RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 J3QR06 171 aa11.52□□□□□ -0.57
CDK5RAP1-202ENST00000346416 IGHV2-70P01814 119 aa11.52□□□□□ -0.57
CDK5RAP1-202ENST00000346416 NPBWR1P48145 328 aa11.52□□□□□ -0.57
CDK5RAP1-202ENST00000346416 OR10X1Q8NGY0 326 aa11.52□□□□□ -0.57
CDK5RAP1-202ENST00000346416 FOXA2Q9Y261 457 aaPredicted RBP11.52□□□□□ -0.57
CDK5RAP1-202ENST00000346416 KPTNQ9Y664 436 aa11.52□□□□□ -0.57
CDK5RAP1-202ENST00000346416 TACC2O95359 2948 aa11.52□□□□□ -0.57
CDK5RAP1-202ENST00000346416 RBFOX3A6NFN3 312 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 SRRM4A7MD48 611 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 FSTL3O95633 263 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 HBE1P02100 147 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 CTRB1P17538 263 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 REG1BP48304 166 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 ELLP55199 621 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 RPP30P78346 268 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 VWC2Q2TAL6 325 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 CTRB2Q6GPI1 263 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 TMEM88Q6PEY1 159 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 CENPVQ7Z7K6 275 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 C11orf42Q8N5U0 333 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 RALYQ9UKM9 306 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 TIMM9Q9Y5J7 89 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 TRBV23-1A0A0A0MS06 115 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 TRAV1-1A0A0B4J248 108 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 RRHO14718 337 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 LY6HO94772 140 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 IGHV1-8P0DP01 117 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 FGF7P21781 194 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 HOXA1P49639 335 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 RAB2AP61019 212 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 HSPE1P61604 102 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 ZNF726P1Q15940 193 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 AVPI1Q5T686 147 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 ZNF841Q6ZN19 808 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 ABHD12Q8N2K0 398 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 LINC00311Q8N616 119 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 C8orf31Q8N9H6 132 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 ZNF596Q8TC21 504 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 RAB1BQ9H0U4 201 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 SLC35B3Q9H1N7 401 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 CBLN4Q9NTU7 201 aa11.51□□□□□ -0.57
CDK5RAP1-202ENST00000346416 A0A087X0M5 115 aa11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 A0A1B0GX30 115 aa11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 H7C2Y5 167 aa11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 SCAF4O95104 1147 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 IL6RP08887 468 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 UQCRFS1P47985 274 aa11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 DIAPH2-AS1Q14236 149 aa11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 HAGHQ16775 308 aa11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 TMEM41BQ5BJD5 291 aa11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 RCC1LQ96I51 464 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 H0YJW9 148 aa11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 APOA2P02652 100 aa11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 SOD3P08294 240 aa11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 MYOD1P15172 320 aa11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 ETV3LQ6ZN32 361 aa11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 SSX7Q7RTT5 188 aa11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 CBLN2Q8IUK8 224 aa11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 OR5AN1Q8NGI8 311 aa11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 OR9G1Q8NH87 305 aa11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 TMEM186Q96B77 213 aa11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 AIFM2Q9BRQ8 373 aa11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 NPCDR1Q9BY65 106 aa11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 SMDT1Q9H4I9 107 aa11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 OR51B2Q9Y5P1 312 aa11.5□□□□□ -0.57
CDK5RAP1-202ENST00000346416 MDKP21741 143 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP1-202ENST00000346416 CD1BP29016 333 aa11.49□□□□□ -0.57
CDK5RAP1-202ENST00000346416 FLI1Q01543 452 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP1-202ENST00000346416 C11orf71Q6IPW1 123 aa11.49□□□□□ -0.57
CDK5RAP1-202ENST00000346416 ACSM6Q6P461 480 aa11.49□□□□□ -0.57
CDK5RAP1-202ENST00000346416 LCN15Q6UWW0 184 aa11.49□□□□□ -0.57
CDK5RAP1-202ENST00000346416 OSR1Q8TAX0 266 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP1-202ENST00000346416 TMEM170AQ8WVE7 144 aa11.49□□□□□ -0.57
CDK5RAP1-202ENST00000346416 MBD3L1Q8WWY6 194 aa11.49□□□□□ -0.57
CDK5RAP1-202ENST00000346416 ST6GALNAC6Q969X2 333 aa11.49□□□□□ -0.57
CDK5RAP1-202ENST00000346416 PRNDQ9UKY0 176 aa11.49□□□□□ -0.57
CDK5RAP1-202ENST00000346416 UPK2O00526 184 aa11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 IGKV1D-33P01593 117 aa11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 IGKV1-33P01594 117 aa11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 SAA1P0DJI8 122 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 OR13C7P0DN81 318 aa11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 FAM71F2Q6NXP2 309 aa11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 RPP25LQ8N5L8 163 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 CLDND2Q8NHS1 167 aa11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 HARBI1Q96MB7 349 aa11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 HINT2Q9BX68 163 aa11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 TMEM133Q9H2Q1 129 aa11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 CFAP46Q8IYW2 2715 aa11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 PRSS46E5RG02 174 aa11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 GNLYP22749 145 aa11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 ZNF137PP52743 207 aa11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 FGF8P55075 233 aaPredicted RBP11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 C4orf17Q53FE4 359 aa11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 ZNF787Q6DD87 383 aa11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 ZNF709Q8N972 641 aa11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 NABP2Q9BQ15 211 aa11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 ENY2Q9NPA8 101 aa11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 BET1LQ9NYM9 111 aa11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 ZNF257Q9Y2Q1 563 aa11.48□□□□□ -0.57
CDK5RAP1-202ENST00000346416 ACACBO00763 2458 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms