RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 DOCK9Q9BZ29 2069 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 E9PLN8 166 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 HYPMO75409 117 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 CRYBB3P26998 211 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 MC5RP33032 325 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 HGFACQ04756 655 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 OR8I2Q8N0Y5 310 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 STARD4Q96DR4 205 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 RASL11BQ9BPW5 248 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 IDI2-AS1Q9NZ38 188 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 TRBV23-1A0A0A0MS06 115 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 MT-ND6P03923 174 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 OR4A8P0C604 315 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 HIST1H1EP10412 219 aaKnown RBP6.06□□□□□ -1.44
VCAN-202ENST00000342785 DNM1P46Q6ZS02 220 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 WDFY1Q8IWB7 410 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 VN1R17PQ8TDU5 208 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 FAM222BQ8WU58 562 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 NABP2Q9BQ15 211 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 ASCL3Q9NQ33 180 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 RNF24Q9Y225 148 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 FAM208BQ5VWN6 2430 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 C8orf88P0DMB2 117 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 HIST1H1BP16401 226 aaKnown RBP6.06□□□□□ -1.44
VCAN-202ENST00000342785 GGACTQ9BVM4 153 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 SDF2L1Q9HCN8 221 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 ZNF729A6NN14 1252 aaPredicted RBP6.06□□□□□ -1.44
VCAN-202ENST00000342785 COLCA2A8K830 154 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 RRHO14718 337 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 ELOBQ15370 118 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 DIRC2Q96SL1 478 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 HSPB9Q9BQS6 159 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 ZDHHC8Q9ULC8 765 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 IGHV2OR16-5A0A0B4J2B6 119 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 BRS3P32247 399 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 TFF3Q07654 80 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 ICAM4Q14773 271 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 ASCL5Q7RTU5 278 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 MMD2Q8IY49 270 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 Q8WTZ3 238 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 SPSB4Q96A44 273 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 SFXN3Q9BWM7 321 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 IQCF6A8MYZ5 107 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 M0R2Z0 102 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 VENTXO95231 258 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 IGHV3-48P01763 117 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 FAM27E3Q08E93 113 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 Q0VFX4 171 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 TIMM23BQ5SRD1 257 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 C9orf106Q8NAJ2 232 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 OR8B3Q8NGG8 313 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 OR8B2Q96RD0 313 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 CA2P00918 260 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 IBA57Q5T440 356 aaKnown RBP6.05□□□□□ -1.44
VCAN-202ENST00000342785 ZNF324BQ6AW86 544 aaPredicted RBP6.05□□□□□ -1.44
VCAN-202ENST00000342785 FAM216BQ8N7L0 139 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 STPG3Q8N7X2 389 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 GATAD1Q8WUU5 269 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 WFIKKN1Q96NZ8 548 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 WDR87Q6ZQQ6 2873 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 DDTP30046 118 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 GCHFRP30047 84 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 FCER1GP30273 86 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 RTP5Q14D33 572 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 CSRP2Q16527 193 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 Q6ZN92 141 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 DNAJC4Q9NNZ3 241 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 DOCK10Q96BY6 2186 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 FOXL2NBQ6ZUU3 175 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 NPIPB3Q92617 1050 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 ZNF430Q9H8G1 570 aaPredicted RBP6.05□□□□□ -1.44
VCAN-202ENST00000342785 TNFRSF19Q9NS68 423 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 YTHDF2Q9Y5A9 579 aaKnown RBP6.05□□□□□ -1.44
VCAN-202ENST00000342785 FANCMQ8IYD8 2048 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 A0A087WWC5 75 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 PGPA6NDG6 321 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 TFF1P04155 84 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 CD55P08174 381 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 S100A4P26447 101 aaKnown RBP6.05□□□□□ -1.44
VCAN-202ENST00000342785 B3GALT5-AS1P59052 145 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 KIAA1644Q3SXP7 199 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 NMSQ5H8A3 153 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 C1orf162Q8NEQ5 155 aaPredicted RBP6.05□□□□□ -1.44
VCAN-202ENST00000342785 TMUB1Q9BVT8 246 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 DMRT1Q9Y5R6 373 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 RFNGQ9Y644 331 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 GCGP01275 180 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 PAFAH1B2P68402 229 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 OR51G1Q8NGK1 321 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 WASHC3Q9Y3C0 194 aa6.05□□□□□ -1.44
VCAN-202ENST00000342785 HOXA5P20719 270 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 ZNF137PP52743 207 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 SSX8Q7RTT4 187 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 AUP1Q9Y679 476 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 A8MWL6 223 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 DIRC3C9JPN6 131 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 DLL1O00548 723 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 APCSP02743 223 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 FXYD3Q14802 87 aa6.04□□□□□ -1.44
VCAN-202ENST00000342785 ZNF497Q6ZNH5 498 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms