□□□□□ -0.67
PRPF40A-201ENST00000354363 ZNF735P0CB33 412 aa10.89□□□□□ -0.67
PRPF40A-201ENST00000354363 GUCA2BQ16661 112 aa10.89□□□□□ -0.67
PRPF40A-201ENST00000354363 ZNF66Q6ZN08 573 aa10.89□□□□□ -0.67
PRPF40A-201ENST00000354363 TPRA1Q86W33 373 aa10.89□□□□□ -0.67
PRPF40A-201ENST00000354363 CCDC140Q96MF4 163 aa10.89□□□□□ -0.67
PRPF40A-201ENST00000354363 SRD5A3Q9H8P0 318 aa10.89□□□□□ -0.67
PRPF40A-201ENST00000354363 TAS2R8Q9NYW2 309 aa10.89□□□□□ -0.67
PRPF40A-201ENST00000354363 TECRQ9NZ01 308 aaKnown RBP10.89□□□□□ -0.67
PRPF40A-201ENST00000354363 DAPK2Q9UIK4 370 aa10.89□□□□□ -0.67
PRPF40A-201ENST00000354363 RAB26Q9ULW5 256 aa10.89□□□□□ -0.67
PRPF40A-201ENST00000354363 DPPA5A6NC42 116 aa10.88□□□□□ -0.67
PRPF40A-201ENST00000354363 OR11H12B2RN74 326 aa10.88□□□□□ -0.67
PRPF40A-201ENST00000354363 NDUFB8O95169 186 aa10.88□□□□□ -0.67
PRPF40A-201ENST00000354363 CRYGCP07315 174 aa10.88□□□□□ -0.67
PRPF40A-201ENST00000354363 AREGP15514 252 aa10.88□□□□□ -0.67
PRPF40A-201ENST00000354363 GPHB5Q86YW7 130 aa10.88□□□□□ -0.67
PRPF40A-201ENST00000354363 LGALS14Q8TCE9 139 aa10.88□□□□□ -0.67
PRPF40A-201ENST00000354363 WDR89Q96FK6 387 aaPredicted RBP10.88□□□□□ -0.67
PRPF40A-201ENST00000354363 GPHA2Q96T91 129 aa10.88□□□□□ -0.67
PRPF40A-201ENST00000354363 RRP15Q9Y3B9 282 aaKnown RBP10.88□□□□□ -0.67
PRPF40A-201ENST00000354363 S4R3C0 116 aa10.88□□□□□ -0.67
PRPF40A-201ENST00000354363 PSMB9P28065 219 aa10.87□□□□□ -0.67
PRPF40A-201ENST00000354363 PSMB6P28072 239 aa10.87□□□□□ -0.67
PRPF40A-201ENST00000354363 ARL3P36405 182 aa10.87□□□□□ -0.67
PRPF40A-201ENST00000354363 KLK9Q2XQG4 91 aa10.87□□□□□ -0.67
PRPF40A-201ENST00000354363 SFXN4Q6P4A7 337 aa10.87□□□□□ -0.67
PRPF40A-201ENST00000354363 CLEC19AQ6UXS0 136 aa10.87□□□□□ -0.67
PRPF40A-201ENST00000354363 SSX9Q7RTT3 188 aa10.87□□□□□ -0.67
PRPF40A-201ENST00000354363 SPARTQ8N0X7 666 aa10.87□□□□□ -0.67
PRPF40A-201ENST00000354363 CACNG8Q8WXS5 425 aa10.87□□□□□ -0.67
PRPF40A-201ENST00000354363 RHBDL2Q9NX52 303 aa10.87□□□□□ -0.67
PRPF40A-201ENST00000354363 KLK9Q9UKQ9 250 aa10.87□□□□□ -0.67
PRPF40A-201ENST00000354363 SELENOKQ9Y6D0 94 aa10.87□□□□□ -0.67
PRPF40A-201ENST00000354363 HRASP01112 189 aa10.87□□□□□ -0.67
PRPF40A-201ENST00000354363 MYOD1P15172 320 aa10.87□□□□□ -0.67
PRPF40A-201ENST00000354363 CTRB1P17538 263 aa10.87□□□□□ -0.67
PRPF40A-201ENST00000354363 CBLN1P23435 193 aa10.87□□□□□ -0.67
PRPF40A-201ENST00000354363 RPL8P62917 257 aaKnown RBP10.87□□□□□ -0.67
PRPF40A-201ENST00000354363 CTRB2Q6GPI1 263 aa10.87□□□□□ -0.67
PRPF40A-201ENST00000354363 IL17DQ8TAD2 202 aa10.87□□□□□ -0.67
PRPF40A-201ENST00000354363 SECTM1Q8WVN6 248 aa10.87□□□□□ -0.67
PRPF40A-201ENST00000354363 CCL28Q9NRJ3 127 aa10.87□□□□□ -0.67
PRPF40A-201ENST00000354363 TMEM213A2RRL7 107 aa10.86□□□□□ -0.67
PRPF40A-201ENST00000354363 CGB1A6NKQ9 187 aa10.86□□□□□ -0.67
PRPF40A-201ENST00000354363 TNFSF12O43508 249 aa10.86□□□□□ -0.67
PRPF40A-201ENST00000354363 DHFRP00374 187 aa10.86□□□□□ -0.67
PRPF40A-201ENST00000354363 PTHLHP12272 177 aa10.86□□□□□ -0.67
PRPF40A-201ENST00000354363 TIMM50Q3ZCQ8 353 aa10.86□□□□□ -0.67
PRPF40A-201ENST00000354363 GVQW1Q8N7I0 195 aa10.86□□□□□ -0.67
PRPF40A-201ENST00000354363 BEST4Q8NFU0 473 aa10.86□□□□□ -0.67
PRPF40A-201ENST00000354363 EEF1AKMT3Q96AZ1 226 aa10.86□□□□□ -0.67
PRPF40A-201ENST00000354363 BET1LQ9NYM9 111 aa10.86□□□□□ -0.67
PRPF40A-201ENST00000354363 SSR3Q9UNL2 185 aa10.86□□□□□ -0.67
PRPF40A-201ENST00000354363 A8MWP6 167 aa10.85□□□□□ -0.67
PRPF40A-201ENST00000354363 REG1AP05451 166 aa10.85□□□□□ -0.67
PRPF40A-201ENST00000354363 HIST1H1BP16401 226 aaKnown RBP10.85□□□□□ -0.67
PRPF40A-201ENST00000354363 HLA-GP17693 338 aa10.85□□□□□ -0.67
PRPF40A-201ENST00000354363 FCGR2CP31995 323 aa10.85□□□□□ -0.67
PRPF40A-201ENST00000354363 SDC2P34741 201 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms