RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 TMEM56-RWDD3S4R434 201 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 ALPK2Q86TB3 2170 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 PSG1P11464 419 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 C3AR1Q16581 482 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 SSBP4Q9BWG4 385 aaPredicted RBP10.31□□□□□ -0.76
COL12A1-202ENST00000345356 OTOFQ9HC10 1997 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 LGALS3P17931 250 aaKnown RBP10.31□□□□□ -0.76
COL12A1-202ENST00000345356 FOXL2P58012 376 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 ACTL10Q5JWF8 245 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 VCX2Q9H322 139 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 ODAMA1E959 279 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 COX5BP10606 129 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 VEGFBP49765 207 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 SEC11AP67812 179 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 SPINK14Q6IE38 97 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 MBD3L1Q8WWY6 194 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 VSIRQ9H7M9 311 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 CD33P20138 364 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 TIMM23BQ5SRD1 257 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 MDP1Q86V88 176 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 GNB1LQ9BYB4 327 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 GTSF1LQ9H1H1 148 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 ST20Q9HBF5 79 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 TGFAP01135 160 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 TEX38Q6PEX7 206 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 TMEM92Q6UXU6 159 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 SAXO1Q8IYX7 474 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 LRTM2Q8N967 370 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 NAA38Q9BRA0 125 aaKnown RBP10.3□□□□□ -0.76
COL12A1-202ENST00000345356 COL4A1P02462 1669 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 IL11RAQ14626 422 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 HCP5Q6MZN7 132 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 OR4X2Q8NGF9 303 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 PRELID3AQ96N28 172 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 RPP25Q9BUL9 199 aaKnown RBP10.3□□□□□ -0.76
COL12A1-202ENST00000345356 COL18A1P39060 1754 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 C17orf51A8MQB3 221 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 GOLT1AQ6ZVE7 132 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 ZPBPQ9BS86 351 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 COL24A1Q17RW2 1714 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 HIGD1CA8MV81 97 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 PRRG2O14669 202 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 AGFG2O95081 481 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 RSPO4Q2I0M5 234 aaPredicted RBP10.3□□□□□ -0.76
COL12A1-202ENST00000345356 KHDC1LQ5JSQ8 128 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 TMEM240Q5SV17 173 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 C1orf174Q8IYL3 243 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 TCFL5Q9UL49 500 aa10.3□□□□□ -0.76
COL12A1-202ENST00000345356 C9JQL5 133 aa10.29□□□□□ -0.76
COL12A1-202ENST00000345356 SMIM10L1P0DMW3 83 aa10.29□□□□□ -0.76
COL12A1-202ENST00000345356 MEF2CQ06413 473 aaPredicted RBP10.29□□□□□ -0.76
COL12A1-202ENST00000345356 WFDC3Q8IUB2 231 aa10.29□□□□□ -0.76
COL12A1-202ENST00000345356 OCC1Q8TAD7 63 aa10.29□□□□□ -0.76
COL12A1-202ENST00000345356 SMIM10Q96HG1 83 aa10.29□□□□□ -0.76
COL12A1-202ENST00000345356 ZNF714Q96N38 554 aa10.29□□□□□ -0.76
COL12A1-202ENST00000345356 LAMB2P55268 1798 aa10.29□□□□□ -0.76
COL12A1-202ENST00000345356 RPL8P62917 257 aaKnown RBP10.29□□□□□ -0.76
COL12A1-202ENST00000345356 RNF7Q9UBF6 113 aa10.29□□□□□ -0.76
COL12A1-202ENST00000345356 PROB1E7EW31 1015 aa10.29□□□□□ -0.76
COL12A1-202ENST00000345356 M0QZ24 198 aa10.29□□□□□ -0.76
COL12A1-202ENST00000345356 RPS20P60866 119 aaKnown RBP10.29□□□□□ -0.76
COL12A1-202ENST00000345356 LHX8Q68G74 356 aa10.29□□□□□ -0.76
COL12A1-202ENST00000345356 TMEM108Q6UXF1 575 aa10.29□□□□□ -0.76
COL12A1-202ENST00000345356 PAQR4Q8N4S7 273 aaPredicted RBP10.29□□□□□ -0.76
COL12A1-202ENST00000345356 IGKV1D-43A0A0B4J1Z2 117 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 MGST3O14880 152 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 ESDP10768 282 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 MS4A5Q9H3V2 200 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 INSIG2Q9Y5U4 225 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 TRAV8-2A0A0B4J237 113 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 PEX7O00628 323 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 SUPT4H1P63272 117 aaKnown RBP10.28□□□□□ -0.76
COL12A1-202ENST00000345356 MPV17L2Q567V2 206 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 EAF1Q96JC9 268 aaPredicted RBP10.28□□□□□ -0.76
COL12A1-202ENST00000345356 WBP1LQ9NX94 342 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 POLR3KQ9Y2Y1 108 aaPredicted RBP10.28□□□□□ -0.76
COL12A1-202ENST00000345356 LINC01565O15544 149 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 APOMO95445 188 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 ANOS1P23352 680 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 MST1LQ2TV78 715 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 C9orf50Q5SZB4 431 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 SAMD5Q5TGI4 173 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 RBPMS2Q6ZRY4 209 aaKnown RBP10.28□□□□□ -0.76
COL12A1-202ENST00000345356 PKIBQ9C010 78 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 RPP21Q9H633 154 aaKnown RBP10.28□□□□□ -0.76
COL12A1-202ENST00000345356 PIKFYVEQ9Y2I7 2098 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 DOCK1Q14185 1865 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 GAGE12BA1L429 117 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 PCSK4Q6UW60 755 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 LINC00114Q6XXX2 140 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 ZNF826PQ6ZT77 177 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 FOXC2Q99958 501 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 IGFBP2P18065 325 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 RPL27AP46776 148 aaKnown RBP10.28□□□□□ -0.76
COL12A1-202ENST00000345356 RFNGQ9Y644 331 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 COX11Q9Y6N1 276 aa10.28□□□□□ -0.76
COL12A1-202ENST00000345356 IGHV2-5P01817 119 aa10.27□□□□□ -0.76
COL12A1-202ENST00000345356 TSPOP30536 169 aa10.27□□□□□ -0.76
COL12A1-202ENST00000345356 LINC00470Q9BZP3 86 aa10.27□□□□□ -0.76
COL12A1-202ENST00000345356 MARF1Q9Y4F3 1742 aaKnown RBP10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms