RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 WSB1Q9Y6I7 421 aa13.15□□□□□ -0.3
SFN-201ENST00000339276 TEX13DA0A0J9YY54 714 aaPredicted RBP13.14□□□□□ -0.31
SFN-201ENST00000339276 CRYM-AS1A6NIL9 109 aa13.14□□□□□ -0.31
SFN-201ENST00000339276 CENPXA8MT69 81 aa13.14□□□□□ -0.31
SFN-201ENST00000339276 G3V318 75 aa13.14□□□□□ -0.31
SFN-201ENST00000339276 CNIH1O95406 144 aa13.14□□□□□ -0.31
SFN-201ENST00000339276 KRASP01116 189 aa13.14□□□□□ -0.31
SFN-201ENST00000339276 OR5AC1P0C628 307 aa13.14□□□□□ -0.31
SFN-201ENST00000339276 CD28P10747 220 aa13.14□□□□□ -0.31
SFN-201ENST00000339276 G6PCP35575 357 aa13.14□□□□□ -0.31
SFN-201ENST00000339276 ERVK-16P61578 105 aa13.14□□□□□ -0.31
SFN-201ENST00000339276 RBMS2Q15434 407 aaKnown RBP13.14□□□□□ -0.31
SFN-201ENST00000339276 TNXAQ16473 311 aa13.14□□□□□ -0.31
SFN-201ENST00000339276 SHISA2Q6UWI4 295 aa13.14□□□□□ -0.31
SFN-201ENST00000339276 TMED4Q7Z7H5 227 aa13.14□□□□□ -0.31
SFN-201ENST00000339276 GRPEL2Q8TAA5 225 aa13.14□□□□□ -0.31
SFN-201ENST00000339276 TMEM167AQ8TBQ9 72 aa13.14□□□□□ -0.31
SFN-201ENST00000339276 SLC25A21Q9BQT8 299 aaPredicted RBP13.14□□□□□ -0.31
SFN-201ENST00000339276 AIFM2Q9BRQ8 373 aa13.14□□□□□ -0.31
SFN-201ENST00000339276 TMEM140Q9NV12 185 aa13.14□□□□□ -0.31
SFN-201ENST00000339276 BET1LQ9NYM9 111 aa13.14□□□□□ -0.31
SFN-201ENST00000339276 ZNF580Q9UK33 172 aa13.14□□□□□ -0.31
SFN-201ENST00000339276 ANK2Q01484 3957 aa13.14□□□□□ -0.31
SFN-201ENST00000339276 TRAV3A0A0B4J244 114 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 LYRM1O43325 122 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 FBXO24O75426 580 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 UPK1BO75841 260 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 SERPINE2P07093 398 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 AKR1C4P17516 323 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 VDAC1P21796 283 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 CFHR3Q02985 330 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 ECSCRQ19T08 205 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 C10orf55Q5SWW7 151 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 MMD2Q8IY49 270 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 TBC1D24Q9ULP9 559 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 TNCP24821 2201 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 TRAV41A0A0B4J266 112 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 CREBL2O60519 120 aaPredicted RBP13.13□□□□□ -0.31
SFN-201ENST00000339276 NDUFB6O95139 128 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 IL6RP08887 468 aaPredicted RBP13.13□□□□□ -0.31
SFN-201ENST00000339276 UCP1P25874 307 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 CRIP2P52943 208 aaPredicted RBP13.13□□□□□ -0.31
SFN-201ENST00000339276 SLC35B1P78383 322 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 IFITM3Q01628 133 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 TRIM16LQ309B1 348 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 C19orf54Q5BKX5 351 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 TCTEX1D4Q5JR98 221 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 SGPP2Q8IWX5 399 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 LFNGQ8NES3 379 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 OR4A5Q8NH83 315 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 SGMS2Q8NHU3 365 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 SEC22AQ96IW7 307 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 TMEM222Q9H0R3 208 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 NUBP2Q9Y5Y2 271 aa13.13□□□□□ -0.31
SFN-201ENST00000339276 UPK2O00526 184 aa13.12□□□□□ -0.31
SFN-201ENST00000339276 B3GALNT1O75752 331 aa13.12□□□□□ -0.31
SFN-201ENST00000339276 MYOD1P15172 320 aa13.12□□□□□ -0.31
SFN-201ENST00000339276 PPIFP30405 207 aaKnown RBP13.12□□□□□ -0.31
SFN-201ENST00000339276 RPL8P62917 257 aaKnown RBP13.12□□□□□ -0.31
SFN-201ENST00000339276 SUPT4H1P63272 117 aaKnown RBP13.12□□□□□ -0.31
SFN-201ENST00000339276 OR4X2Q8NGF9 303 aa13.12□□□□□ -0.31
SFN-201ENST00000339276 LHFPL5Q8TAF8 219 aa13.12□□□□□ -0.31
SFN-201ENST00000339276 GLYATL2Q8WU03 294 aa13.12□□□□□ -0.31
SFN-201ENST00000339276 SRSF12Q8WXF0 261 aaKnown RBP13.12□□□□□ -0.31
SFN-201ENST00000339276 CITED2Q99967 270 aaPredicted RBP13.12□□□□□ -0.31
SFN-201ENST00000339276 GON7Q9BXV9 100 aa13.12□□□□□ -0.31
SFN-201ENST00000339276 FLVCR2Q9UPI3 526 aa13.12□□□□□ -0.31
SFN-201ENST00000339276 ACTL6BO94805 426 aa13.11□□□□□ -0.31
SFN-201ENST00000339276 IGKV1-5P01602 117 aa13.11□□□□□ -0.31
SFN-201ENST00000339276 OR9G9P0C7N8 305 aa13.11□□□□□ -0.31
SFN-201ENST00000339276 APELAP0DMC3 54 aa13.11□□□□□ -0.31
SFN-201ENST00000339276 HLA-GP17693 338 aa13.11□□□□□ -0.31
SFN-201ENST00000339276 UNQ5815/PRO19632Q6UWF5 114 aa13.11□□□□□ -0.31
SFN-201ENST00000339276 LCNL1Q6ZST4 164 aa13.11□□□□□ -0.31
SFN-201ENST00000339276 CENPSQ8N2Z9 138 aa13.11□□□□□ -0.31
SFN-201ENST00000339276 GALNT14Q96FL9 552 aa13.11□□□□□ -0.31
SFN-201ENST00000339276 PRR13Q9NZ81 148 aa13.11□□□□□ -0.31
SFN-201ENST00000339276 TET2Q6N021 2002 aaPredicted RBP13.1□□□□□ -0.31
SFN-201ENST00000339276 A0A1W2PN81 502 aa13.1□□□□□ -0.31
SFN-201ENST00000339276 MSGN1A6NI15 193 aa13.1□□□□□ -0.31
SFN-201ENST00000339276 CDS2O95674 445 aa13.1□□□□□ -0.31
SFN-201ENST00000339276 IGHG4P01861 327 aa13.1□□□□□ -0.31
SFN-201ENST00000339276 OPN1MWP04001 364 aa13.1□□□□□ -0.31
SFN-201ENST00000339276 OPN1MW2P0DN77 364 aa13.1□□□□□ -0.31
SFN-201ENST00000339276 OPN1MW3P0DN78 364 aa13.1□□□□□ -0.31
SFN-201ENST00000339276 MAS1LP35410 378 aa13.1□□□□□ -0.31
SFN-201ENST00000339276 CHRNA7P36544 502 aa13.1□□□□□ -0.31
SFN-201ENST00000339276 CD83Q01151 205 aa13.1□□□□□ -0.31
SFN-201ENST00000339276 DHODHQ02127 395 aa13.1□□□□□ -0.31
SFN-201ENST00000339276 TMEM267Q0VDI3 215 aaPredicted RBP13.1□□□□□ -0.31
SFN-201ENST00000339276 ASAH1Q13510 395 aa13.1□□□□□ -0.31
SFN-201ENST00000339276 TMEM187Q14656 261 aa13.1□□□□□ -0.31
SFN-201ENST00000339276 ASPHD1Q5U4P2 390 aa13.1□□□□□ -0.31
SFN-201ENST00000339276 TEX38Q6PEX7 206 aa13.1□□□□□ -0.31
SFN-201ENST00000339276 MINDY2Q8NBR6 621 aa13.1□□□□□ -0.31
SFN-201ENST00000339276 PHB2Q99623 299 aa13.1□□□□□ -0.31
SFN-201ENST00000339276 NSG2Q9Y328 171 aa13.1□□□□□ -0.31
SFN-201ENST00000339276 A0A1B0GW64 132 aa13.09□□□□□ -0.31
SFN-201ENST00000339276 E7EUB6 86 aa13.09□□□□□ -0.31
SFN-201ENST00000339276 SOX15O60248 233 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms