RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 URGCP-MRPS24S4R325 110 aa12.36□□□□□ -0.43
TPM3-208ENST00000341485 CXorf65A6NEN9 183 aa12.35□□□□□ -0.43
TPM3-208ENST00000341485 B4DEV8 164 aa12.35□□□□□ -0.43
TPM3-208ENST00000341485 RBFOX2O43251 390 aaKnown RBP eCLIP12.35□□□□□ -0.43
TPM3-208ENST00000341485 PLAUP00749 431 aa12.35□□□□□ -0.43
TPM3-208ENST00000341485 MBP02144 154 aa12.35□□□□□ -0.43
TPM3-208ENST00000341485 IRF2P14316 349 aa12.35□□□□□ -0.43
TPM3-208ENST00000341485 TNFRSF1AP19438 455 aa12.35□□□□□ -0.43
TPM3-208ENST00000341485 RPS10P46783 165 aaKnown RBP12.35□□□□□ -0.43
TPM3-208ENST00000341485 CD81P60033 236 aa12.35□□□□□ -0.43
TPM3-208ENST00000341485 CCL8P80075 99 aa12.35□□□□□ -0.43
TPM3-208ENST00000341485 FABP9Q0Z7S8 132 aa12.35□□□□□ -0.43
TPM3-208ENST00000341485 TET2Q6N021 2002 aaPredicted RBP12.35□□□□□ -0.43
TPM3-208ENST00000341485 TANC2Q9HCD6 1990 aa12.35□□□□□ -0.43
TPM3-208ENST00000341485 PKD1L2Q7Z442 2459 aa12.35□□□□□ -0.43
TPM3-208ENST00000341485 TRAV3A0A0B4J244 114 aa12.34□□□□□ -0.43
TPM3-208ENST00000341485 CYB5R3P00387 301 aaPredicted RBP12.34□□□□□ -0.43
TPM3-208ENST00000341485 SPCS3P61009 180 aa12.34□□□□□ -0.43
TPM3-208ENST00000341485 RELBQ01201 579 aa12.34□□□□□ -0.43
TPM3-208ENST00000341485 PNRC1Q12796 327 aaPredicted RBP12.34□□□□□ -0.43
TPM3-208ENST00000341485 STUMQ69YW2 141 aa12.34□□□□□ -0.43
TPM3-208ENST00000341485 RBMS3Q6XE24 437 aaKnown RBP12.34□□□□□ -0.43
TPM3-208ENST00000341485 Q8N7P7 452 aa12.34□□□□□ -0.43
TPM3-208ENST00000341485 OR4A16Q8NH70 328 aa12.34□□□□□ -0.43
TPM3-208ENST00000341485 DDB2Q92466 427 aa12.34□□□□□ -0.43
TPM3-208ENST00000341485 SDSLQ96GA7 329 aa12.34□□□□□ -0.43
TPM3-208ENST00000341485 S1PR3Q99500 378 aa12.34□□□□□ -0.43
TPM3-208ENST00000341485 GFOD1Q9NXC2 390 aa12.34□□□□□ -0.43
TPM3-208ENST00000341485 TGIF2-C20orf24A0A0A6YYL0 155 aa12.34□□□□□ -0.43
TPM3-208ENST00000341485 ITGB1BP1O14713 200 aa12.34□□□□□ -0.43
TPM3-208ENST00000341485 CT45A1Q5HYN5 189 aa12.34□□□□□ -0.43
TPM3-208ENST00000341485 WDR25Q64LD2 544 aaPredicted RBP12.34□□□□□ -0.43
TPM3-208ENST00000341485 ZNF709Q8N972 641 aa12.34□□□□□ -0.43
TPM3-208ENST00000341485 CT45A3Q8NHU0 189 aa12.34□□□□□ -0.43
TPM3-208ENST00000341485 ITLN2Q8WWU7 325 aaPredicted RBP12.34□□□□□ -0.43
TPM3-208ENST00000341485 GAFA1Q96PS6 74 aa12.34□□□□□ -0.43
TPM3-208ENST00000341485 ACTR3CQ9C0K3 210 aaPredicted RBP12.34□□□□□ -0.43
TPM3-208ENST00000341485 KBTBD11-OT1A0A1B0GTJ5 212 aa12.33□□□□□ -0.44
TPM3-208ENST00000341485 B9A039 149 aa12.33□□□□□ -0.44
TPM3-208ENST00000341485 SIAH2O43255 324 aa12.33□□□□□ -0.44
TPM3-208ENST00000341485 NQO2P16083 231 aa12.33□□□□□ -0.44
TPM3-208ENST00000341485 KIR2DS2P43631 304 aa12.33□□□□□ -0.44
TPM3-208ENST00000341485 VDAC2P45880 294 aaPredicted RBP12.33□□□□□ -0.44
TPM3-208ENST00000341485 ERVK-16P61578 105 aa12.33□□□□□ -0.44
TPM3-208ENST00000341485 MEF2BQ02080 365 aaPredicted RBP12.33□□□□□ -0.44
TPM3-208ENST00000341485 TCF23Q7RTU1 214 aa12.33□□□□□ -0.44
TPM3-208ENST00000341485 ZCCHC24Q8N2G6 241 aaKnown RBP12.33□□□□□ -0.44
TPM3-208ENST00000341485 DEFB108BQ8NET1 73 aa12.33□□□□□ -0.44
TPM3-208ENST00000341485 OR52E5Q8NH55 327 aa12.33□□□□□ -0.44
TPM3-208ENST00000341485 GATAD1Q8WUU5 269 aa12.33□□□□□ -0.44
TPM3-208ENST00000341485 SAP30LQ9HAJ7 183 aa12.33□□□□□ -0.44
TPM3-208ENST00000341485 TMEM140Q9NV12 185 aa12.33□□□□□ -0.44
TPM3-208ENST00000341485 GAB2Q9UQC2 676 aa12.33□□□□□ -0.44
TPM3-208ENST00000341485 WDR83OSQ9Y284 106 aa12.33□□□□□ -0.44
TPM3-208ENST00000341485 TPRP12270 2363 aaKnown RBP12.33□□□□□ -0.44
TPM3-208ENST00000341485 AP4M1O00189 453 aa12.33□□□□□ -0.44
TPM3-208ENST00000341485 DEFA4P12838 97 aa12.33□□□□□ -0.44
TPM3-208ENST00000341485 RAB7AP51149 207 aa12.33□□□□□ -0.44
TPM3-208ENST00000341485 EFNB3Q15768 340 aa12.33□□□□□ -0.44
TPM3-208ENST00000341485 PDLIM3Q53GG5 364 aaPredicted RBP12.33□□□□□ -0.44
TPM3-208ENST00000341485 TGIF2LYQ8IUE0 185 aa12.33□□□□□ -0.44
TPM3-208ENST00000341485 RAB24Q969Q5 203 aa12.33□□□□□ -0.44
TPM3-208ENST00000341485 MS4A5Q9H3V2 200 aa12.33□□□□□ -0.44
TPM3-208ENST00000341485 ICE1Q9Y2F5 2266 aa12.32□□□□□ -0.44
TPM3-208ENST00000341485 SAA2-SAA4A0A096LPE2 208 aa12.32□□□□□ -0.44
TPM3-208ENST00000341485 C17orf112F2Z3M2 114 aa12.32□□□□□ -0.44
TPM3-208ENST00000341485 LY86O95711 162 aa12.32□□□□□ -0.44
TPM3-208ENST00000341485 SAA2P0DJI9 122 aaPredicted RBP12.32□□□□□ -0.44
TPM3-208ENST00000341485 CD1BP29016 333 aa12.32□□□□□ -0.44
TPM3-208ENST00000341485 ZNF674Q2M3X9 581 aa12.32□□□□□ -0.44
TPM3-208ENST00000341485 ZNF672Q499Z4 452 aaPredicted RBP12.32□□□□□ -0.44
TPM3-208ENST00000341485 CCL13Q99616 98 aa12.32□□□□□ -0.44
TPM3-208ENST00000341485 DCAF16Q9NXF7 216 aa12.32□□□□□ -0.44
TPM3-208ENST00000341485 TRGV10A0A0A0MS01 117 aa12.31□□□□□ -0.44
TPM3-208ENST00000341485 RRHO14718 337 aa12.31□□□□□ -0.44
TPM3-208ENST00000341485 IFNA10P01566 189 aa12.31□□□□□ -0.44
TPM3-208ENST00000341485 GYPAP02724 150 aa12.31□□□□□ -0.44
TPM3-208ENST00000341485 PSMB3P49720 205 aa12.31□□□□□ -0.44
TPM3-208ENST00000341485 RND2P52198 227 aa12.31□□□□□ -0.44
TPM3-208ENST00000341485 OR4S2Q8NH73 311 aa12.31□□□□□ -0.44
TPM3-208ENST00000341485 ZNF251Q9BRH9 671 aa12.31□□□□□ -0.44
TPM3-208ENST00000341485 DYSFO75923 2080 aa12.31□□□□□ -0.44
TPM3-208ENST00000341485 PRSS46E5RG02 174 aa12.31□□□□□ -0.44
TPM3-208ENST00000341485 S100A8P05109 93 aa12.31□□□□□ -0.44
TPM3-208ENST00000341485 RPP30P78346 268 aaKnown RBP12.31□□□□□ -0.44
TPM3-208ENST00000341485 KIAA0141Q14154 515 aaPredicted RBP12.31□□□□□ -0.44
TPM3-208ENST00000341485 ACOT6Q3I5F7 207 aaPredicted RBP12.31□□□□□ -0.44
TPM3-208ENST00000341485 ZNF788Q6ZQV5 615 aa12.31□□□□□ -0.44
TPM3-208ENST00000341485 MUC15Q8N387 334 aa12.31□□□□□ -0.44
TPM3-208ENST00000341485 FAM216BQ8N7L0 139 aa12.31□□□□□ -0.44
TPM3-208ENST00000341485 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.31□□□□□ -0.44
TPM3-208ENST00000341485 ZNF439Q8NDP4 499 aa12.31□□□□□ -0.44
TPM3-208ENST00000341485 TMEM170AQ8WVE7 144 aa12.31□□□□□ -0.44
TPM3-208ENST00000341485 SSX3Q99909 188 aa12.31□□□□□ -0.44
TPM3-208ENST00000341485 SMIM7Q9BQ49 75 aa12.31□□□□□ -0.44
TPM3-208ENST00000341485 RAB9BQ9NP90 201 aa12.31□□□□□ -0.44
TPM3-208ENST00000341485 HEYLQ9NQ87 328 aaPredicted RBP12.31□□□□□ -0.44
TPM3-208ENST00000341485 MANBALQ9NQG1 85 aa12.31□□□□□ -0.44
TPM3-208ENST00000341485 TMEM242Q9NWH2 141 aa12.31□□□□□ -0.44
TPM3-208ENST00000341485 TCF19Q9Y242 345 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms