RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 Q0VG73 95 aa12.4□□□□□ -0.42
CLCN1-201ENST00000343257 RPS19BP1Q86WX3 136 aaKnown RBP12.4□□□□□ -0.42
CLCN1-201ENST00000343257 NIT1Q86X76 327 aa12.4□□□□□ -0.42
CLCN1-201ENST00000343257 OR4P4Q8NGL7 312 aa12.4□□□□□ -0.42
CLCN1-201ENST00000343257 SSBP3Q9BWW4 388 aaPredicted RBP12.4□□□□□ -0.42
CLCN1-201ENST00000343257 HEYLQ9NQ87 328 aaPredicted RBP12.4□□□□□ -0.42
CLCN1-201ENST00000343257 ZNF324O75467 553 aaPredicted RBP12.4□□□□□ -0.42
CLCN1-201ENST00000343257 NXPH2O95156 264 aa12.4□□□□□ -0.42
CLCN1-201ENST00000343257 CRYBB3P26998 211 aa12.4□□□□□ -0.42
CLCN1-201ENST00000343257 CCL7P80098 99 aa12.4□□□□□ -0.42
CLCN1-201ENST00000343257 Q6P435 159 aa12.4□□□□□ -0.42
CLCN1-201ENST00000343257 EAF1Q96JC9 268 aaPredicted RBP12.4□□□□□ -0.42
CLCN1-201ENST00000343257 DNAJC13O75165 2243 aa12.4□□□□□ -0.42
CLCN1-201ENST00000343257 PIGBOS1A0A0B4J2F0 54 aa12.4□□□□□ -0.42
CLCN1-201ENST00000343257 AESQ08117 197 aa12.4□□□□□ -0.42
CLCN1-201ENST00000343257 STUMQ69YW2 141 aa12.4□□□□□ -0.42
CLCN1-201ENST00000343257 MRGPRDQ8TDS7 321 aa12.4□□□□□ -0.42
CLCN1-201ENST00000343257 WDR83OSQ9Y284 106 aa12.4□□□□□ -0.42
CLCN1-201ENST00000343257 LINC00473A8K010 186 aa12.39□□□□□ -0.43
CLCN1-201ENST00000343257 RNF212BA8MTL3 300 aa12.39□□□□□ -0.43
CLCN1-201ENST00000343257 IGLV3-19P01714 112 aa12.39□□□□□ -0.43
CLCN1-201ENST00000343257 OR9G9P0C7N8 305 aa12.39□□□□□ -0.43
CLCN1-201ENST00000343257 CDKN1BP46527 198 aa12.39□□□□□ -0.43
CLCN1-201ENST00000343257 GNG3P63215 75 aa12.39□□□□□ -0.43
CLCN1-201ENST00000343257 LDLRAD2Q5SZI1 272 aa12.39□□□□□ -0.43
CLCN1-201ENST00000343257 TCTEX1D1Q8N7M0 179 aa12.39□□□□□ -0.43
CLCN1-201ENST00000343257 MGST2Q99735 147 aa12.39□□□□□ -0.43
CLCN1-201ENST00000343257 SLC35D1Q9NTN3 355 aa12.39□□□□□ -0.43
CLCN1-201ENST00000343257 GJE1A6NN92 205 aa12.39□□□□□ -0.43
CLCN1-201ENST00000343257 B3GALT5-AS1P59052 145 aa12.39□□□□□ -0.43
CLCN1-201ENST00000343257 CENPWQ5EE01 88 aa12.39□□□□□ -0.43
CLCN1-201ENST00000343257 TREML4Q6UXN2 200 aa12.39□□□□□ -0.43
CLCN1-201ENST00000343257 TSKUQ8WUA8 353 aa12.39□□□□□ -0.43
CLCN1-201ENST00000343257 FAM122AQ96E09 287 aa12.39□□□□□ -0.43
CLCN1-201ENST00000343257 CLCF1Q9UBD9 225 aa12.39□□□□□ -0.43
CLCN1-201ENST00000343257 V9GYV3 84 aa12.39□□□□□ -0.43
CLCN1-201ENST00000343257 A0A1W2PQM1 296 aa12.38□□□□□ -0.43
CLCN1-201ENST00000343257 C2CD4DB7Z1M9 353 aa12.38□□□□□ -0.43
CLCN1-201ENST00000343257 GCHFRP30047 84 aa12.38□□□□□ -0.43
CLCN1-201ENST00000343257 GPR6P46095 362 aaPredicted RBP12.38□□□□□ -0.43
CLCN1-201ENST00000343257 PRRX1P54821 245 aa12.38□□□□□ -0.43
CLCN1-201ENST00000343257 COLCA1Q6ZS62 124 aa12.38□□□□□ -0.43
CLCN1-201ENST00000343257 TUSC5Q8IXB3 177 aa12.38□□□□□ -0.43
CLCN1-201ENST00000343257 KIAA1549Q9HCM3 1950 aa12.38□□□□□ -0.43
CLCN1-201ENST00000343257 BMPR1BO00238 502 aa12.38□□□□□ -0.43
CLCN1-201ENST00000343257 ITGB1BP1O14713 200 aa12.38□□□□□ -0.43
CLCN1-201ENST00000343257 CXorf1O96002 111 aa12.38□□□□□ -0.43
CLCN1-201ENST00000343257 GDF1P27539 372 aa12.38□□□□□ -0.43
CLCN1-201ENST00000343257 EPHA8P29322 1005 aaPredicted RBP12.38□□□□□ -0.43
CLCN1-201ENST00000343257 DUSP3P51452 185 aaPredicted RBP12.38□□□□□ -0.43
CLCN1-201ENST00000343257 TRIP6Q15654 476 aaKnown RBP12.38□□□□□ -0.43
CLCN1-201ENST00000343257 ZNF497Q6ZNH5 498 aa12.38□□□□□ -0.43
CLCN1-201ENST00000343257 ZNF645Q8N7E2 425 aa12.38□□□□□ -0.43
CLCN1-201ENST00000343257 PSG11Q9UQ72 335 aa12.38□□□□□ -0.43
CLCN1-201ENST00000343257 TIMM8BQ9Y5J9 83 aaPredicted RBP12.38□□□□□ -0.43
CLCN1-201ENST00000343257 STAG3L2P0CL84 134 aa12.38□□□□□ -0.43
CLCN1-201ENST00000343257 STAG3L3P0CL85 134 aa12.38□□□□□ -0.43
CLCN1-201ENST00000343257 GNG4P50150 75 aa12.38□□□□□ -0.43
CLCN1-201ENST00000343257 TMEM136Q6ZRR5 245 aa12.38□□□□□ -0.43
CLCN1-201ENST00000343257 KLHDC1Q8N7A1 406 aa12.38□□□□□ -0.43
CLCN1-201ENST00000343257 PHF7Q9BWX1 381 aaPredicted RBP12.38□□□□□ -0.43
CLCN1-201ENST00000343257 HINT2Q9BX68 163 aa12.38□□□□□ -0.43
CLCN1-201ENST00000343257 KCNIP1Q9NZI2 227 aa12.38□□□□□ -0.43
CLCN1-201ENST00000343257 WNT9BO14905 357 aa12.37□□□□□ -0.43
CLCN1-201ENST00000343257 P04436 131 aa12.37□□□□□ -0.43
CLCN1-201ENST00000343257 PMCHL1Q16048 86 aa12.37□□□□□ -0.43
CLCN1-201ENST00000343257 NINJ1Q92982 152 aa12.37□□□□□ -0.43
CLCN1-201ENST00000343257 DCTN5Q9BTE1 182 aa12.37□□□□□ -0.43
CLCN1-201ENST00000343257 SFXN3Q9BWM7 321 aa12.37□□□□□ -0.43
CLCN1-201ENST00000343257 TRBV6-6A0A0A6YYG2 114 aa12.37□□□□□ -0.43
CLCN1-201ENST00000343257 C12orf77C9JDV5 145 aa12.37□□□□□ -0.43
CLCN1-201ENST00000343257 PSPNO60542 156 aa12.37□□□□□ -0.43
CLCN1-201ENST00000343257 FCGR3BO75015 233 aa12.37□□□□□ -0.43
CLCN1-201ENST00000343257 CATR1Q13166 79 aa12.37□□□□□ -0.43
CLCN1-201ENST00000343257 KIR3DL3Q8N743 410 aa12.37□□□□□ -0.43
CLCN1-201ENST00000343257 ZNF596Q8TC21 504 aa12.37□□□□□ -0.43
CLCN1-201ENST00000343257 GALMQ96C23 342 aa12.37□□□□□ -0.43
CLCN1-201ENST00000343257 GGTLC1Q9BX51 225 aa12.37□□□□□ -0.43
CLCN1-201ENST00000343257 GP6Q9HCN6 339 aa12.37□□□□□ -0.43
CLCN1-201ENST00000343257 TRAV3A0A0B4J244 114 aa12.36□□□□□ -0.43
CLCN1-201ENST00000343257 IGHV2OR16-5A0A0B4J2B6 119 aa12.36□□□□□ -0.43
CLCN1-201ENST00000343257 PSG1P11464 419 aa12.36□□□□□ -0.43
CLCN1-201ENST00000343257 IGLL1P15814 213 aa12.36□□□□□ -0.43
CLCN1-201ENST00000343257 TNFSF4P23510 183 aa12.36□□□□□ -0.43
CLCN1-201ENST00000343257 GABRA2P47869 451 aa12.36□□□□□ -0.43
CLCN1-201ENST00000343257 TNXAQ16473 311 aa12.36□□□□□ -0.43
CLCN1-201ENST00000343257 ZNF718Q3SXZ3 478 aa12.36□□□□□ -0.43
CLCN1-201ENST00000343257 RNASEKQ6P5S7 137 aaKnown RBP12.36□□□□□ -0.43
CLCN1-201ENST00000343257 ZNF826PQ6ZT77 177 aa12.36□□□□□ -0.43
CLCN1-201ENST00000343257 CDC42EP3Q9UKI2 254 aa12.36□□□□□ -0.43
CLCN1-201ENST00000343257 IGHV5-10-1A0A0J9YXX1 117 aa12.36□□□□□ -0.43
CLCN1-201ENST00000343257 HELTA6NFD8 242 aa12.36□□□□□ -0.43
CLCN1-201ENST00000343257 SH2D7A6NKC9 451 aaPredicted RBP12.36□□□□□ -0.43
CLCN1-201ENST00000343257 H0Y8G0 127 aa12.36□□□□□ -0.43
CLCN1-201ENST00000343257 OR10J4P0C629 311 aa12.36□□□□□ -0.43
CLCN1-201ENST00000343257 SSTR5P35346 364 aa12.36□□□□□ -0.43
CLCN1-201ENST00000343257 ALKBH6Q3KRA9 238 aa12.36□□□□□ -0.43
CLCN1-201ENST00000343257 MCRIP2Q9BUT9 160 aaKnown RBP12.36□□□□□ -0.43
CLCN1-201ENST00000343257 SSBP4Q9BWG4 385 aaPredicted RBP12.36□□□□□ -0.43
CLCN1-201ENST00000343257 CLEC5AQ9NY25 188 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms