RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 OR13D1Q8NGV5 346 aa11.05□□□□□ -0.64
CASC4-202ENST00000345795 CA11O75493 328 aa11.05□□□□□ -0.64
CASC4-202ENST00000345795 B2MP61769 119 aa11.05□□□□□ -0.64
CASC4-202ENST00000345795 OR4S2Q8NH73 311 aa11.05□□□□□ -0.64
CASC4-202ENST00000345795 ATPIF1Q9UII2 106 aa11.05□□□□□ -0.64
CASC4-202ENST00000345795 UHRF2Q96PU4 802 aa11.05□□□□□ -0.64
CASC4-202ENST00000345795 CHD3Q12873 2000 aaKnown RBP11.05□□□□□ -0.64
CASC4-202ENST00000345795 IGKV3-7A0A075B6H7 116 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 FAM90A10PA6NDY2 464 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 FAM90A18PA6NE21 464 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 FAM90A16PA6NEW6 464 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 FAM90A20PA6NIJ5 464 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 FAM90A8PA6NJQ4 464 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 FAM90A7PA6NKC0 464 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 FAM90A22PA8MWA6 464 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 FAM90A12PA8MX19 464 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 FAM90A5PA8MXJ8 464 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 FAM90A23PA8MXZ1 464 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 C11orf94C9JXX5 98 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 NDUFB4O95168 129 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 GAPDHP04406 335 aaKnown RBP11.04□□□□□ -0.64
CASC4-202ENST00000345795 FAM90A15PP0C7V4 464 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 FAM90A13PP0C7W8 464 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 FAM90A14PP0C7W9 464 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 FAM90A24PP0C7X0 464 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 NPY1RP25929 384 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 LGALS4P56470 323 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 GNB2P62879 340 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 ID3Q02535 119 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 TMEM56Q96MV1 263 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 TMEM56-RWDD3S4R434 201 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 IGHV3OR16-13A0A075B7E8 117 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 IGHV3-74A0A0B4J1X5 117 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 IGHG3P01860 377 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 RBP4P02753 201 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 MORN2Q502X0 79 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 Q6ZS92 163 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 TGIF2LXQ8IUE1 241 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 MUC15Q8N387 334 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 RPEQ96AT9 228 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 TCF19Q9Y242 345 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 OR51B2Q9Y5P1 312 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 LOC105371267A0A1B0GV96 52 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 C1QTNF9BB2RNN3 333 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 MPZP25189 248 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 ZNF146Q15072 292 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 PSG5Q15238 335 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 ASCL4Q6XD76 172 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 LFNGQ8NES3 379 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 TMEM147Q9BVK8 224 aa11.04□□□□□ -0.64
CASC4-202ENST00000345795 MRPL20Q9BYC9 149 aaKnown RBP11.04□□□□□ -0.64
CASC4-202ENST00000345795 PRSS44E7EML9 344 aa11.03□□□□□ -0.64
CASC4-202ENST00000345795 RAB29O14966 203 aa11.03□□□□□ -0.64
CASC4-202ENST00000345795 MOSP00540 346 aa11.03□□□□□ -0.64
CASC4-202ENST00000345795 RAB13P51153 203 aa11.03□□□□□ -0.64
CASC4-202ENST00000345795 SSX2Q16385 188 aa11.03□□□□□ -0.64
CASC4-202ENST00000345795 TBR1Q16650 682 aa11.03□□□□□ -0.64
CASC4-202ENST00000345795 ZNF714Q96N38 554 aa11.03□□□□□ -0.64
CASC4-202ENST00000345795 BARX1Q9HBU1 254 aaPredicted RBP11.03□□□□□ -0.64
CASC4-202ENST00000345795 SSUH2Q9Y2M2 353 aa11.03□□□□□ -0.64
CASC4-202ENST00000345795 A1L4Q6 167 aa11.03□□□□□ -0.64
CASC4-202ENST00000345795 IGHV3-23P01764 117 aa11.03□□□□□ -0.64
CASC4-202ENST00000345795 TRGC2P03986 189 aa11.03□□□□□ -0.64
CASC4-202ENST00000345795 SMIM8Q96KF7 97 aa11.03□□□□□ -0.64
CASC4-202ENST00000345795 K7N7A8 449 aa11.03□□□□□ -0.64
CASC4-202ENST00000345795 RAB5CP51148 216 aa11.03□□□□□ -0.64
CASC4-202ENST00000345795 H0Y8G0 127 aa11.02□□□□□ -0.64
CASC4-202ENST00000345795 ADH4P08319 380 aa11.02□□□□□ -0.64
CASC4-202ENST00000345795 RPP30P78346 268 aaKnown RBP11.02□□□□□ -0.64
CASC4-202ENST00000345795 ACOT6Q3I5F7 207 aaPredicted RBP11.02□□□□□ -0.64
CASC4-202ENST00000345795 KRTCAP3Q53RY4 240 aa11.02□□□□□ -0.64
CASC4-202ENST00000345795 CT45A1Q5HYN5 189 aa11.02□□□□□ -0.64
CASC4-202ENST00000345795 SLC35E4Q6ICL7 350 aa11.02□□□□□ -0.64
CASC4-202ENST00000345795 CT45A3Q8NHU0 189 aa11.02□□□□□ -0.64
CASC4-202ENST00000345795 GSX1Q9H4S2 264 aaPredicted RBP11.02□□□□□ -0.64
CASC4-202ENST00000345795 PLSCR2Q9NRY7 297 aa11.02□□□□□ -0.64
CASC4-202ENST00000345795 ZNF320A2RRD8 509 aa11.02□□□□□ -0.65
CASC4-202ENST00000345795 FABP4P15090 132 aa11.02□□□□□ -0.65
CASC4-202ENST00000345795 OR10J1P30954 320 aa11.02□□□□□ -0.65
CASC4-202ENST00000345795 ATP5G3P48201 142 aa11.02□□□□□ -0.65
CASC4-202ENST00000345795 RNF212Q495C1 297 aa11.02□□□□□ -0.65
CASC4-202ENST00000345795 C11orf53Q8IXP5 236 aa11.02□□□□□ -0.65
CASC4-202ENST00000345795 ZNF525Q8N782 197 aa11.02□□□□□ -0.65
CASC4-202ENST00000345795 FLYWCH2Q96CP2 140 aaKnown RBP11.02□□□□□ -0.65
CASC4-202ENST00000345795 CIB3Q96Q77 187 aaPredicted RBP11.02□□□□□ -0.65
CASC4-202ENST00000345795 SFXN3Q9BWM7 321 aa11.02□□□□□ -0.65
CASC4-202ENST00000345795 INSIG2Q9Y5U4 225 aa11.02□□□□□ -0.65
CASC4-202ENST00000345795 PXMP4Q9Y6I8 212 aa11.02□□□□□ -0.65
CASC4-202ENST00000345795 SVEP1Q4LDE5 3571 aa11.02□□□□□ -0.65
CASC4-202ENST00000345795 ARPC4-TTLL3A0A0A6YYG9 625 aa11.02□□□□□ -0.65
CASC4-202ENST00000345795 NDUFS7O75251 213 aa11.02□□□□□ -0.65
CASC4-202ENST00000345795 LEMD1Q68G75 181 aa11.02□□□□□ -0.65
CASC4-202ENST00000345795 OR4A47Q6IF82 309 aa11.02□□□□□ -0.65
CASC4-202ENST00000345795 OR1B1Q8NGR6 318 aa11.02□□□□□ -0.65
CASC4-202ENST00000345795 C17orf100A8MU93 164 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 SRRM5B3KS81 715 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 CA2P00918 260 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 HRASP01112 189 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 LINC00596Q86U02 117 aa11.01□□□□□ -0.65
CASC4-202ENST00000345795 SLC24A4Q8NFF2 622 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms