RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 HIST1H2BBP33778 126 aa8.87□□□□□ -0.99
SMG7-201ENST00000347615 HIST1H2BDP58876 126 aa8.87□□□□□ -0.99
SMG7-201ENST00000347615 HIST1H2BCP62807 126 aa8.87□□□□□ -0.99
SMG7-201ENST00000347615 HIST2H2BEQ16778 126 aa8.87□□□□□ -0.99
SMG7-201ENST00000347615 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.87□□□□□ -0.99
SMG7-201ENST00000347615 HIST1H2BHQ93079 126 aa8.87□□□□□ -0.99
SMG7-201ENST00000347615 CYYR1Q96J86 154 aa8.87□□□□□ -0.99
SMG7-201ENST00000347615 HIST1H2BNQ99877 126 aa8.87□□□□□ -0.99
SMG7-201ENST00000347615 HIST1H2BMQ99879 126 aa8.87□□□□□ -0.99
SMG7-201ENST00000347615 TCF19Q9Y242 345 aa8.87□□□□□ -0.99
SMG7-201ENST00000347615 ROS1P08922 2347 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 HEATR5AQ86XA9 2040 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 A6NNC1 897 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 C9JQL5 133 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 MGPP08493 103 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 TMEM183AQ8IXX5 376 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 BMPERQ8N8U9 685 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 TMEM191AQ9H0A3 160 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 CD99P14209 185 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 RPL7P18124 248 aaKnown RBP8.86□□□□□ -0.99
SMG7-201ENST00000347615 CD33P20138 364 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 SMIM17P0DL12 118 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 FAM162BQ5T6X4 162 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 PERPQ96FX8 193 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 RNASE7Q9H1E1 156 aaKnown RBP8.86□□□□□ -0.99
SMG7-201ENST00000347615 MS4A5Q9H3V2 200 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 M0R296 226 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 FGF16O43320 207 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 DMRTA1Q5VZB9 504 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 ZBTB34Q8NCN2 500 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 NPIPB3Q92617 1050 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 PMCHL2Q9BQD1 86 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 SMDT1Q9H4I9 107 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 DNPH1O43598 174 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 NPIPB7O75200 414 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 GCGP01275 180 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 ZNF788Q6ZQV5 615 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 GBGT1Q8N5D6 347 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 OR8B3Q8NGG8 313 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 ZNF714Q96N38 554 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 NABP2Q9BQ15 211 aa8.86□□□□□ -0.99
SMG7-201ENST00000347615 YTHDF2Q9Y5A9 579 aaKnown RBP8.86□□□□□ -0.99
SMG7-201ENST00000347615 IGHV3-66A0A0C4DH42 116 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 C21orf140B9A014 251 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 MGST3O14880 152 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 LILRA1O75019 489 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 HIST1H1EP10412 219 aaKnown RBP8.85□□□□□ -0.99
SMG7-201ENST00000347615 TMEM177Q53S58 311 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 ADTRPQ96IZ2 230 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 LOC390937A0A1W2PQ73 354 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 HOXA5P20719 270 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 ZNF525Q8N782 197 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 ZNF441Q8N8Z8 693 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 TMEM116Q8NCL8 245 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 FGF11Q92914 225 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 SSBP4Q9BWG4 385 aaPredicted RBP8.85□□□□□ -0.99
SMG7-201ENST00000347615 AUP1Q9Y679 476 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 EP300Q09472 2414 aaPredicted RBP8.85□□□□□ -0.99
SMG7-201ENST00000347615 RBFOX2O43251 390 aaKnown RBP eCLIP8.85□□□□□ -0.994e-8■■■■□ 20
SMG7-201ENST00000347615 CA1P00915 261 aaPredicted RBP8.85□□□□□ -0.99
SMG7-201ENST00000347615 IL6RP08887 468 aaPredicted RBP8.85□□□□□ -0.99
SMG7-201ENST00000347615 GCHFRP30047 84 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 UCP3P55916 312 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 LRRC75BQ2VPJ9 315 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 TMEM97Q5BJF2 176 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 COL5A1-AS1Q5SY13 56 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 MIR17HGQ75NE6 70 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 REC114Q7Z4M0 266 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 ISLRO14498 428 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 OR4A8P0C604 315 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 WDR31Q8NA23 367 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 DNASE2BQ8WZ79 361 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 SDF2L1Q9HCN8 221 aa8.85□□□□□ -0.99
SMG7-201ENST00000347615 CNOT1A5YKK6 2376 aaKnown RBP8.85□□□□□ -0.99
SMG7-201ENST00000347615 PPIAL4EA0A075B759 164 aa8.84□□□□□ -0.99
SMG7-201ENST00000347615 PPIAL4DF5H284 164 aa8.84□□□□□ -0.99
SMG7-201ENST00000347615 CA11O75493 328 aa8.84□□□□□ -0.99
SMG7-201ENST00000347615 PPIAL4FP0DN26 164 aa8.84□□□□□ -0.99
SMG7-201ENST00000347615 RPL23P62829 140 aaKnown RBP8.84□□□□□ -0.99
SMG7-201ENST00000347615 EIF4E3Q8N5X7 224 aaKnown RBP8.84□□□□□ -0.99
SMG7-201ENST00000347615 GUCD1Q96NT3 240 aa8.84□□□□□ -0.99
SMG7-201ENST00000347615 P2RX4Q99571 388 aa8.84□□□□□ -0.99
SMG7-201ENST00000347615 HIGD1AQ9Y241 93 aa8.84□□□□□ -0.99
SMG7-201ENST00000347615 PPIAL4AQ9Y536 164 aa8.84□□□□□ -0.99
SMG7-201ENST00000347615 IGHV3-49A0A0A0MS15 119 aa8.84□□□□□ -0.99
SMG7-201ENST00000347615 BTF3P20290 206 aaKnown RBP8.84□□□□□ -0.99
SMG7-201ENST00000347615 PMCHL1Q16048 86 aa8.84□□□□□ -0.99
SMG7-201ENST00000347615 LEMD1Q68G75 181 aa8.84□□□□□ -0.99
SMG7-201ENST00000347615 PRR7Q8TB68 274 aa8.84□□□□□ -0.99
SMG7-201ENST00000347615 GALNT14Q96FL9 552 aa8.84□□□□□ -0.99
SMG7-201ENST00000347615 GDF15Q99988 308 aa8.84□□□□□ -0.99
SMG7-201ENST00000347615 KLK15Q9H2R5 256 aa8.84□□□□□ -0.99
SMG7-201ENST00000347615 UBTD1Q9HAC8 227 aa8.84□□□□□ -0.99
SMG7-201ENST00000347615 GOSR1O95249 250 aa8.84□□□□□ -0.99
SMG7-201ENST00000347615 FCGR2BP31994 310 aaPredicted RBP8.84□□□□□ -0.99
SMG7-201ENST00000347615 TFPI2P48307 235 aa8.84□□□□□ -0.99
SMG7-201ENST00000347615 ERVFRD-1P60508 538 aa8.84□□□□□ -0.99
SMG7-201ENST00000347615 RPL8P62917 257 aaKnown RBP8.84□□□□□ -0.99
SMG7-201ENST00000347615 BPIFA4PQ86YQ2 179 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms