RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 SSX9Q7RTT3 188 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 ZNF429Q86V71 674 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 LYSMD2Q8IV50 215 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 ZBTB34Q8NCN2 500 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 TMEM167AQ8TBQ9 72 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 OR2A7Q96R45 310 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 ZMAT5Q9UDW3 170 aaKnown RBP11.07□□□□□ -0.64
HMGN3-202ENST00000344726 A0A0G2JLM5 398 aa11.06□□□□□ -0.64
HMGN3-202ENST00000344726 HMX3A6NHT5 357 aa11.06□□□□□ -0.64
HMGN3-202ENST00000344726 HPGDSO60760 199 aa11.06□□□□□ -0.64
HMGN3-202ENST00000344726 ACTL6BO94805 426 aa11.06□□□□□ -0.64
HMGN3-202ENST00000344726 IL6RP08887 468 aaPredicted RBP11.06□□□□□ -0.64
HMGN3-202ENST00000344726 MYOD1P15172 320 aa11.06□□□□□ -0.64
HMGN3-202ENST00000344726 GNRHRP30968 328 aa11.06□□□□□ -0.64
HMGN3-202ENST00000344726 KIR2DS2P43631 304 aa11.06□□□□□ -0.64
HMGN3-202ENST00000344726 ZNF343Q6P1L6 599 aa11.06□□□□□ -0.64
HMGN3-202ENST00000344726 C19orf35Q6ZS72 473 aa11.06□□□□□ -0.64
HMGN3-202ENST00000344726 SPAG16Q8N0X2 631 aa11.06□□□□□ -0.64
HMGN3-202ENST00000344726 GPX8Q8TED1 209 aa11.06□□□□□ -0.64
HMGN3-202ENST00000344726 ZNF2Q9BSG1 426 aaPredicted RBP11.06□□□□□ -0.64
HMGN3-202ENST00000344726 FXYD6Q9H0Q3 95 aa11.06□□□□□ -0.64
HMGN3-202ENST00000344726 RANGRFQ9HD47 186 aaPredicted RBP11.06□□□□□ -0.64
HMGN3-202ENST00000344726 ADAM30Q9UKF2 790 aa11.06□□□□□ -0.64
HMGN3-202ENST00000344726 ZNF256Q9Y2P7 627 aaPredicted RBP11.06□□□□□ -0.64
HMGN3-202ENST00000344726 TENM3Q9P273 2699 aa11.05□□□□□ -0.64
HMGN3-202ENST00000344726 TRBV9A0A0B4J1U6 114 aa11.05□□□□□ -0.64
HMGN3-202ENST00000344726 MPPED1O15442 326 aa11.05□□□□□ -0.64
HMGN3-202ENST00000344726 CREBL2O60519 120 aaPredicted RBP11.05□□□□□ -0.64
HMGN3-202ENST00000344726 HLA-DMAP28067 261 aa11.05□□□□□ -0.64
HMGN3-202ENST00000344726 RORCP51449 518 aa11.05□□□□□ -0.64
HMGN3-202ENST00000344726 HERV-K104P61576 105 aa11.05□□□□□ -0.64
HMGN3-202ENST00000344726 GPR107Q5VW38 600 aa11.05□□□□□ -0.64
HMGN3-202ENST00000344726 OR4A47Q6IF82 309 aa11.05□□□□□ -0.64
HMGN3-202ENST00000344726 HAPLN4Q86UW8 402 aa11.05□□□□□ -0.64
HMGN3-202ENST00000344726 TTC9CQ8N5M4 171 aa11.05□□□□□ -0.64
HMGN3-202ENST00000344726 OR5H2Q8NGV7 314 aa11.05□□□□□ -0.64
HMGN3-202ENST00000344726 OR51H1Q8NH63 302 aa11.05□□□□□ -0.64
HMGN3-202ENST00000344726 VSTM2AQ8TAG5 236 aa11.05□□□□□ -0.64
HMGN3-202ENST00000344726 MOB3AQ96BX8 217 aa11.05□□□□□ -0.64
HMGN3-202ENST00000344726 CMTM3Q96MX0 182 aa11.05□□□□□ -0.64
HMGN3-202ENST00000344726 SPIN2AQ99865 258 aa11.05□□□□□ -0.64
HMGN3-202ENST00000344726 SPIN2BQ9BPZ2 258 aa11.05□□□□□ -0.64
HMGN3-202ENST00000344726 ZFAND3Q9H8U3 227 aa11.05□□□□□ -0.64
HMGN3-202ENST00000344726 AKIP1Q9NQ31 210 aa11.05□□□□□ -0.64
HMGN3-202ENST00000344726 TRAV3A0A0B4J244 114 aa11.04□□□□□ -0.64
HMGN3-202ENST00000344726 CGB1A6NKQ9 187 aa11.04□□□□□ -0.64
HMGN3-202ENST00000344726 RBFOX2O43251 390 aaKnown RBP eCLIP11.04□□□□□ -0.64
HMGN3-202ENST00000344726 HRASP01112 189 aa11.04□□□□□ -0.64
HMGN3-202ENST00000344726 ZNF735P0CB33 412 aa11.04□□□□□ -0.64
HMGN3-202ENST00000344726 SPNP16150 400 aa11.04□□□□□ -0.64
HMGN3-202ENST00000344726 HRH1P35367 487 aa11.04□□□□□ -0.64
HMGN3-202ENST00000344726 RPL27AP46776 148 aaKnown RBP11.04□□□□□ -0.64
HMGN3-202ENST00000344726 ALDH3B2P48448 385 aa11.04□□□□□ -0.64
HMGN3-202ENST00000344726 TAS2R46P59540 309 aa11.04□□□□□ -0.64
HMGN3-202ENST00000344726 RHOGP84095 191 aa11.04□□□□□ -0.64
HMGN3-202ENST00000344726 KLF5Q13887 457 aaPredicted RBP11.04□□□□□ -0.64
HMGN3-202ENST00000344726 SNX29P2Q8IUI4 249 aa11.04□□□□□ -0.64
HMGN3-202ENST00000344726 USMG5Q96IX5 58 aa11.04□□□□□ -0.64
HMGN3-202ENST00000344726 MRPS26Q9BYN8 205 aaKnown RBP11.04□□□□□ -0.64
HMGN3-202ENST00000344726 BET1LQ9NYM9 111 aa11.04□□□□□ -0.64
HMGN3-202ENST00000344726 PEF1Q9UBV8 284 aaKnown RBP11.04□□□□□ -0.64
HMGN3-202ENST00000344726 STAB2Q8WWQ8 2551 aa11.03□□□□□ -0.64
HMGN3-202ENST00000344726 S1PR2O95136 353 aa11.03□□□□□ -0.64
HMGN3-202ENST00000344726 HPRT1P00492 218 aa11.03□□□□□ -0.64
HMGN3-202ENST00000344726 AREGP15514 252 aa11.03□□□□□ -0.64
HMGN3-202ENST00000344726 ZP3P21754 424 aa11.03□□□□□ -0.64
HMGN3-202ENST00000344726 MAS1LP35410 378 aa11.03□□□□□ -0.64
HMGN3-202ENST00000344726 RPL8P62917 257 aaKnown RBP11.03□□□□□ -0.64
HMGN3-202ENST00000344726 CATR1Q13166 79 aa11.03□□□□□ -0.64
HMGN3-202ENST00000344726 DCTN2Q13561 401 aaKnown RBP11.03□□□□□ -0.64
HMGN3-202ENST00000344726 POU2AF1Q16633 256 aa11.03□□□□□ -0.64
HMGN3-202ENST00000344726 AADACL3Q5VUY0 350 aa11.03□□□□□ -0.64
HMGN3-202ENST00000344726 FYTTD1Q96QD9 318 aaKnown RBP11.03□□□□□ -0.64
HMGN3-202ENST00000344726 ASCL2Q99929 193 aa11.03□□□□□ -0.64
HMGN3-202ENST00000344726 NBEAL2Q6ZNJ1 2754 aa11.03□□□□□ -0.64
HMGN3-202ENST00000344726 SMIM31A0A1B0GVY4 71 aa11.02□□□□□ -0.65
HMGN3-202ENST00000344726 PGLYRP1O75594 196 aaPredicted RBP11.02□□□□□ -0.65
HMGN3-202ENST00000344726 OR2J3O76001 311 aa11.02□□□□□ -0.65
HMGN3-202ENST00000344726 LY86O95711 162 aa11.02□□□□□ -0.65
HMGN3-202ENST00000344726 RLN1P04808 185 aa11.02□□□□□ -0.65
HMGN3-202ENST00000344726 ZNF182P17025 639 aaPredicted RBP11.02□□□□□ -0.65
HMGN3-202ENST00000344726 SYNJ2BPP57105 145 aa11.02□□□□□ -0.65
HMGN3-202ENST00000344726 TAS2R31P59538 309 aa11.02□□□□□ -0.65
HMGN3-202ENST00000344726 EXOSC2Q13868 293 aaKnown RBP11.02□□□□□ -0.65
HMGN3-202ENST00000344726 IL34Q6ZMJ4 242 aa11.02□□□□□ -0.65
HMGN3-202ENST00000344726 SCPEP1Q9HB40 452 aa11.02□□□□□ -0.65
HMGN3-202ENST00000344726 SLC2A9Q9NRM0 540 aa11.02□□□□□ -0.65
HMGN3-202ENST00000344726 ZNF257Q9Y2Q1 563 aa11.02□□□□□ -0.65
HMGN3-202ENST00000344726 DNAH7Q8WXX0 4024 aa11.01□□□□□ -0.65
HMGN3-202ENST00000344726 FAM223BA6NKX1 122 aa11.01□□□□□ -0.65
HMGN3-202ENST00000344726 NPIPB5A8MRT5 1133 aa11.01□□□□□ -0.65
HMGN3-202ENST00000344726 BMPR1BO00238 502 aa11.01□□□□□ -0.65
HMGN3-202ENST00000344726 UPK2O00526 184 aa11.01□□□□□ -0.65
HMGN3-202ENST00000344726 RPA2P15927 270 aa11.01□□□□□ -0.65
HMGN3-202ENST00000344726 NQO2P16083 231 aa11.01□□□□□ -0.65
HMGN3-202ENST00000344726 HLA-GP17693 338 aa11.01□□□□□ -0.65
HMGN3-202ENST00000344726 OR2B8PP59922 312 aa11.01□□□□□ -0.65
HMGN3-202ENST00000344726 ATP5G2Q06055 141 aa11.01□□□□□ -0.65
HMGN3-202ENST00000344726 RNASE12Q5GAN4 147 aaKnown RBP11.01□□□□□ -0.65
HMGN3-202ENST00000344726 GPR141Q7Z602 305 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms