RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 PJVKQ0ZLH3 352 aa15.13■□□□□ 0.01
CHMP4A-201ENST00000347519 H2BFWTQ7Z2G1 175 aa15.13■□□□□ 0.01
CHMP4A-201ENST00000347519 RNASE11Q8TAA1 199 aaKnown RBP15.13■□□□□ 0.01
CHMP4A-201ENST00000347519 RBM14Q96PK6 669 aaKnown RBP15.13■□□□□ 0.01
CHMP4A-201ENST00000347519 DUX5Q96PT3 197 aa15.13■□□□□ 0.01
CHMP4A-201ENST00000347519 SLC25A33Q9BSK2 321 aa15.13■□□□□ 0.01
CHMP4A-201ENST00000347519 METTL1Q9UBP6 276 aaKnown RBP15.13■□□□□ 0.01
CHMP4A-201ENST00000347519 TMED3Q9Y3Q3 217 aa15.13■□□□□ 0.01
CHMP4A-201ENST00000347519 NIPBLQ6KC79 2804 aaeCLIP15.13■□□□□ 0.01
CHMP4A-201ENST00000347519 NSD1Q96L73 2696 aaPredicted RBP15.13■□□□□ 0.01
CHMP4A-201ENST00000347519 C13orf42A0A1B0GVH6 325 aa15.12■□□□□ 0.01
CHMP4A-201ENST00000347519 FAM25EA8MYX2 175 aa15.12■□□□□ 0.01
CHMP4A-201ENST00000347519 UPK2O00526 184 aa15.12■□□□□ 0.01
CHMP4A-201ENST00000347519 FCN1O00602 326 aa15.12■□□□□ 0.01
CHMP4A-201ENST00000347519 RRHO14718 337 aa15.12■□□□□ 0.01
CHMP4A-201ENST00000347519 OR2A4O95047 310 aa15.12■□□□□ 0.01
CHMP4A-201ENST00000347519 H2BFSP57053 126 aa15.12■□□□□ 0.01
CHMP4A-201ENST00000347519 FAM219AQ8IW50 185 aa15.12■□□□□ 0.01
CHMP4A-201ENST00000347519 Q8N9W7 124 aa15.12■□□□□ 0.01
CHMP4A-201ENST00000347519 OR5M8Q8NGP6 311 aa15.12■□□□□ 0.01
CHMP4A-201ENST00000347519 RRNAD1Q96FB5 475 aaKnown RBP15.12■□□□□ 0.01
CHMP4A-201ENST00000347519 OR2A7Q96R45 310 aa15.12■□□□□ 0.01
CHMP4A-201ENST00000347519 ESM1Q9NQ30 184 aa15.12■□□□□ 0.01
CHMP4A-201ENST00000347519 BET1LQ9NYM9 111 aa15.12■□□□□ 0.01
CHMP4A-201ENST00000347519 CACNG5Q9UF02 275 aa15.12■□□□□ 0.01
CHMP4A-201ENST00000347519 SIGLEC9Q9Y336 463 aa15.12■□□□□ 0.01
CHMP4A-201ENST00000347519 TNCP24821 2201 aa15.12■□□□□ 0.01
CHMP4A-201ENST00000347519 HMX3A6NHT5 357 aa15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 SH2D7A6NKC9 451 aaPredicted RBP15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 NCBP2LA6PVI3 153 aaKnown RBP15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 KBTBD11O94819 623 aa15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 OR2F2O95006 317 aa15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 SPDEFO95238 335 aa15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 BCAP31P51572 246 aa15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 OR2B8PP59922 312 aa15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 RELBQ01201 579 aa15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 C5orf64Q2M2E5 130 aa15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 VMA21Q3ZAQ7 101 aa15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 FAM71E2Q8N5Q1 922 aa15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 TEX45Q8NA69 505 aa15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 TMEM167AQ8TBQ9 72 aa15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 SSMEM1Q8WWF3 244 aa15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 CLCC1Q96S66 551 aa15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 CUBNO60494 3623 aa15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 CRLF1O75462 422 aa15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 ATG12O94817 140 aa15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 IFNA21P01568 189 aa15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 AMY1AP04745 511 aa15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 SSBP2P81877 361 aaPredicted RBP15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 OR5R1Q8NH85 324 aa15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 RANBP3Q9H6Z4 567 aaPredicted RBP15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 ZNF430Q9H8G1 570 aaPredicted RBP15.11■□□□□ 0.01
CHMP4A-201ENST00000347519 C5orf51A6NDU8 294 aa15.1■□□□□ 0.01
CHMP4A-201ENST00000347519 PITX3O75364 302 aa15.1■□□□□ 0.01
CHMP4A-201ENST00000347519 NXPH3O95157 252 aa15.1■□□□□ 0.01
CHMP4A-201ENST00000347519 PRSS8Q16651 343 aa15.1■□□□□ 0.01
CHMP4A-201ENST00000347519 IAH1Q2TAA2 248 aaPredicted RBP15.1■□□□□ 0.01
CHMP4A-201ENST00000347519 GSG1LQ6UXU4 331 aa15.1■□□□□ 0.01
CHMP4A-201ENST00000347519 C5orf56Q8N8D9 126 aa15.1■□□□□ 0.01
CHMP4A-201ENST00000347519 ZBTB8BQ8NAP8 495 aaPredicted RBP15.1■□□□□ 0.01
CHMP4A-201ENST00000347519 AIFM2Q9BRQ8 373 aa15.1■□□□□ 0.01
CHMP4A-201ENST00000347519 QTRT1Q9BXR0 403 aaKnown RBP15.1■□□□□ 0.01
CHMP4A-201ENST00000347519 CHIAQ9BZP6 476 aa15.1■□□□□ 0.01
CHMP4A-201ENST00000347519 KIAA1456Q9P272 454 aa15.1■□□□□ 0.01
CHMP4A-201ENST00000347519 VPREB3Q9UKI3 123 aa15.1■□□□□ 0.01
CHMP4A-201ENST00000347519 MOB4Q9Y3A3 225 aa15.1■□□□□ 0.01
CHMP4A-201ENST00000347519 A0A1B0GU03 582 aa15.09■□□□□ 0.01
CHMP4A-201ENST00000347519 DNAJC9-AS1A6NH13 148 aa15.09■□□□□ 0.01
CHMP4A-201ENST00000347519 SMCO1Q147U7 214 aa15.09■□□□□ 0.01
CHMP4A-201ENST00000347519 OR8H1Q8NGG4 311 aa15.09■□□□□ 0.01
CHMP4A-201ENST00000347519 C2orf50Q96LR7 162 aa15.09■□□□□ 0.01
CHMP4A-201ENST00000347519 FAM157CP0CG43 387 aa15.08■□□□□ 0
CHMP4A-201ENST00000347519 IL15RAQ13261 267 aa15.08■□□□□ 0
CHMP4A-201ENST00000347519 PLGLAQ15195 96 aa15.08■□□□□ 0
CHMP4A-201ENST00000347519 CXorf66Q5JRM2 361 aaPredicted RBP15.08■□□□□ 0
CHMP4A-201ENST00000347519 C10orf55Q5SWW7 151 aa15.08■□□□□ 0
CHMP4A-201ENST00000347519 C11orf87Q6NUJ2 197 aa15.08■□□□□ 0
CHMP4A-201ENST00000347519 PPP1R27Q86WC6 154 aa15.08■□□□□ 0
CHMP4A-201ENST00000347519 OR4D5Q8NGN0 318 aa15.08■□□□□ 0
CHMP4A-201ENST00000347519 OR4A5Q8NH83 315 aa15.08■□□□□ 0
CHMP4A-201ENST00000347519 VSTM2AQ8TAG5 236 aa15.08■□□□□ 0
CHMP4A-201ENST00000347519 C1RLQ9NZP8 487 aa15.08■□□□□ 0
CHMP4A-201ENST00000347519 GSKIPQ9P0R6 139 aa15.08■□□□□ 0
CHMP4A-201ENST00000347519 PITPNC1Q9UKF7 332 aa15.08■□□□□ 0
CHMP4A-201ENST00000347519 PIGBOS1A0A0B4J2F0 54 aa15.07■□□□□ 0
CHMP4A-201ENST00000347519 BTBD17A6NE02 478 aa15.07■□□□□ 0
CHMP4A-201ENST00000347519 C15orf61A6NNL5 157 aa15.07■□□□□ 0
CHMP4A-201ENST00000347519 E7EUB6 86 aa15.07■□□□□ 0
CHMP4A-201ENST00000347519 ST8SIA3O43173 380 aa15.07■□□□□ 0
CHMP4A-201ENST00000347519 SNAPC5O75971 98 aa15.07■□□□□ 0
CHMP4A-201ENST00000347519 CA2P00918 260 aa15.07■□□□□ 0
CHMP4A-201ENST00000347519 OPN1MWP04001 364 aa15.07■□□□□ 0
CHMP4A-201ENST00000347519 OPN1MW2P0DN77 364 aa15.07■□□□□ 0
CHMP4A-201ENST00000347519 OPN1MW3P0DN78 364 aa15.07■□□□□ 0
CHMP4A-201ENST00000347519 SLC25A6P12236 298 aa15.07■□□□□ 0
CHMP4A-201ENST00000347519 SCGB2A2Q13296 93 aa15.07■□□□□ 0
CHMP4A-201ENST00000347519 RBMS3Q6XE24 437 aaKnown RBP15.07■□□□□ 0
CHMP4A-201ENST00000347519 Q6ZS46 218 aa15.07■□□□□ 0
CHMP4A-201ENST00000347519 FOXRED2Q8IWF2 684 aa15.07■□□□□ 0
CHMP4A-201ENST00000347519 TMEM86BQ8N661 226 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms