RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 TAAR6Q96RI8 345 aa12.15□□□□□ -0.47
SMTN-202ENST00000347557 AGMATQ9BSE5 352 aa12.15□□□□□ -0.47
SMTN-202ENST00000347557 LPAR2Q9HBW0 351 aa12.15□□□□□ -0.47
SMTN-202ENST00000347557 A6NJY4 79 aa12.14□□□□□ -0.47
SMTN-202ENST00000347557 C15orf62A8K5M9 175 aa12.14□□□□□ -0.47
SMTN-202ENST00000347557 DVL1O14640 695 aa12.14□□□□□ -0.47
SMTN-202ENST00000347557 RAB29O14966 203 aa12.14□□□□□ -0.47
SMTN-202ENST00000347557 CD82P27701 267 aa12.14□□□□□ -0.47
SMTN-202ENST00000347557 GCH1P30793 250 aa12.14□□□□□ -0.47
SMTN-202ENST00000347557 VWA1Q6PCB0 445 aa12.14□□□□□ -0.47
SMTN-202ENST00000347557 WDR82Q6UXN9 313 aa12.14□□□□□ -0.47
SMTN-202ENST00000347557 SGMS2Q8NHU3 365 aa12.14□□□□□ -0.47
SMTN-202ENST00000347557 FER1L6-AS2Q96M78 137 aa12.14□□□□□ -0.47
SMTN-202ENST00000347557 GRIFINA4D1Z8 144 aa12.14□□□□□ -0.47
SMTN-202ENST00000347557 AQP7O14520 342 aa12.14□□□□□ -0.47
SMTN-202ENST00000347557 ARL14EPLP0DKL9 152 aa12.14□□□□□ -0.47
SMTN-202ENST00000347557 IL3RAP26951 378 aa12.14□□□□□ -0.47
SMTN-202ENST00000347557 SLC35E4Q6ICL7 350 aa12.14□□□□□ -0.47
SMTN-202ENST00000347557 TMEM256Q8N2U0 113 aa12.14□□□□□ -0.47
SMTN-202ENST00000347557 NUDT10Q8NFP7 164 aa12.14□□□□□ -0.47
SMTN-202ENST00000347557 ANAPC16Q96DE5 110 aa12.14□□□□□ -0.47
SMTN-202ENST00000347557 SPRY4Q9C004 299 aa12.14□□□□□ -0.47
SMTN-202ENST00000347557 SEPSECSQ9HD40 501 aaKnown RBP12.14□□□□□ -0.47
SMTN-202ENST00000347557 DNAJC4Q9NNZ3 241 aa12.14□□□□□ -0.47
SMTN-202ENST00000347557 IQCF6A8MYZ5 107 aa12.13□□□□□ -0.47
SMTN-202ENST00000347557 TMEM238C9JI98 176 aa12.13□□□□□ -0.47
SMTN-202ENST00000347557 GGCTO75223 188 aaKnown RBP12.13□□□□□ -0.47
SMTN-202ENST00000347557 OR4A8P0C604 315 aa12.13□□□□□ -0.47
SMTN-202ENST00000347557 C11orf53Q8IXP5 236 aa12.13□□□□□ -0.47
SMTN-202ENST00000347557 ZBTB34Q8NCN2 500 aa12.13□□□□□ -0.47
SMTN-202ENST00000347557 MDS2Q8NDY4 140 aa12.13□□□□□ -0.47
SMTN-202ENST00000347557 TMEM170AQ8WVE7 144 aa12.13□□□□□ -0.47
SMTN-202ENST00000347557 TMEM18Q96B42 140 aa12.13□□□□□ -0.47
SMTN-202ENST00000347557 OR6C3Q9NZP0 311 aa12.13□□□□□ -0.47
SMTN-202ENST00000347557 ZNF705FA8MVS1 300 aaPredicted RBP12.13□□□□□ -0.47
SMTN-202ENST00000347557 C21orf140B9A014 251 aa12.13□□□□□ -0.47
SMTN-202ENST00000347557 F6UZH7 168 aa12.13□□□□□ -0.47
SMTN-202ENST00000347557 ACTL6BO94805 426 aa12.13□□□□□ -0.47
SMTN-202ENST00000347557 ZNF705DP0CH99 300 aaPredicted RBP12.13□□□□□ -0.47
SMTN-202ENST00000347557 ZNF705BP0CI00 300 aaPredicted RBP12.13□□□□□ -0.47
SMTN-202ENST00000347557 LINC01551Q86U37 167 aa12.13□□□□□ -0.47
SMTN-202ENST00000347557 CXXC4Q9H2H0 198 aa12.13□□□□□ -0.47
SMTN-202ENST00000347557 MDFIC2A0A1B0GVS7 189 aa12.13□□□□□ -0.47
SMTN-202ENST00000347557 SPINK4O60575 86 aa12.13□□□□□ -0.47
SMTN-202ENST00000347557 CNN1P51911 297 aaKnown RBP12.13□□□□□ -0.47
SMTN-202ENST00000347557 PEAR1Q5VY43 1037 aaPredicted RBP12.13□□□□□ -0.47
SMTN-202ENST00000347557 ZNRF1Q8ND25 227 aa12.13□□□□□ -0.47
SMTN-202ENST00000347557 SCO2A0A1W2PP80 73 aa12.12□□□□□ -0.47
SMTN-202ENST00000347557 ERVFC1-1P60608 527 aa12.12□□□□□ -0.47
SMTN-202ENST00000347557 ERVK-16P61578 105 aa12.12□□□□□ -0.47
SMTN-202ENST00000347557 SRSF6Q13247 344 aaKnown RBP12.12□□□□□ -0.47
SMTN-202ENST00000347557 GABRA6Q16445 453 aa12.12□□□□□ -0.47
SMTN-202ENST00000347557 SMIM21Q3B7S5 101 aa12.12□□□□□ -0.47
SMTN-202ENST00000347557 ACSF3Q4G176 576 aaPredicted RBP12.12□□□□□ -0.47
SMTN-202ENST00000347557 FAM201AQ5SY85 155 aa12.12□□□□□ -0.47
SMTN-202ENST00000347557 GMPPAQ96IJ6 420 aaPredicted RBP12.12□□□□□ -0.47
SMTN-202ENST00000347557 IMMP2LQ96T52 175 aa12.12□□□□□ -0.47
SMTN-202ENST00000347557 TECTAO75443 2155 aa12.12□□□□□ -0.47
SMTN-202ENST00000347557 GVINP1Q7Z2Y8 2422 aa12.12□□□□□ -0.47
SMTN-202ENST00000347557 IRF2P14316 349 aa12.12□□□□□ -0.47
SMTN-202ENST00000347557 KITLGP21583 273 aa12.12□□□□□ -0.47
SMTN-202ENST00000347557 PRDX2P32119 198 aa12.12□□□□□ -0.47
SMTN-202ENST00000347557 RNF151Q2KHN1 245 aa12.12□□□□□ -0.47
SMTN-202ENST00000347557 HES3Q5TGS1 186 aa12.12□□□□□ -0.47
SMTN-202ENST00000347557 TGIF2LYQ8IUE0 185 aa12.12□□□□□ -0.47
SMTN-202ENST00000347557 CD177Q8N6Q3 437 aa12.12□□□□□ -0.47
SMTN-202ENST00000347557 PYGO2Q9BRQ0 406 aa12.12□□□□□ -0.47
SMTN-202ENST00000347557 MS4A5Q9H3V2 200 aa12.12□□□□□ -0.47
SMTN-202ENST00000347557 TNRC6BQ9UPQ9 1833 aaKnown RBP12.11□□□□□ -0.47
SMTN-202ENST00000347557 A0A1W2PN81 502 aa12.11□□□□□ -0.47
SMTN-202ENST00000347557 P0C879 139 aa12.11□□□□□ -0.47
SMTN-202ENST00000347557 OR5I1Q13606 314 aa12.11□□□□□ -0.47
SMTN-202ENST00000347557 SMIM15Q7Z3B0 74 aa12.11□□□□□ -0.47
SMTN-202ENST00000347557 CENPVQ7Z7K6 275 aaPredicted RBP12.11□□□□□ -0.47
SMTN-202ENST00000347557 CLUHP3Q96NS8 147 aa12.11□□□□□ -0.47
SMTN-202ENST00000347557 HSD17B10Q99714 261 aaKnown RBP12.11□□□□□ -0.47
SMTN-202ENST00000347557 COLQQ9Y215 455 aaPredicted RBP12.11□□□□□ -0.47
SMTN-202ENST00000347557 PXMP4Q9Y6I8 212 aa12.11□□□□□ -0.47
SMTN-202ENST00000347557 SLC17A3O00476 420 aa12.11□□□□□ -0.47
SMTN-202ENST00000347557 RBFOX2O43251 390 aaKnown RBP eCLIP12.11□□□□□ -0.47
SMTN-202ENST00000347557 WNT2P09544 360 aa12.11□□□□□ -0.47
SMTN-202ENST00000347557 CECR9P0C854 216 aa12.11□□□□□ -0.47
SMTN-202ENST00000347557 MYOD1P15172 320 aa12.11□□□□□ -0.47
SMTN-202ENST00000347557 UTF1Q5T230 341 aa12.11□□□□□ -0.47
SMTN-202ENST00000347557 LEMD1Q68G75 181 aa12.11□□□□□ -0.47
SMTN-202ENST00000347557 FAM214BQ7L5A3 538 aa12.11□□□□□ -0.47
SMTN-202ENST00000347557 BOD1L1Q8NFC6 3051 aa12.11□□□□□ -0.47
SMTN-202ENST00000347557 PAX5Q02548 391 aa12.11□□□□□ -0.47
SMTN-202ENST00000347557 ACTL10Q5JWF8 245 aa12.11□□□□□ -0.47
SMTN-202ENST00000347557 TMEM178AQ8NBL3 297 aa12.11□□□□□ -0.47
SMTN-202ENST00000347557 DEFB108BQ8NET1 73 aa12.11□□□□□ -0.47
SMTN-202ENST00000347557 CBY3A6NI87 242 aa12.1□□□□□ -0.47
SMTN-202ENST00000347557 NUPR1O60356 82 aa12.1□□□□□ -0.47
SMTN-202ENST00000347557 RPL29P47914 159 aaKnown RBP12.1□□□□□ -0.47
SMTN-202ENST00000347557 SPATA31B1PQ5VZV4 182 aa12.1□□□□□ -0.47
SMTN-202ENST00000347557 RNASEH2CQ8TDP1 164 aaKnown RBP12.1□□□□□ -0.47
SMTN-202ENST00000347557 ZDHHC11Q9H8X9 412 aa12.1□□□□□ -0.47
SMTN-202ENST00000347557 WDR83OSQ9Y284 106 aa12.1□□□□□ -0.47
SMTN-202ENST00000347557 PROP1O75360 226 aa12.1□□□□□ -0.47
SMTN-202ENST00000347557 BMI1P35226 326 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms