RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 ARPC1BO15143 372 aaKnown RBP16.35■□□□□ 0.21
SMARCB1-202ENST00000344921 KBTBD11O94819 623 aa16.35■□□□□ 0.21
SMARCB1-202ENST00000344921 COMMD1Q8N668 190 aa16.35■□□□□ 0.21
SMARCB1-202ENST00000344921 SGMS2Q8NHU3 365 aa16.35■□□□□ 0.21
SMARCB1-202ENST00000344921 COMMD9Q9P000 198 aa16.35■□□□□ 0.21
SMARCB1-202ENST00000344921 ZNF580Q9UK33 172 aa16.35■□□□□ 0.21
SMARCB1-202ENST00000344921 GPR132Q9UNW8 380 aa16.35■□□□□ 0.21
SMARCB1-202ENST00000344921 M0QZ24 198 aa16.34■□□□□ 0.21
SMARCB1-202ENST00000344921 KRASP01116 189 aa16.34■□□□□ 0.21
SMARCB1-202ENST00000344921 OPN1MWP04001 364 aa16.34■□□□□ 0.21
SMARCB1-202ENST00000344921 SERPINE2P07093 398 aa16.34■□□□□ 0.21
SMARCB1-202ENST00000344921 OPN1MW2P0DN77 364 aa16.34■□□□□ 0.21
SMARCB1-202ENST00000344921 OPN1MW3P0DN78 364 aa16.34■□□□□ 0.21
SMARCB1-202ENST00000344921 IL7P13232 177 aa16.34■□□□□ 0.21
SMARCB1-202ENST00000344921 CD83Q01151 205 aa16.34■□□□□ 0.21
SMARCB1-202ENST00000344921 ZNF585BQ52M93 769 aa16.34■□□□□ 0.21
SMARCB1-202ENST00000344921 OR4A47Q6IF82 309 aa16.34■□□□□ 0.21
SMARCB1-202ENST00000344921 UNQ5815/PRO19632Q6UWF5 114 aa16.34■□□□□ 0.21
SMARCB1-202ENST00000344921 PUSL1Q8N0Z8 303 aaKnown RBP16.34■□□□□ 0.21
SMARCB1-202ENST00000344921 LFNGQ8NES3 379 aa16.34■□□□□ 0.21
SMARCB1-202ENST00000344921 PHB2Q99623 299 aa16.34■□□□□ 0.21
SMARCB1-202ENST00000344921 TEX13DA0A0J9YY54 714 aaPredicted RBP16.33■□□□□ 0.21
SMARCB1-202ENST00000344921 C3orf85A0A1B0GTC6 90 aa16.33■□□□□ 0.21
SMARCB1-202ENST00000344921 A0A1W2PN81 502 aa16.33■□□□□ 0.21
SMARCB1-202ENST00000344921 A0A1W2PRX2 142 aa16.33■□□□□ 0.21
SMARCB1-202ENST00000344921 CHRNA7P36544 502 aa16.33■□□□□ 0.21
SMARCB1-202ENST00000344921 TCTEX1D4Q5JR98 221 aa16.33■□□□□ 0.21
SMARCB1-202ENST00000344921 RTBDNQ9BSG5 229 aaPredicted RBP16.33■□□□□ 0.21
SMARCB1-202ENST00000344921 C5orf66Q9H5L9 145 aa16.33■□□□□ 0.21
SMARCB1-202ENST00000344921 FAM212BQ9NTI7 297 aaPredicted RBP16.33■□□□□ 0.21
SMARCB1-202ENST00000344921 MARCH11A6NNE9 402 aa16.33■□□□□ 0.2
SMARCB1-202ENST00000344921 EGR2P11161 476 aaPredicted RBP16.33■□□□□ 0.2
SMARCB1-202ENST00000344921 MRGPRG-AS1Q2M3A8 158 aa16.33■□□□□ 0.2
SMARCB1-202ENST00000344921 C2orf68Q2NKX9 166 aa16.33■□□□□ 0.2
SMARCB1-202ENST00000344921 TMEM167AQ8TBQ9 72 aa16.33■□□□□ 0.2
SMARCB1-202ENST00000344921 TMEM140Q9NV12 185 aa16.33■□□□□ 0.2
SMARCB1-202ENST00000344921 BET1LQ9NYM9 111 aa16.33■□□□□ 0.2
SMARCB1-202ENST00000344921 TSSC4Q9Y5U2 329 aaPredicted RBP16.33■□□□□ 0.2
SMARCB1-202ENST00000344921 NUBP2Q9Y5Y2 271 aa16.33■□□□□ 0.2
SMARCB1-202ENST00000344921 CENPXA8MT69 81 aa16.32■□□□□ 0.2
SMARCB1-202ENST00000344921 H0Y980 276 aa16.32■□□□□ 0.2
SMARCB1-202ENST00000344921 G6PCP35575 357 aa16.32■□□□□ 0.2
SMARCB1-202ENST00000344921 SSBP2P81877 361 aaPredicted RBP16.32■□□□□ 0.2
SMARCB1-202ENST00000344921 CFHR3Q02985 330 aa16.32■□□□□ 0.2
SMARCB1-202ENST00000344921 AKIRIN2Q53H80 203 aa16.32■□□□□ 0.2
SMARCB1-202ENST00000344921 CXorf66Q5JRM2 361 aaPredicted RBP16.32■□□□□ 0.2
SMARCB1-202ENST00000344921 TMEM65Q6PI78 240 aa16.32■□□□□ 0.2
SMARCB1-202ENST00000344921 NDUFA11Q86Y39 141 aa16.32■□□□□ 0.2
SMARCB1-202ENST00000344921 OR4A5Q8NH83 315 aa16.32■□□□□ 0.2
SMARCB1-202ENST00000344921 SRSF12Q8WXF0 261 aaKnown RBP16.32■□□□□ 0.2
SMARCB1-202ENST00000344921 TP53RKQ96S44 253 aa16.32■□□□□ 0.2
SMARCB1-202ENST00000344921 MSGN1A6NI15 193 aa16.31■□□□□ 0.2
SMARCB1-202ENST00000344921 IGHG4P01861 327 aa16.31■□□□□ 0.2
SMARCB1-202ENST00000344921 APELAP0DMC3 54 aa16.31■□□□□ 0.2
SMARCB1-202ENST00000344921 PPIFP30405 207 aaKnown RBP16.31■□□□□ 0.2
SMARCB1-202ENST00000344921 CRIP2P52943 208 aaPredicted RBP16.31■□□□□ 0.2
SMARCB1-202ENST00000344921 RPL8P62917 257 aaKnown RBP16.31■□□□□ 0.2
SMARCB1-202ENST00000344921 POU2AF1Q16633 256 aa16.31■□□□□ 0.2
SMARCB1-202ENST00000344921 SP6Q3SY56 376 aa16.31■□□□□ 0.2
SMARCB1-202ENST00000344921 LCNL1Q6ZST4 164 aa16.31■□□□□ 0.2
SMARCB1-202ENST00000344921 VSIG4Q9Y279 399 aa16.31■□□□□ 0.2
SMARCB1-202ENST00000344921 NAP1L6A6NFF2 107 aa16.31■□□□□ 0.2
SMARCB1-202ENST00000344921 HNRNPCP07910 306 aaKnown RBP eCLIP16.31■□□□□ 0.21e-6■□□□□ 9.1
SMARCB1-202ENST00000344921 ELANEP08246 267 aa16.31■□□□□ 0.2
SMARCB1-202ENST00000344921 PF4V1P10720 104 aa16.31■□□□□ 0.2
SMARCB1-202ENST00000344921 CD40LGP29965 261 aa16.31■□□□□ 0.2
SMARCB1-202ENST00000344921 FOXE3Q13461 319 aa16.31■□□□□ 0.2
SMARCB1-202ENST00000344921 TRIM16LQ309B1 348 aa16.31■□□□□ 0.2
SMARCB1-202ENST00000344921 FOXA2Q9Y261 457 aaPredicted RBP16.31■□□□□ 0.2
SMARCB1-202ENST00000344921 AKR1C4P17516 323 aa16.3■□□□□ 0.2
SMARCB1-202ENST00000344921 MAS1LP35410 378 aa16.3■□□□□ 0.2
SMARCB1-202ENST00000344921 C10orf55Q5SWW7 151 aa16.3■□□□□ 0.2
SMARCB1-202ENST00000344921 SGPP2Q8IWX5 399 aa16.3■□□□□ 0.2
SMARCB1-202ENST00000344921 MINDY2Q8NBR6 621 aa16.3■□□□□ 0.2
SMARCB1-202ENST00000344921 ADAD2Q8NCV1 583 aaKnown RBP16.3■□□□□ 0.2
SMARCB1-202ENST00000344921 SLC25A21Q9BQT8 299 aaPredicted RBP16.3■□□□□ 0.2
SMARCB1-202ENST00000344921 CCDC32Q9BV29 185 aa16.3■□□□□ 0.2
SMARCB1-202ENST00000344921 NAA60Q9H7X0 242 aa16.3■□□□□ 0.2
SMARCB1-202ENST00000344921 UPK2O00526 184 aa16.29■□□□□ 0.2
SMARCB1-202ENST00000344921 RPLP1P05386 114 aaKnown RBP16.29■□□□□ 0.2
SMARCB1-202ENST00000344921 TMED4Q7Z7H5 227 aa16.29■□□□□ 0.2
SMARCB1-202ENST00000344921 SPIN2AQ99865 258 aa16.29■□□□□ 0.2
SMARCB1-202ENST00000344921 SPIN2BQ9BPZ2 258 aa16.29■□□□□ 0.2
SMARCB1-202ENST00000344921 WDR12Q9GZL7 423 aaKnown RBP16.29■□□□□ 0.2
SMARCB1-202ENST00000344921 ZNF355PQ9NSJ1 428 aa16.29■□□□□ 0.2
SMARCB1-202ENST00000344921 KCNIP3Q9Y2W7 256 aa16.29■□□□□ 0.2
SMARCB1-202ENST00000344921 TNCP24821 2201 aa16.29■□□□□ 0.2
SMARCB1-202ENST00000344921 TRAV3A0A0B4J244 114 aa16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 CRYM-AS1A6NIL9 109 aa16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 B3GALNT1O75752 331 aa16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 OR5AC1P0C628 307 aa16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 HLA-GP17693 338 aa16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 PSMB8P28062 276 aa16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 RPL27AP46776 148 aaKnown RBP16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 CCR6P51684 374 aa16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 ZNF846Q147U1 533 aa16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 H2BFWTQ7Z2G1 175 aa16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 OR5T1Q8NG75 326 aa16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 OR5M8Q8NGP6 311 aa16.28■□□□□ 0.2
SMARCB1-202ENST00000344921 CASTOR1Q8WTX7 329 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms