RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 GPER1Q99527 375 aa9.96□□□□□ -0.81
RTN3-203ENST00000341307 SPIN2AQ99865 258 aa9.96□□□□□ -0.81
RTN3-203ENST00000341307 SPIN2BQ9BPZ2 258 aa9.96□□□□□ -0.81
RTN3-203ENST00000341307 WDR61Q9GZS3 305 aaKnown RBP9.96□□□□□ -0.81
RTN3-203ENST00000341307 FNDC4Q9H6D8 234 aaPredicted RBP9.96□□□□□ -0.81
RTN3-203ENST00000341307 SH2D2AQ9NP31 389 aa9.96□□□□□ -0.81
RTN3-203ENST00000341307 NECAP2Q9NVZ3 263 aa9.96□□□□□ -0.81
RTN3-203ENST00000341307 ATMQ13315 3056 aa9.96□□□□□ -0.81
RTN3-203ENST00000341307 SNURFLB1AK76 121 aa9.96□□□□□ -0.82
RTN3-203ENST00000341307 PAGE4O60829 102 aa9.96□□□□□ -0.82
RTN3-203ENST00000341307 OR10J3Q5JRS4 329 aa9.96□□□□□ -0.82
RTN3-203ENST00000341307 OR51E1Q8TCB6 317 aa9.96□□□□□ -0.82
RTN3-203ENST00000341307 TSKUQ8WUA8 353 aa9.96□□□□□ -0.82
RTN3-203ENST00000341307 CHODLQ9H9P2 273 aa9.96□□□□□ -0.82
RTN3-203ENST00000341307 IGKV1-9A0A0C4DH69 117 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 OR10J4P0C629 311 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 RFPL3SP0C7P2 107 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 LINC00869P0C866 280 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 CA7P43166 264 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 GNB1P62873 340 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 ZNF90Q03938 601 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 LRRC75BQ2VPJ9 315 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 NMSQ5H8A3 153 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 SPATA12Q7Z6I5 190 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 YRDCQ86U90 279 aaKnown RBP9.95□□□□□ -0.82
RTN3-203ENST00000341307 OR4A5Q8NH83 315 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 BORCS7Q96B45 105 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 JMJD8Q96S16 334 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 SFXN3Q9BWM7 321 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 SLC25A22Q9H936 323 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 A0A1W2PR80 420 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 TNFSF11O14788 317 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 SMIM17P0DL12 118 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 ZNF17P17021 662 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 Q56UQ5 140 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 PRAMEF5Q5TYX0 476 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 PRAMEF6Q5VXH4 476 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 ZNF324BQ6AW86 544 aaPredicted RBP9.95□□□□□ -0.82
RTN3-203ENST00000341307 C12orf54Q6X4T0 127 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 SPRY4Q9C004 299 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 LHFPL6Q9Y693 200 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 NCKAP5O14513 1909 aa9.95□□□□□ -0.82
RTN3-203ENST00000341307 MPPED1O15442 326 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 NAPSAO96009 420 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 MT-CO3P00414 261 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 IGHG1P01857 330 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 DSCR4P56555 118 aaPredicted RBP9.94□□□□□ -0.82
RTN3-203ENST00000341307 CCDC144NLQ6NUI1 221 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 ZNF695Q8IW36 515 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 SSBP4Q9BWG4 385 aaPredicted RBP9.94□□□□□ -0.82
RTN3-203ENST00000341307 DEPPQ9NTK1 212 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 AHCTF1Q8WYP5 2266 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 TRBV20OR9-2A0A075B6H5 130 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 MDFIC2A0A1B0GVS7 189 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 C7orf71A4D174 169 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 NPIPB13A6NJU9 1138 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 NPIPB4C9JG80 1138 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 NTF3P20783 257 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 LGALS4P56470 323 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 SPINK14Q6IE38 97 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 EBLN2Q6P2I7 272 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 MYO7BQ6PIF6 2116 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 PET117Q6UWS5 81 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 GTF2H5Q6ZYL4 71 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 CCDC71LQ8N9Z2 235 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 RNF133Q8WVZ7 376 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 OXGR1Q96P68 337 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 NPFFR1Q9GZQ6 430 aa9.94□□□□□ -0.82
RTN3-203ENST00000341307 ERRFI1Q9UJM3 462 aaPredicted RBP9.94□□□□□ -0.82
RTN3-203ENST00000341307 A0A0J9YW62 118 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 PINLYPA6NC86 204 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 C11orf94C9JXX5 98 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 TIMP3P35625 211 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 GUCA1AP43080 201 aaPredicted RBP9.93□□□□□ -0.82
RTN3-203ENST00000341307 THBS3P49746 956 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 HSD52Q0P140 79 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 TBR1Q16650 682 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 TCTEX1D4Q5JR98 221 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 ACSM6Q6P461 480 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 BRICD5Q6PL45 260 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 EAF1Q96JC9 268 aaPredicted RBP9.93□□□□□ -0.82
RTN3-203ENST00000341307 PLEKHJ1Q9NW61 149 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 TRAV9-1A0A075B6T8 112 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 VSTM5A8MXK1 200 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 K7EP34 96 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 RER1O15258 196 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 CRYAAP02489 173 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 P04436 131 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 SSTR5P35346 364 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 PLP1P60201 277 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 ARF1P84077 181 aaKnown RBP9.93□□□□□ -0.82
RTN3-203ENST00000341307 TMEM164Q5U3C3 297 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 OR2AE1Q8NHA4 323 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 SPSB1Q96BD6 273 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 SRXN1Q9BYN0 137 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 MOB1AQ9H8S9 216 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 IL36BQ9NZH7 164 aa9.93□□□□□ -0.82
RTN3-203ENST00000341307 PTPRBP23467 1997 aa9.92□□□□□ -0.82
RTN3-203ENST00000341307 SLC17A3O00476 420 aa9.92□□□□□ -0.82
RTN3-203ENST00000341307 NDUFB4O95168 129 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms