RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 A6NNC1 897 aa11.05□□□□□ -0.64
UBA3-201ENST00000349511 C15orf65H3BRN8 121 aa11.05□□□□□ -0.64
UBA3-201ENST00000349511 CYB5BO43169 146 aa11.05□□□□□ -0.64
UBA3-201ENST00000349511 BCL2P10415 239 aa11.05□□□□□ -0.64
UBA3-201ENST00000349511 PPOXP50336 477 aa11.05□□□□□ -0.64
UBA3-201ENST00000349511 LRRC75BQ2VPJ9 315 aa11.05□□□□□ -0.64
UBA3-201ENST00000349511 UTF1Q5T230 341 aa11.05□□□□□ -0.64
UBA3-201ENST00000349511 PSMG3Q9BT73 122 aaPredicted RBP11.05□□□□□ -0.64
UBA3-201ENST00000349511 GGACTQ9BVM4 153 aa11.05□□□□□ -0.64
UBA3-201ENST00000349511 SLC25A10Q9UBX3 287 aaPredicted RBP11.05□□□□□ -0.64
UBA3-201ENST00000349511 DOCK11Q5JSL3 2073 aa11.05□□□□□ -0.64
UBA3-201ENST00000349511 KMT2BQ9UMN6 2715 aaPredicted RBP11.04□□□□□ -0.64
UBA3-201ENST00000349511 B4DEV8 164 aa11.04□□□□□ -0.64
UBA3-201ENST00000349511 SRSF1Q07955 248 aaKnown RBP eCLIP11.04□□□□□ -0.64
UBA3-201ENST00000349511 EDARADDQ8WWZ3 215 aa11.04□□□□□ -0.64
UBA3-201ENST00000349511 LEAP2Q969E1 77 aa11.04□□□□□ -0.64
UBA3-201ENST00000349511 LURAP1Q96LR2 239 aa11.04□□□□□ -0.64
UBA3-201ENST00000349511 RAB1BQ9H0U4 201 aa11.04□□□□□ -0.64
UBA3-201ENST00000349511 LIN7CQ9NUP9 197 aaKnown RBP11.04□□□□□ -0.64
UBA3-201ENST00000349511 CTSZQ9UBR2 303 aa11.04□□□□□ -0.64
UBA3-201ENST00000349511 TRAV20A0A0B4J274 112 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 A1L4Q6 167 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 NKX6-3A6NJ46 265 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 IGHV2-70P01814 119 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 SPANXN5Q5MJ07 72 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 SPNS3Q6ZMD2 512 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 LILRB2Q8N423 598 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 H1FXQ92522 213 aaKnown RBP11.03□□□□□ -0.64
UBA3-201ENST00000349511 NINJ1Q92982 152 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 WDR61Q9GZS3 305 aaKnown RBP11.03□□□□□ -0.64
UBA3-201ENST00000349511 SPINT2O43291 252 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 HIST1H2BKO60814 126 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 TRGC2P03986 189 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 HIST1H2BJP06899 126 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 HIST1H2BOP23527 126 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 HIST1H2BBP33778 126 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 HIST1H2BDP58876 126 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 HIST1H2BCP62807 126 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 HBG1P69891 147 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 HBG2P69892 147 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 HIST2H2BEQ16778 126 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.03□□□□□ -0.64
UBA3-201ENST00000349511 TCF23Q7RTU1 214 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 DRAM1Q8N682 238 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 HIST1H2BHQ93079 126 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 RCC1LQ96I51 464 aaKnown RBP11.03□□□□□ -0.64
UBA3-201ENST00000349511 OR4C12Q96R67 309 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 HIST1H2BNQ99877 126 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 HIST1H2BMQ99879 126 aa11.03□□□□□ -0.64
UBA3-201ENST00000349511 DVL1O14640 695 aa11.02□□□□□ -0.64
UBA3-201ENST00000349511 GZMHP20718 246 aa11.02□□□□□ -0.64
UBA3-201ENST00000349511 SERF2P84101 59 aa11.02□□□□□ -0.64
UBA3-201ENST00000349511 PNRC1Q12796 327 aaPredicted RBP11.02□□□□□ -0.64
UBA3-201ENST00000349511 TMEM41BQ5BJD5 291 aa11.02□□□□□ -0.64
UBA3-201ENST00000349511 SDF2L1Q9HCN8 221 aa11.02□□□□□ -0.64
UBA3-201ENST00000349511 CALYQ9NYX4 217 aa11.02□□□□□ -0.64
UBA3-201ENST00000349511 GNG12Q9UBI6 72 aa11.02□□□□□ -0.64
UBA3-201ENST00000349511 CELSR2Q9HCU4 2923 aa11.02□□□□□ -0.65
UBA3-201ENST00000349511 ST8SIA5O15466 376 aa11.02□□□□□ -0.65
UBA3-201ENST00000349511 MMP23AO75900 390 aa11.02□□□□□ -0.65
UBA3-201ENST00000349511 ELLP55199 621 aaPredicted RBP11.02□□□□□ -0.65
UBA3-201ENST00000349511 PAX5Q02548 391 aa11.02□□□□□ -0.65
UBA3-201ENST00000349511 C17orf58Q2M2W7 97 aa11.02□□□□□ -0.65
UBA3-201ENST00000349511 FAM209BQ5JX69 171 aa11.02□□□□□ -0.65
UBA3-201ENST00000349511 MALRD1Q5VYJ5 2156 aa11.02□□□□□ -0.65
UBA3-201ENST00000349511 DTX2Q86UW9 622 aa11.02□□□□□ -0.65
UBA3-201ENST00000349511 OR13D1Q8NGV5 346 aa11.02□□□□□ -0.65
UBA3-201ENST00000349511 FAM210BQ96KR6 192 aa11.02□□□□□ -0.65
UBA3-201ENST00000349511 P2RX4Q99571 388 aa11.02□□□□□ -0.65
UBA3-201ENST00000349511 OR2D2Q9H210 308 aa11.02□□□□□ -0.65
UBA3-201ENST00000349511 GAR1Q9NY12 217 aaKnown RBP11.02□□□□□ -0.65
UBA3-201ENST00000349511 OR6C3Q9NZP0 311 aa11.02□□□□□ -0.65
UBA3-201ENST00000349511 VAX2Q9UIW0 290 aa11.02□□□□□ -0.65
UBA3-201ENST00000349511 NBPF19A0A087WUL8 3843 aa11.01□□□□□ -0.65
UBA3-201ENST00000349511 MED13LQ71F56 2210 aa11.01□□□□□ -0.65
UBA3-201ENST00000349511 ARHGAP32A7KAX9 2087 aa11.01□□□□□ -0.65
UBA3-201ENST00000349511 TRGV10A0A0A0MS01 117 aa11.01□□□□□ -0.65
UBA3-201ENST00000349511 CEBPZOSA8MTT3 80 aa11.01□□□□□ -0.65
UBA3-201ENST00000349511 TNFRSF13BO14836 293 aaPredicted RBP11.01□□□□□ -0.65
UBA3-201ENST00000349511 S100A2P29034 98 aa11.01□□□□□ -0.65
UBA3-201ENST00000349511 RND2P52198 227 aa11.01□□□□□ -0.65
UBA3-201ENST00000349511 LINC00205P59089 165 aa11.01□□□□□ -0.65
UBA3-201ENST00000349511 PYY3Q5JQD4 70 aa11.01□□□□□ -0.65
UBA3-201ENST00000349511 PARD6GQ9BYG4 376 aaPredicted RBP11.01□□□□□ -0.65
UBA3-201ENST00000349511 FAM234AQ9H0X4 552 aa11.01□□□□□ -0.65
UBA3-201ENST00000349511 TMEM242Q9NWH2 141 aa11.01□□□□□ -0.65
UBA3-201ENST00000349511 TRBV23-1A0A0A0MS06 115 aa11□□□□□ -0.65
UBA3-201ENST00000349511 UBE2L5PA0A1B0GUS4 154 aa11□□□□□ -0.65
UBA3-201ENST00000349511 MAP1LC3B2A6NCE7 125 aa11□□□□□ -0.65
UBA3-201ENST00000349511 CLDN34H7C241 214 aa11□□□□□ -0.65
UBA3-201ENST00000349511 NDUFB3O43676 98 aa11□□□□□ -0.65
UBA3-201ENST00000349511 CCL3L1P16619 93 aa11□□□□□ -0.65
UBA3-201ENST00000349511 RPL31P62899 125 aaKnown RBP11□□□□□ -0.65
UBA3-201ENST00000349511 SLC38A11Q08AI6 406 aa11□□□□□ -0.65
UBA3-201ENST00000349511 BTNL3Q6UXE8 466 aa11□□□□□ -0.65
UBA3-201ENST00000349511 TAF15Q92804 592 aaKnown RBP eCLIP11□□□□□ -0.65
UBA3-201ENST00000349511 PINX1Q96BK5 328 aaKnown RBP11□□□□□ -0.65
UBA3-201ENST00000349511 MAP1LC3BQ9GZQ8 125 aa11□□□□□ -0.65
UBA3-201ENST00000349511 RBKSQ9H477 322 aa11□□□□□ -0.65
UBA3-201ENST00000349511 PSG11Q9UQ72 335 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms