RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 PIFOQ8TCI5 191 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 SOCS4Q8WXH5 440 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 ZDHHC16Q969W1 377 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 JMJD8Q96S16 334 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 PRADC1Q9BSG0 188 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 PRTFDC1Q9NRG1 225 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 DNAJB12Q9NXW2 375 aaKnown RBP3.49□□□□□ -1.85
NEDD4-201ENST00000338963 A0A087X0K7 114 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 H3BML4 177 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 C15orf65H3BRN8 121 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 ASAH2BP0C7U1 165 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 TM4SF1P30408 202 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 FXYD4P59646 89 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 RPL31P62899 125 aaKnown RBP3.49□□□□□ -1.85
NEDD4-201ENST00000338963 ZNF146Q15072 292 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 ZNF141Q15928 474 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 FAM78AQ5JUQ0 283 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 RNF125Q96EQ8 232 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 RARRES3Q9UL19 164 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 RBBP6Q7Z6E9 1792 aaKnown RBP3.49□□□□□ -1.85
NEDD4-201ENST00000338963 SIGLEC1Q9BZZ2 1709 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 NPFFO15130 113 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 PRKNO60260 465 aaPredicted RBP3.49□□□□□ -1.85
NEDD4-201ENST00000338963 RBM11P57052 281 aaKnown RBP3.49□□□□□ -1.85
NEDD4-201ENST00000338963 ZNF726P1Q15940 193 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 LGALS9BQ3B8N2 356 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 LGALS9CQ6DKI2 356 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 Q6P435 159 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 HAPLN4Q86UW8 402 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 INSIG2Q9Y5U4 225 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 MYH10P35580 1976 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 EBLN2Q6P2I7 272 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 ZNF611Q8N823 705 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 OSR1Q8TAX0 266 aaPredicted RBP3.49□□□□□ -1.85
NEDD4-201ENST00000338963 GTSF1Q8WW33 167 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 RNF166Q96A37 237 aaPredicted RBP3.49□□□□□ -1.85
NEDD4-201ENST00000338963 PHLPP1O60346 1717 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 RRN3P1Q2M238 152 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 LINC01555Q8NAE3 123 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 C1orf162Q8NEQ5 155 aaPredicted RBP3.49□□□□□ -1.85
NEDD4-201ENST00000338963 ARPC1AQ92747 370 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 PBOV1Q9GZY1 135 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 SLC25A22Q9H936 323 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 PLEKHA3Q9HB20 300 aa3.49□□□□□ -1.85
NEDD4-201ENST00000338963 PRSS37A4D1T9 235 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 CHEK1O14757 476 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 IGLV3-27P01718 113 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 MT-ATP8P03928 68 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 SCTP09683 121 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 PGFP49763 221 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 HBBP68871 147 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 C9orf153Q5TBE3 101 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 PIP4P1Q86T03 277 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 OR13H1Q8NG92 308 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 ST6GALNAC6Q969X2 333 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 TMEM101Q96IK0 257 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 LINC00615Q96LM1 132 aaPredicted RBP3.48□□□□□ -1.85
NEDD4-201ENST00000338963 FAM234AQ9H0X4 552 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 FBXL15Q9H469 300 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 MDFICQ9P1T7 246 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 PRO0628Q9UI54 55 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 LSM7Q9UK45 103 aaKnown RBP3.48□□□□□ -1.85
NEDD4-201ENST00000338963 HILPDAQ9Y5L2 63 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 PDCD6O75340 191 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 NKX2-2O95096 273 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 GATA2P23769 480 aaPredicted RBP3.48□□□□□ -1.85
NEDD4-201ENST00000338963 RGRP47804 291 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 RPS18P62269 152 aaKnown RBP3.48□□□□□ -1.85
NEDD4-201ENST00000338963 ZNF415Q09FC8 603 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 MS4A18Q3C1V0 323 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 IBA57Q5T440 356 aaKnown RBP3.48□□□□□ -1.85
NEDD4-201ENST00000338963 GAGE2AQ6NT46 116 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 CRIM1Q9NZV1 1036 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 NRAPQ86VF7 1730 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 LINC01619G3V211 115 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 C1orf105O95561 183 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 PRTN3P24158 256 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 PRSS53Q2L4Q9 553 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 HES3Q5TGS1 186 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 OR11H6Q8NGC7 330 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 KIR2DL5BQ8NHK3 375 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 DNAJA3Q96EY1 480 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 IMUPQ9GZP8 106 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 TRAV8-4A0A0B4J246 113 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 A0A1B0GUS0 222 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 MYADML2A6NDP7 307 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 ATP5LO75964 103 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 MPV17P39210 176 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 RPL13AP40429 203 aaKnown RBP3.48□□□□□ -1.85
NEDD4-201ENST00000338963 MALLQ13021 153 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 GUSBP1Q15486 140 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 NMSQ5H8A3 153 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 IER5LQ5T953 404 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 LCN12Q6JVE5 192 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 AMTNQ6UX39 209 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 SPEM1Q8N4L4 309 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 C16orf52Q8NHV5 167 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 MGST2Q99735 147 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 UBE2L5PA0A1B0GUS4 154 aa3.48□□□□□ -1.85
NEDD4-201ENST00000338963 SMIM27A0A1W2PRY6 76 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms