RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 DEPPQ9NTK1 212 aa13.08□□□□□ -0.32
PTPRO-202ENST00000348962 FBXL7Q9UJT9 491 aa13.08□□□□□ -0.32
PTPRO-202ENST00000348962 CACNA1HO95180 2353 aa13.08□□□□□ -0.32
PTPRO-202ENST00000348962 IGLV3-32A0A0A0MS00 114 aa13.08□□□□□ -0.32
PTPRO-202ENST00000348962 DSCR9P59020 149 aa13.08□□□□□ -0.32
PTPRO-202ENST00000348962 ASPHD2Q6ICH7 369 aa13.08□□□□□ -0.32
PTPRO-202ENST00000348962 SMIM8Q96KF7 97 aa13.08□□□□□ -0.32
PTPRO-202ENST00000348962 PACRGQ96M98 296 aaPredicted RBP13.08□□□□□ -0.32
PTPRO-202ENST00000348962 NPDC1Q9NQX5 325 aaPredicted RBP13.08□□□□□ -0.32
PTPRO-202ENST00000348962 CDC42EP3Q9UKI2 254 aa13.08□□□□□ -0.32
PTPRO-202ENST00000348962 M0R143 59 aa13.07□□□□□ -0.32
PTPRO-202ENST00000348962 MOSP00540 346 aa13.07□□□□□ -0.32
PTPRO-202ENST00000348962 ANOS1P23352 680 aa13.07□□□□□ -0.32
PTPRO-202ENST00000348962 OR8A1Q8NGG7 326 aa13.07□□□□□ -0.32
PTPRO-202ENST00000348962 MDC1Q14676 2089 aaKnown RBP13.07□□□□□ -0.32
PTPRO-202ENST00000348962 IGKV1D-43A0A0B4J1Z2 117 aa13.07□□□□□ -0.32
PTPRO-202ENST00000348962 IL18BPO95998 194 aa13.07□□□□□ -0.32
PTPRO-202ENST00000348962 TIMP3P35625 211 aa13.07□□□□□ -0.32
PTPRO-202ENST00000348962 HIST1H1AQ02539 215 aaPredicted RBP13.07□□□□□ -0.32
PTPRO-202ENST00000348962 FAM159AQ6UWV7 190 aa13.07□□□□□ -0.32
PTPRO-202ENST00000348962 MRPL32Q9BYC8 188 aaKnown RBP13.07□□□□□ -0.32
PTPRO-202ENST00000348962 AICDAQ9GZX7 198 aa13.07□□□□□ -0.32
PTPRO-202ENST00000348962 FUT9Q9Y231 359 aa13.07□□□□□ -0.32
PTPRO-202ENST00000348962 CKS2P33552 79 aa13.07□□□□□ -0.32
PTPRO-202ENST00000348962 SULT1A2P50226 295 aa13.07□□□□□ -0.32
PTPRO-202ENST00000348962 SNRPEP62304 92 aaKnown RBP13.07□□□□□ -0.32
PTPRO-202ENST00000348962 PEAR1Q5VY43 1037 aaPredicted RBP13.07□□□□□ -0.32
PTPRO-202ENST00000348962 ZNF343Q6P1L6 599 aa13.07□□□□□ -0.32
PTPRO-202ENST00000348962 FBLIM1Q8WUP2 373 aa13.07□□□□□ -0.32
PTPRO-202ENST00000348962 DPH3Q96FX2 82 aa13.07□□□□□ -0.32
PTPRO-202ENST00000348962 PRSS22Q9GZN4 317 aa13.07□□□□□ -0.32
PTPRO-202ENST00000348962 PLAURQ03405 335 aa13.06□□□□□ -0.32
PTPRO-202ENST00000348962 ISOC2Q96AB3 205 aa13.06□□□□□ -0.32
PTPRO-202ENST00000348962 MT-ND6P03923 174 aa13.06□□□□□ -0.32
PTPRO-202ENST00000348962 RPL29P47914 159 aaKnown RBP13.06□□□□□ -0.32
PTPRO-202ENST00000348962 RAB24Q969Q5 203 aa13.06□□□□□ -0.32
PTPRO-202ENST00000348962 NABP2Q9BQ15 211 aa13.06□□□□□ -0.32
PTPRO-202ENST00000348962 C21orf62Q9NYP8 219 aa13.06□□□□□ -0.32
PTPRO-202ENST00000348962 TRAV34A0A0B4J273 112 aa13.06□□□□□ -0.32
PTPRO-202ENST00000348962 CELA3BP08861 270 aa13.06□□□□□ -0.32
PTPRO-202ENST00000348962 TRGC1P0CF51 173 aa13.06□□□□□ -0.32
PTPRO-202ENST00000348962 CD99P14209 185 aa13.06□□□□□ -0.32
PTPRO-202ENST00000348962 RPS11P62280 158 aaKnown RBP eCLIP13.06□□□□□ -0.32
PTPRO-202ENST00000348962 OR13A1Q8NGR1 328 aa13.06□□□□□ -0.32
PTPRO-202ENST00000348962 ANGPTL6Q8NI99 470 aa13.06□□□□□ -0.32
PTPRO-202ENST00000348962 ZNF837Q96EG3 531 aaPredicted RBP13.06□□□□□ -0.32
PTPRO-202ENST00000348962 C5orf66Q9H5L9 145 aa13.06□□□□□ -0.32
PTPRO-202ENST00000348962 OR1N2Q8NGR9 330 aa13.06□□□□□ -0.32
PTPRO-202ENST00000348962 ARPC1AQ92747 370 aa13.06□□□□□ -0.32
PTPRO-202ENST00000348962 CLDND2Q8NHS1 167 aa13.05□□□□□ -0.32
PTPRO-202ENST00000348962 MOB4Q9Y3A3 225 aa13.05□□□□□ -0.32
PTPRO-202ENST00000348962 IGHV3OR16-13A0A075B7E8 117 aa13.05□□□□□ -0.32
PTPRO-202ENST00000348962 IGHV3-74A0A0B4J1X5 117 aa13.05□□□□□ -0.32
PTPRO-202ENST00000348962 C5orf52A6NGY3 159 aa13.05□□□□□ -0.32
PTPRO-202ENST00000348962 WDR25Q64LD2 544 aaPredicted RBP13.05□□□□□ -0.32
PTPRO-202ENST00000348962 ZNF324O75467 553 aaPredicted RBP13.05□□□□□ -0.32
PTPRO-202ENST00000348962 XIRP1Q702N8 1843 aaKnown RBP13.05□□□□□ -0.32
PTPRO-202ENST00000348962 ABCA1O95477 2261 aa13.05□□□□□ -0.32
PTPRO-202ENST00000348962 ROS1P08922 2347 aa13.05□□□□□ -0.32
PTPRO-202ENST00000348962 PLXNA1Q9UIW2 1896 aa13.05□□□□□ -0.32
PTPRO-202ENST00000348962 AP4M1O00189 453 aa13.05□□□□□ -0.32
PTPRO-202ENST00000348962 RNF151Q2KHN1 245 aa13.05□□□□□ -0.32
PTPRO-202ENST00000348962 SAPCD1Q5SSQ6 148 aa13.05□□□□□ -0.32
PTPRO-202ENST00000348962 LINC00114Q6XXX2 140 aa13.05□□□□□ -0.32
PTPRO-202ENST00000348962 FLVCR1-AS1Q8TAF5 88 aa13.05□□□□□ -0.32
PTPRO-202ENST00000348962 PEMTQ9UBM1 199 aa13.05□□□□□ -0.32
PTPRO-202ENST00000348962 IGHV3-48P01763 117 aa13.04□□□□□ -0.32
PTPRO-202ENST00000348962 TM2D1Q9BX74 207 aa13.04□□□□□ -0.32
PTPRO-202ENST00000348962 IGKV3-20P01619 116 aa13.04□□□□□ -0.32
PTPRO-202ENST00000348962 C2orf83Q53S99 150 aa13.04□□□□□ -0.32
PTPRO-202ENST00000348962 VPS25Q9BRG1 176 aa13.04□□□□□ -0.32
PTPRO-202ENST00000348962 POLEQ07864 2286 aa13.04□□□□□ -0.32
PTPRO-202ENST00000348962 ZFC3H1O60293 1989 aaKnown RBP13.04□□□□□ -0.32
PTPRO-202ENST00000348962 OR4A47Q6IF82 309 aa13.04□□□□□ -0.32
PTPRO-202ENST00000348962 CYB561D1Q8N8Q1 229 aa13.04□□□□□ -0.32
PTPRO-202ENST00000348962 LOC389332A0A1B0GUA5 103 aa13.04□□□□□ -0.32
PTPRO-202ENST00000348962 CD74P04233 296 aa13.04□□□□□ -0.32
PTPRO-202ENST00000348962 BTF3P20290 206 aaKnown RBP13.04□□□□□ -0.32
PTPRO-202ENST00000348962 TMEM187Q14656 261 aa13.04□□□□□ -0.32
PTPRO-202ENST00000348962 ZNF502Q8TBZ5 544 aa13.04□□□□□ -0.32
PTPRO-202ENST00000348962 SPSB4Q96A44 273 aa13.04□□□□□ -0.32
PTPRO-202ENST00000348962 CA2P00918 260 aa13.03□□□□□ -0.32
PTPRO-202ENST00000348962 GCGP01275 180 aa13.03□□□□□ -0.32
PTPRO-202ENST00000348962 TMEM177Q53S58 311 aa13.03□□□□□ -0.32
PTPRO-202ENST00000348962 C17orf82Q86X59 251 aaPredicted RBP13.03□□□□□ -0.32
PTPRO-202ENST00000348962 LHFPL5Q8TAF8 219 aa13.03□□□□□ -0.32
PTPRO-202ENST00000348962 SPRR3Q9UBC9 169 aa13.03□□□□□ -0.32
PTPRO-202ENST00000348962 H0YL77 283 aa13.03□□□□□ -0.32
PTPRO-202ENST00000348962 C1QL2Q7Z5L3 287 aa13.03□□□□□ -0.32
PTPRO-202ENST00000348962 WBP1Q96G27 269 aa13.03□□□□□ -0.32
PTPRO-202ENST00000348962 MRPL13Q9BYD1 178 aaKnown RBP13.03□□□□□ -0.32
PTPRO-202ENST00000348962 BRCA1P38398 1863 aaKnown RBP13.03□□□□□ -0.32
PTPRO-202ENST00000348962 HERPUD1Q15011 391 aa13.03□□□□□ -0.32
PTPRO-202ENST00000348962 MYOD1P15172 320 aa13.03□□□□□ -0.32
PTPRO-202ENST00000348962 C11orf91Q3C1V1 193 aa13.03□□□□□ -0.32
PTPRO-202ENST00000348962 SMUG1Q53HV7 270 aa13.03□□□□□ -0.32
PTPRO-202ENST00000348962 ITLN2Q8WWU7 325 aaPredicted RBP13.03□□□□□ -0.32
PTPRO-202ENST00000348962 BET1LQ9NYM9 111 aa13.03□□□□□ -0.32
PTPRO-202ENST00000348962 ELF5Q9UKW6 265 aaPredicted RBP13.03□□□□□ -0.32
PTPRO-202ENST00000348962 MSRB2Q9Y3D2 182 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms