RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 TIMP4Q99727 224 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 PRDM13Q9H4Q3 707 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 CALYQ9NYX4 217 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 FAM87AP0C7U9 286 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 ARL14EPLP0DKL9 152 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 SRSF4Q08170 494 aaKnown RBP6.85□□□□□ -1.31
UBE4B-202ENST00000343090 KCNMB1Q16558 191 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 COX19Q49B96 90 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 C19orf35Q6ZS72 473 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 NIT1Q86X76 327 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 NUDT10Q8NFP7 164 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 WDYHV1Q96HA8 205 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 IMMP2LQ96T52 175 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 ASXL3Q9C0F0 2248 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 IFITM10A6NMD0 228 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 H3BTX0 84 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 REG1AP05451 166 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 LINC00869P0C866 280 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 KIAA1644Q3SXP7 199 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 ZNF788Q6ZQV5 615 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 GRAMD2BQ96HH9 432 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 DIRC2Q96SL1 478 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 CHRNA10Q9GZZ6 450 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 MS4A5Q9H3V2 200 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 RPRMQ9NS64 109 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 ZFP30Q9Y2G7 519 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 IGKV1-9A0A0C4DH69 117 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 ECSCRQ19T08 205 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 C12orf54Q6X4T0 127 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 ZNRF1Q8ND25 227 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 QTRT1Q9BXR0 403 aaKnown RBP6.85□□□□□ -1.31
UBE4B-202ENST00000343090 LDLRAD4O15165 306 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 SMPD2O60906 423 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 RPL39P5Q59GN2 51 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 UNQ6494/PRO21346Q6UXR6 183 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 SAXO1Q8IYX7 474 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 NUDT11Q96G61 164 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 LYZL4Q96KX0 146 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 TM2D1Q9BX74 207 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 TMEM106BQ9NUM4 274 aa6.85□□□□□ -1.31
UBE4B-202ENST00000343090 DPRXA6NFQ7 191 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 CIDEAO60543 219 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 NPIPB7O75200 414 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 PRSS1P07477 247 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 OTX1P32242 354 aaPredicted RBP6.84□□□□□ -1.31
UBE4B-202ENST00000343090 LGALS7P47929 136 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 PQLC2Q6ZP29 291 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 CYP2G1PQ6ZSU1 146 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 WDFY1Q8IWB7 410 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 GBGT1Q8N5D6 347 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 MAP1LC3CQ9BXW4 147 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 KRTCAP3Q53RY4 240 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 FAM201AQ5SY85 155 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 PAQR4Q8N4S7 273 aaPredicted RBP6.84□□□□□ -1.31
UBE4B-202ENST00000343090 FGF11Q92914 225 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 ZNF703Q9H7S9 590 aaPredicted RBP6.84□□□□□ -1.31
UBE4B-202ENST00000343090 A0A0A6YYD4 124 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 LOC389332A0A1B0GUA5 103 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 F2RL2O00254 374 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 TNFSF13O75888 250 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 UMODP07911 640 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 RPL7P18124 248 aaKnown RBP6.84□□□□□ -1.31
UBE4B-202ENST00000343090 ZNF441Q8N8Z8 693 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 OR8A1Q8NGG7 326 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 WBP1Q96G27 269 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 DCTN5Q9BTE1 182 aa6.84□□□□□ -1.31
UBE4B-202ENST00000343090 MRPL13Q9BYD1 178 aaKnown RBP6.84□□□□□ -1.31
UBE4B-202ENST00000343090 TBL2Q9Y4P3 447 aaKnown RBP6.84□□□□□ -1.31
UBE4B-202ENST00000343090 ARHGEF17Q96PE2 2063 aaPredicted RBP6.84□□□□□ -1.31
UBE4B-202ENST00000343090 TRBV24-1A0A075B6N3 115 aa6.84□□□□□ -1.32
UBE4B-202ENST00000343090 CCL21O00585 134 aa6.84□□□□□ -1.32
UBE4B-202ENST00000343090 SLC25A17O43808 307 aa6.84□□□□□ -1.32
UBE4B-202ENST00000343090 SP9P0CG40 484 aa6.84□□□□□ -1.32
UBE4B-202ENST00000343090 CFHR1Q03591 330 aa6.84□□□□□ -1.32
UBE4B-202ENST00000343090 TEX38Q6PEX7 206 aa6.84□□□□□ -1.32
UBE4B-202ENST00000343090 ASCL5Q7RTU5 278 aa6.84□□□□□ -1.32
UBE4B-202ENST00000343090 FADS6Q8N9I5 356 aa6.84□□□□□ -1.32
UBE4B-202ENST00000343090 RCC1LQ96I51 464 aaKnown RBP6.84□□□□□ -1.32
UBE4B-202ENST00000343090 IGKV1D-8A0A087WSZ0 117 aa6.83□□□□□ -1.32
UBE4B-202ENST00000343090 A0A1B0GV72 72 aa6.83□□□□□ -1.32
UBE4B-202ENST00000343090 HYPMO75409 117 aa6.83□□□□□ -1.32
UBE4B-202ENST00000343090 IGLV3-19P01714 112 aa6.83□□□□□ -1.32
UBE4B-202ENST00000343090 TFF1P04155 84 aa6.83□□□□□ -1.32
UBE4B-202ENST00000343090 HIST1H1EP10412 219 aaKnown RBP6.83□□□□□ -1.32
UBE4B-202ENST00000343090 COMPP49747 757 aaPredicted RBP6.83□□□□□ -1.32
UBE4B-202ENST00000343090 LCN2P80188 198 aa6.83□□□□□ -1.32
UBE4B-202ENST00000343090 HIGD1AQ9Y241 93 aa6.83□□□□□ -1.32
UBE4B-202ENST00000343090 ICE1Q9Y2F5 2266 aa6.83□□□□□ -1.32
UBE4B-202ENST00000343090 SERF1AO75920 110 aa6.83□□□□□ -1.32
UBE4B-202ENST00000343090 CELA3BP08861 270 aa6.83□□□□□ -1.32
UBE4B-202ENST00000343090 SRIP30626 198 aa6.83□□□□□ -1.32
UBE4B-202ENST00000343090 RND2P52198 227 aa6.83□□□□□ -1.32
UBE4B-202ENST00000343090 RPL23P62829 140 aaKnown RBP6.83□□□□□ -1.32
UBE4B-202ENST00000343090 RPL8P62917 257 aaKnown RBP6.83□□□□□ -1.32
UBE4B-202ENST00000343090 KIF26BQ2KJY2 2108 aa6.83□□□□□ -1.32
UBE4B-202ENST00000343090 IBA57Q5T440 356 aaKnown RBP6.83□□□□□ -1.32
UBE4B-202ENST00000343090 SLC25A34Q6PIV7 304 aa6.83□□□□□ -1.32
UBE4B-202ENST00000343090 SSX8Q7RTT4 187 aa6.83□□□□□ -1.32
UBE4B-202ENST00000343090 ZNF430Q9H8G1 570 aaPredicted RBP6.83□□□□□ -1.32
UBE4B-202ENST00000343090 AHRRA9YTQ3 701 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms