RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 CENPMQ9NSP4 180 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 CLEC5AQ9NY25 188 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 NF1P21359 2839 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 RTTNQ86VV8 2226 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 PAGE4O60829 102 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 IFNA1P01562 189 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 IGLV2-14P01704 120 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 SLC25A6P12236 298 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 ZNF20P17024 532 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 OTX2P32243 289 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 MFAP5Q13361 173 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 TESK1Q15569 626 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 TMEM249Q2WGJ8 235 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 TMEM136Q6ZRR5 245 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 KLHDC1Q8N7A1 406 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 OR1B1Q8NGR6 318 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 ZNF596Q8TC21 504 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 C10orf35Q96D05 121 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 NEIL1Q96FI4 390 aaPredicted RBP4.67□□□□□ -1.66
CSDE1-202ENST00000339438 JMJD8Q96S16 334 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 PLEKHJ1Q9NW61 149 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 IGKV1-12A0A0C4DH73 117 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 A0A1B0GX78 115 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 ZNF850A8MQ14 1090 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 IGKV1D-12P01611 117 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 CELA2AP08217 269 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 CTSSP25774 331 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 ATP5G3P48201 142 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 PSMB3P49720 205 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 GUSBP1Q15486 140 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 BRICD5Q6PL45 260 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 OR5D13Q8NGL4 314 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 URB1-AS1Q96HZ7 61 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 TMEM38BQ9NVV0 291 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 ZNF586Q9NXT0 402 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 IL36BQ9NZH7 164 aa4.67□□□□□ -1.66
CSDE1-202ENST00000339438 GJE1A6NN92 205 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 C17orf112F2Z3M2 114 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 BMPR1BO00238 502 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 CDIPTO14735 213 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 TUSC2O75896 110 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 MYBPHQ13203 477 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 IZUMO4Q1ZYL8 232 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 Q6ZS49 121 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 FOXL2NBQ6ZUU3 175 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 ZDHHC23Q8IYP9 409 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 FAM19A2Q8N3H0 131 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 OCC1Q8TAD7 63 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 IMMP1LQ96LU5 166 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 STRADBQ9C0K7 418 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 SLC7A10Q9NS82 523 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 POLR1DQ9Y2S0 133 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 V9GYV3 84 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 IGKV1-6A0A0C4DH72 117 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 CTXND1A0A1B0GTU2 59 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 UTS2O95399 124 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 ZNF823P16415 610 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 CEACAM3P40198 252 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 PTGDSP41222 190 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 FUT6P51993 359 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 SELENOVP59797 346 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 DCAF12Q5T6F0 453 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 HES3Q5TGS1 186 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 OR1K1Q8NGR3 316 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 OR1L1Q8NH94 360 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 NXF5Q9H1B4 397 aaKnown RBP4.66□□□□□ -1.66
CSDE1-202ENST00000339438 SLC25A22Q9H936 323 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 DNAJC13O75165 2243 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 CD5LO43866 347 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 SSTR5P35346 364 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 GABRA2P47869 451 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 C19orf35Q6ZS72 473 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 C2orf91Q6ZV80 131 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 DOK3Q7L591 496 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 BAGE3Q86Y29 109 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 BAGE2Q86Y30 109 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 GAPTQ8N292 157 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 SLC25A40Q8TBP6 338 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 RDH5Q92781 318 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 SAMD10Q9BYL1 202 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 MED29Q9NX70 200 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 ZNF391Q9UJN7 358 aa4.66□□□□□ -1.66
CSDE1-202ENST00000339438 A0A1W2PR80 420 aa4.65□□□□□ -1.66
CSDE1-202ENST00000339438 SLC22A20A6NK97 555 aa4.65□□□□□ -1.66
CSDE1-202ENST00000339438 C11orf94C9JXX5 98 aa4.65□□□□□ -1.66
CSDE1-202ENST00000339438 SIRPB1O00241 398 aa4.65□□□□□ -1.66
CSDE1-202ENST00000339438 SLC17A3O00476 420 aa4.65□□□□□ -1.66
CSDE1-202ENST00000339438 DEGS1O15121 323 aa4.65□□□□□ -1.66
CSDE1-202ENST00000339438 NDUFB4O95168 129 aa4.65□□□□□ -1.66
CSDE1-202ENST00000339438 IFNA5P01569 189 aa4.65□□□□□ -1.66
CSDE1-202ENST00000339438 AMTP48728 403 aa4.65□□□□□ -1.66
CSDE1-202ENST00000339438 CNN3Q15417 329 aaKnown RBP4.65□□□□□ -1.66
CSDE1-202ENST00000339438 PMCHL1Q16048 86 aa4.65□□□□□ -1.66
CSDE1-202ENST00000339438 VWC2Q2TAL6 325 aa4.65□□□□□ -1.66
CSDE1-202ENST00000339438 SAMD13Q5VXD3 122 aa4.65□□□□□ -1.66
CSDE1-202ENST00000339438 TMEM14EPQ6UXP3 125 aa4.65□□□□□ -1.66
CSDE1-202ENST00000339438 CCDC71LQ8N9Z2 235 aa4.65□□□□□ -1.66
CSDE1-202ENST00000339438 ADIPOR1Q96A54 375 aa4.65□□□□□ -1.66
CSDE1-202ENST00000339438 RAB40CQ96S21 281 aa4.65□□□□□ -1.66
CSDE1-202ENST00000339438 SPIN2AQ99865 258 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms