RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 IGHV3-48P01763 117 aa13.43□□□□□ -0.26
SCARB1-202ENST00000339570 SPCS3P61009 180 aa13.43□□□□□ -0.26
SCARB1-202ENST00000339570 FOXF2Q12947 444 aa13.43□□□□□ -0.26
SCARB1-202ENST00000339570 LINC00596Q86U02 117 aa13.43□□□□□ -0.26
SCARB1-202ENST00000339570 ZNRF1Q8ND25 227 aa13.43□□□□□ -0.26
SCARB1-202ENST00000339570 FAM216AQ8WUB2 273 aa13.43□□□□□ -0.26
SCARB1-202ENST00000339570 NANOS1Q8WY41 292 aaKnown RBP13.43□□□□□ -0.26
SCARB1-202ENST00000339570 BCL2L2Q92843 193 aaPredicted RBP13.43□□□□□ -0.26
SCARB1-202ENST00000339570 AGMATQ9BSE5 352 aa13.43□□□□□ -0.26
SCARB1-202ENST00000339570 ABI3Q9P2A4 366 aa13.43□□□□□ -0.26
SCARB1-202ENST00000339570 YTHDF2Q9Y5A9 579 aaKnown RBP13.43□□□□□ -0.26
SCARB1-202ENST00000339570 TTC28Q96AY4 2481 aa13.43□□□□□ -0.26
SCARB1-202ENST00000339570 CACNA1HO95180 2353 aa13.43□□□□□ -0.26
SCARB1-202ENST00000339570 C9orf172C9J069 976 aa13.42□□□□□ -0.26
SCARB1-202ENST00000339570 ERVFC1-1P60608 527 aa13.42□□□□□ -0.26
SCARB1-202ENST00000339570 RPL31P62899 125 aaKnown RBP13.42□□□□□ -0.26
SCARB1-202ENST00000339570 MRPL49Q13405 166 aaKnown RBP13.42□□□□□ -0.26
SCARB1-202ENST00000339570 OR10G8Q8NGN5 311 aa13.42□□□□□ -0.26
SCARB1-202ENST00000339570 TRIB1Q96RU8 372 aa13.42□□□□□ -0.26
SCARB1-202ENST00000339570 TP53TG5Q9Y2B4 290 aa13.42□□□□□ -0.26
SCARB1-202ENST00000339570 TRBV6-6A0A0A6YYG2 114 aa13.42□□□□□ -0.26
SCARB1-202ENST00000339570 HPRT1P00492 218 aa13.42□□□□□ -0.26
SCARB1-202ENST00000339570 MGST1P10620 155 aaKnown RBP13.42□□□□□ -0.26
SCARB1-202ENST00000339570 CRISP2P16562 243 aa13.42□□□□□ -0.26
SCARB1-202ENST00000339570 OR8I2Q8N0Y5 310 aa13.42□□□□□ -0.26
SCARB1-202ENST00000339570 SNURFLB1AK76 121 aa13.42□□□□□ -0.26
SCARB1-202ENST00000339570 TIMP3P35625 211 aa13.42□□□□□ -0.26
SCARB1-202ENST00000339570 MRPL54Q6P161 138 aaKnown RBP13.42□□□□□ -0.26
SCARB1-202ENST00000339570 RNASEH2CQ8TDP1 164 aaKnown RBP13.42□□□□□ -0.26
SCARB1-202ENST00000339570 SRP14P37108 136 aaKnown RBP13.41□□□□□ -0.26
SCARB1-202ENST00000339570 OR2Z1Q8NG97 314 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 OR1L6Q8NGR2 347 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 BTF3L4Q96K17 158 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 MRPL18Q9H0U6 180 aaKnown RBP13.41□□□□□ -0.26
SCARB1-202ENST00000339570 MBNL3Q9NUK0 354 aaKnown RBP13.41□□□□□ -0.26
SCARB1-202ENST00000339570 SPRR3Q9UBC9 169 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 OOEPA6NGQ2 149 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 CER1O95813 267 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 CA1P00915 261 aaPredicted RBP13.41□□□□□ -0.26
SCARB1-202ENST00000339570 CGAP01215 116 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 IRF2P14316 349 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 NTF3P20783 257 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 GNG10P50151 68 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 TREML4Q6UXN2 200 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 LRRC29Q8WV35 223 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 RNASE7Q9H1E1 156 aaKnown RBP13.41□□□□□ -0.26
SCARB1-202ENST00000339570 ELOVL5Q9NYP7 299 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 ZNRD1Q9P1U0 126 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 COX5BP10606 129 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 ATP6V1FQ16864 119 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 KRTCAP3Q53RY4 240 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 Q6ZWC4 215 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 LHFPL4Q7Z7J7 247 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 MGST2Q99735 147 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 LRFN3Q9BTN0 628 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 TIMM9Q9Y5J7 89 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 KMT2EQ8IZD2 1858 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 KALRNO60229 2985 aa13.41□□□□□ -0.26
SCARB1-202ENST00000339570 IGHV1-2P23083 117 aa13.4□□□□□ -0.26
SCARB1-202ENST00000339570 HOXC12P31275 282 aa13.4□□□□□ -0.26
SCARB1-202ENST00000339570 HTD2P86397 168 aa13.4□□□□□ -0.26
SCARB1-202ENST00000339570 HSD17B10Q99714 261 aaKnown RBP13.4□□□□□ -0.26
SCARB1-202ENST00000339570 TUBG2Q9NRH3 451 aa13.4□□□□□ -0.26
SCARB1-202ENST00000339570 RPL15P61313 204 aaKnown RBP13.4□□□□□ -0.26
SCARB1-202ENST00000339570 ERVK11-1P61568 191 aa13.4□□□□□ -0.26
SCARB1-202ENST00000339570 MLANAQ16655 118 aa13.4□□□□□ -0.26
SCARB1-202ENST00000339570 DHRS13Q6UX07 377 aa13.4□□□□□ -0.26
SCARB1-202ENST00000339570 SGK494Q96LW2 274 aa13.4□□□□□ -0.26
SCARB1-202ENST00000339570 CIB3Q96Q77 187 aaPredicted RBP13.4□□□□□ -0.26
SCARB1-202ENST00000339570 HIPK2Q9H2X6 1198 aa13.4□□□□□ -0.26
SCARB1-202ENST00000339570 BDP1A6H8Y1 2624 aa13.4□□□□□ -0.26
SCARB1-202ENST00000339570 TET2Q6N021 2002 aaPredicted RBP13.39□□□□□ -0.27
SCARB1-202ENST00000339570 TNRC6AQ8NDV7 1962 aaKnown RBP13.39□□□□□ -0.27
SCARB1-202ENST00000339570 TANC2Q9HCD6 1990 aa13.39□□□□□ -0.27
SCARB1-202ENST00000339570 TRGV5A0A0B4J1U4 118 aa13.39□□□□□ -0.27
SCARB1-202ENST00000339570 FAM90A26D6RGX4 464 aa13.39□□□□□ -0.27
SCARB1-202ENST00000339570 SS18L1O75177 396 aaPredicted RBP13.39□□□□□ -0.27
SCARB1-202ENST00000339570 TRA2AQ13595 282 aaKnown RBP eCLIP13.39□□□□□ -0.27
SCARB1-202ENST00000339570 STRADBQ9C0K7 418 aa13.39□□□□□ -0.27
SCARB1-202ENST00000339570 SPINT2O43291 252 aa13.39□□□□□ -0.27
SCARB1-202ENST00000339570 OR7C2O60412 319 aa13.39□□□□□ -0.27
SCARB1-202ENST00000339570 NPSP0C0P6 89 aa13.39□□□□□ -0.27
SCARB1-202ENST00000339570 CCKARP32238 428 aa13.39□□□□□ -0.27
SCARB1-202ENST00000339570 ZNF146Q15072 292 aa13.39□□□□□ -0.27
SCARB1-202ENST00000339570 DBX2Q6ZNG2 339 aa13.39□□□□□ -0.27
SCARB1-202ENST00000339570 FAM19A2Q8N3H0 131 aa13.39□□□□□ -0.27
SCARB1-202ENST00000339570 ARRDC1-AS1Q9H2J1 176 aa13.39□□□□□ -0.27
SCARB1-202ENST00000339570 RIF1Q5UIP0 2472 aaKnown RBP13.39□□□□□ -0.27
SCARB1-202ENST00000339570 NBASA2RRP1 2371 aa13.39□□□□□ -0.27
SCARB1-202ENST00000339570 SP1P08047 785 aa13.39□□□□□ -0.27
SCARB1-202ENST00000339570 CRYBB3P26998 211 aa13.39□□□□□ -0.27
SCARB1-202ENST00000339570 ERVK-16P61578 105 aa13.39□□□□□ -0.27
SCARB1-202ENST00000339570 Q8IYB0 196 aa13.39□□□□□ -0.27
SCARB1-202ENST00000339570 NAT8BQ9UHF3 227 aa13.39□□□□□ -0.27
SCARB1-202ENST00000339570 WIPI2Q9Y4P8 454 aa13.39□□□□□ -0.27
SCARB1-202ENST00000339570 RNF114Q9Y508 228 aa13.39□□□□□ -0.27
SCARB1-202ENST00000339570 A0A1W2PNU3 283 aaPredicted RBP13.38□□□□□ -0.27
SCARB1-202ENST00000339570 AHRRA9YTQ3 701 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 K7EN84 100 aa13.38□□□□□ -0.27
SCARB1-202ENST00000339570 RAB29O14966 203 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms