RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 TREML4Q6UXN2 200 aa17.63■□□□□ 0.41
CCDC38-201ENST00000344280 C1orf87Q8N0U7 546 aa17.63■□□□□ 0.41
CCDC38-201ENST00000344280 FAM216BQ8N7L0 139 aa17.63■□□□□ 0.41
CCDC38-201ENST00000344280 ZNF251Q9BRH9 671 aa17.63■□□□□ 0.41
CCDC38-201ENST00000344280 SFXN3Q9BWM7 321 aa17.63■□□□□ 0.41
CCDC38-201ENST00000344280 NIT2Q9NQR4 276 aa17.63■□□□□ 0.41
CCDC38-201ENST00000344280 YLPM1P49750 1951 aaKnown RBP17.63■□□□□ 0.41
CCDC38-201ENST00000344280 TANC2Q9HCD6 1990 aa17.63■□□□□ 0.41
CCDC38-201ENST00000344280 ZGRF1Q86YA3 2104 aa17.63■□□□□ 0.41
CCDC38-201ENST00000344280 CD40P25942 277 aa17.63■□□□□ 0.41
CCDC38-201ENST00000344280 RPL23P62829 140 aaKnown RBP17.63■□□□□ 0.41
CCDC38-201ENST00000344280 ABHD5Q8WTS1 349 aa17.63■□□□□ 0.41
CCDC38-201ENST00000344280 GAFA1Q96PS6 74 aa17.63■□□□□ 0.41
CCDC38-201ENST00000344280 GYPAP02724 150 aa17.62■□□□□ 0.41
CCDC38-201ENST00000344280 COL8A2P25067 703 aa17.62■□□□□ 0.41
CCDC38-201ENST00000344280 C3orf36Q3SXR2 165 aa17.62■□□□□ 0.41
CCDC38-201ENST00000344280 SDSLQ96GA7 329 aa17.62■□□□□ 0.41
CCDC38-201ENST00000344280 PATZ1Q9HBE1 687 aaKnown RBP17.62■□□□□ 0.41
CCDC38-201ENST00000344280 ZNRD1Q9P1U0 126 aa17.62■□□□□ 0.41
CCDC38-201ENST00000344280 KALRNO60229 2985 aa17.62■□□□□ 0.41
CCDC38-201ENST00000344280 TMEM250H0YL14 139 aa17.61■□□□□ 0.41
CCDC38-201ENST00000344280 MYOD1P15172 320 aa17.61■□□□□ 0.41
CCDC38-201ENST00000344280 NPPCP23582 126 aa17.61■□□□□ 0.41
CCDC38-201ENST00000344280 GFI1BQ5VTD9 330 aa17.61■□□□□ 0.41
CCDC38-201ENST00000344280 C16orf82Q7Z2V1 217 aa17.61■□□□□ 0.41
CCDC38-201ENST00000344280 ZNF383Q8NA42 475 aa17.61■□□□□ 0.41
CCDC38-201ENST00000344280 NECAP1Q8NC96 275 aa17.61■□□□□ 0.41
CCDC38-201ENST00000344280 OR52E5Q8NH55 327 aa17.61■□□□□ 0.41
CCDC38-201ENST00000344280 FRZBQ92765 325 aa17.61■□□□□ 0.41
CCDC38-201ENST00000344280 MS4A5Q9H3V2 200 aa17.61■□□□□ 0.41
CCDC38-201ENST00000344280 MANBALQ9NQG1 85 aa17.61■□□□□ 0.41
CCDC38-201ENST00000344280 IL19Q9UHD0 177 aa17.61■□□□□ 0.41
CCDC38-201ENST00000344280 TCF19Q9Y242 345 aa17.61■□□□□ 0.41
CCDC38-201ENST00000344280 TNCP24821 2201 aa17.61■□□□□ 0.41
CCDC38-201ENST00000344280 GNG10P50151 68 aa17.61■□□□□ 0.41
CCDC38-201ENST00000344280 ACOT6Q3I5F7 207 aaPredicted RBP17.61■□□□□ 0.41
CCDC38-201ENST00000344280 C4orf17Q53FE4 359 aa17.61■□□□□ 0.41
CCDC38-201ENST00000344280 LYG1Q8N1E2 194 aa17.61■□□□□ 0.41
CCDC38-201ENST00000344280 FAM57AQ8TBR7 257 aa17.61■□□□□ 0.41
CCDC38-201ENST00000344280 DIRC2Q96SL1 478 aa17.61■□□□□ 0.41
CCDC38-201ENST00000344280 DYSFO75923 2080 aa17.61■□□□□ 0.41
CCDC38-201ENST00000344280 APC2O95996 2303 aa17.6■□□□□ 0.41
CCDC38-201ENST00000344280 BSXQ3C1V8 233 aa17.6■□□□□ 0.41
CCDC38-201ENST00000344280 PDLIM3Q53GG5 364 aaPredicted RBP17.6■□□□□ 0.41
CCDC38-201ENST00000344280 OR51G1Q8NGK1 321 aa17.6■□□□□ 0.41
CCDC38-201ENST00000344280 C1orf159Q96HA4 380 aa17.6■□□□□ 0.41
CCDC38-201ENST00000344280 RHOVQ96L33 236 aa17.6■□□□□ 0.41
CCDC38-201ENST00000344280 MGST2Q99735 147 aa17.6■□□□□ 0.41
CCDC38-201ENST00000344280 TCEAL7Q9BRU2 100 aa17.6■□□□□ 0.41
CCDC38-201ENST00000344280 TRGV10A0A0A0MS01 117 aa17.6■□□□□ 0.41
CCDC38-201ENST00000344280 CRYABP02511 175 aaKnown RBP17.6■□□□□ 0.41
CCDC38-201ENST00000344280 TRGC1P0CF51 173 aa17.6■□□□□ 0.41
CCDC38-201ENST00000344280 CDX1P47902 265 aaPredicted RBP17.6■□□□□ 0.41
CCDC38-201ENST00000344280 RAB7AP51149 207 aa17.6■□□□□ 0.41
CCDC38-201ENST00000344280 OR4A47Q6IF82 309 aa17.6■□□□□ 0.41
CCDC38-201ENST00000344280 ZCCHC24Q8N2G6 241 aaKnown RBP17.6■□□□□ 0.41
CCDC38-201ENST00000344280 OR4S2Q8NH73 311 aa17.6■□□□□ 0.41
CCDC38-201ENST00000344280 SEC14L6B5MCN3 397 aa17.59■□□□□ 0.41
CCDC38-201ENST00000344280 PHOX2AO14813 284 aa17.59■□□□□ 0.41
CCDC38-201ENST00000344280 UBE2G2P60604 165 aa17.59■□□□□ 0.41
CCDC38-201ENST00000344280 MIC13Q5XKP0 118 aa17.59■□□□□ 0.41
CCDC38-201ENST00000344280 FAM216AQ8WUB2 273 aa17.59■□□□□ 0.41
CCDC38-201ENST00000344280 MUC6Q6W4X9 2439 aa17.59■□□□□ 0.41
CCDC38-201ENST00000344280 C15orf61A6NNL5 157 aa17.59■□□□□ 0.41
CCDC38-201ENST00000344280 C11orf94C9JXX5 98 aa17.59■□□□□ 0.41
CCDC38-201ENST00000344280 OPN1MWP04001 364 aa17.59■□□□□ 0.41
CCDC38-201ENST00000344280 OPN1MW2P0DN77 364 aa17.59■□□□□ 0.41
CCDC38-201ENST00000344280 OPN1MW3P0DN78 364 aa17.59■□□□□ 0.41
CCDC38-201ENST00000344280 CCL8P80075 99 aa17.59■□□□□ 0.41
CCDC38-201ENST00000344280 ZNF439Q8NDP4 499 aa17.59■□□□□ 0.41
CCDC38-201ENST00000344280 CTDSP1Q9GZU7 261 aa17.59■□□□□ 0.41
CCDC38-201ENST00000344280 TRBV24-1A0A075B6N3 115 aa17.58■□□□□ 0.4
CCDC38-201ENST00000344280 SELENOVP59797 346 aa17.58■□□□□ 0.4
CCDC38-201ENST00000344280 MRPS11P82912 194 aaKnown RBP17.58■□□□□ 0.4
CCDC38-201ENST00000344280 PDZD11Q5EBL8 140 aa17.58■□□□□ 0.4
CCDC38-201ENST00000344280 ELOVL1Q9BW60 279 aa17.58■□□□□ 0.4
CCDC38-201ENST00000344280 GSN-AS1Q9NRJ2 163 aa17.58■□□□□ 0.4
CCDC38-201ENST00000344280 GAB2Q9UQC2 676 aa17.58■□□□□ 0.4
CCDC38-201ENST00000344280 PKDREJQ9NTG1 2253 aa17.58■□□□□ 0.4
CCDC38-201ENST00000344280 ITGB1BP1O14713 200 aa17.58■□□□□ 0.4
CCDC38-201ENST00000344280 SOD3P08294 240 aa17.58■□□□□ 0.4
CCDC38-201ENST00000344280 KIR2DS2P43631 304 aa17.58■□□□□ 0.4
CCDC38-201ENST00000344280 ATP5G3P48201 142 aa17.58■□□□□ 0.4
CCDC38-201ENST00000344280 RPP30P78346 268 aaKnown RBP17.58■□□□□ 0.4
CCDC38-201ENST00000344280 CLEC12BQ2HXU8 276 aa17.58■□□□□ 0.4
CCDC38-201ENST00000344280 ZNF788Q6ZQV5 615 aa17.58■□□□□ 0.4
CCDC38-201ENST00000344280 PRSS33Q8NF86 280 aa17.58■□□□□ 0.4
CCDC38-201ENST00000344280 OR13D1Q8NGV5 346 aa17.58■□□□□ 0.4
CCDC38-201ENST00000344280 ZCCHC14Q8WYQ9 949 aaKnown RBP17.58■□□□□ 0.4
CCDC38-201ENST00000344280 NCOR1P1Q9H4R4 102 aa17.58■□□□□ 0.4
CCDC38-201ENST00000344280 PTPRZ1P23471 2315 aaPredicted RBP17.57■□□□□ 0.4
CCDC38-201ENST00000344280 PFN1P07737 140 aaKnown RBP17.57■□□□□ 0.4
CCDC38-201ENST00000344280 NEIL1Q96FI4 390 aaPredicted RBP17.57■□□□□ 0.4
CCDC38-201ENST00000344280 GGTLC1Q9BX51 225 aa17.57■□□□□ 0.4
CCDC38-201ENST00000344280 A0A0G2JNJ9 132 aa17.56■□□□□ 0.4
CCDC38-201ENST00000344280 FABP1P07148 127 aa17.56■□□□□ 0.4
CCDC38-201ENST00000344280 TMPRSS3P57727 454 aa17.56■□□□□ 0.4
CCDC38-201ENST00000344280 ARSJQ5FYB0 599 aaPredicted RBP17.56■□□□□ 0.4
CCDC38-201ENST00000344280 SSMEM1Q8WWF3 244 aa17.56■□□□□ 0.4
CCDC38-201ENST00000344280 TMEM14BQ9NUH8 114 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms