RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 LINC01551Q86U37 167 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 RNASE7Q9H1E1 156 aaKnown RBP11.86□□□□□ -0.51
PCDH8-201ENST00000338862 PLXNB1O43157 2135 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 TRGV5A0A0B4J1U4 118 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 LINC00473A8K010 186 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 DIRC3C9JPN6 131 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 CGAP01215 116 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 RPLP1P05386 114 aaKnown RBP11.85□□□□□ -0.51
PCDH8-201ENST00000338862 FRMD6-AS1P0C7T7 363 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 ABLIM2Q6H8Q1 611 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 ZNF295-AS1Q8N0V1 137 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 TAAR6Q96RI8 345 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 MS4A5Q9H3V2 200 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 F2Z2F3 143 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 KLRC4-KLRK1H3BQV0 150 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 DNPH1O43598 174 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 IRF2P14316 349 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 HINT1P49773 126 aaPredicted RBP11.85□□□□□ -0.51
PCDH8-201ENST00000338862 PSG7Q13046 419 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 SSPNQ14714 243 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 ATP6V1FQ16864 119 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 TMEM183BQ1AE95 376 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 MOB1BQ7L9L4 216 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 STARD4Q96DR4 205 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 TPPP3Q9BW30 176 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 IGHV3-21A0A0B4J1V1 117 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 TRAV1-1A0A0B4J248 108 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 LY6G6EA0A0G2JKS1 128 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 RBFOX2O43251 390 aaKnown RBP eCLIP11.85□□□□□ -0.51
PCDH8-201ENST00000338862 FOXH1O75593 365 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 OR5G3P0C626 314 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 OR9G9P0C7N8 305 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 CDKN1AP38936 164 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 FBXW9Q5XUX1 488 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 C11orf42Q8N5U0 333 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 MRPL37Q9BZE1 423 aaKnown RBP11.85□□□□□ -0.51
PCDH8-201ENST00000338862 U3KQA8 63 aa11.85□□□□□ -0.51
PCDH8-201ENST00000338862 LOC102723996A0A087X1L8 192 aa11.84□□□□□ -0.51
PCDH8-201ENST00000338862 H3BTX0 84 aa11.84□□□□□ -0.51
PCDH8-201ENST00000338862 REG1BP48304 166 aa11.84□□□□□ -0.51
PCDH8-201ENST00000338862 ARRDC1-AS1Q9H2J1 176 aa11.84□□□□□ -0.51
PCDH8-201ENST00000338862 OOEPA6NGQ2 149 aa11.84□□□□□ -0.51
PCDH8-201ENST00000338862 HNRNPA3P51991 378 aaKnown RBP11.84□□□□□ -0.51
PCDH8-201ENST00000338862 HLA-DRB5Q30154 266 aa11.84□□□□□ -0.51
PCDH8-201ENST00000338862 POLR3KQ9Y2Y1 108 aaPredicted RBP11.84□□□□□ -0.51
PCDH8-201ENST00000338862 NPPCP23582 126 aa11.84□□□□□ -0.51
PCDH8-201ENST00000338862 LHX2P50458 406 aa11.84□□□□□ -0.51
PCDH8-201ENST00000338862 Q56UQ5 140 aa11.84□□□□□ -0.51
PCDH8-201ENST00000338862 RNASEKQ6P5S7 137 aaKnown RBP11.84□□□□□ -0.51
PCDH8-201ENST00000338862 TRAT1Q6PIZ9 186 aa11.84□□□□□ -0.51
PCDH8-201ENST00000338862 ST6GALNAC6Q969X2 333 aa11.84□□□□□ -0.51
PCDH8-201ENST00000338862 C11orf1Q9H5F2 150 aa11.84□□□□□ -0.51
PCDH8-201ENST00000338862 ZNF331Q9NQX6 463 aaPredicted RBP11.84□□□□□ -0.51
PCDH8-201ENST00000338862 RNF24Q9Y225 148 aa11.84□□□□□ -0.51
PCDH8-201ENST00000338862 CPAMD8Q8IZJ3 1885 aa11.83□□□□□ -0.52
PCDH8-201ENST00000338862 PDE6DO43924 150 aa11.83□□□□□ -0.52
PCDH8-201ENST00000338862 ZNF83P51522 516 aa11.83□□□□□ -0.52
PCDH8-201ENST00000338862 GBGT1Q8N5D6 347 aa11.83□□□□□ -0.52
PCDH8-201ENST00000338862 KLF14Q8TD94 323 aaPredicted RBP11.83□□□□□ -0.52
PCDH8-201ENST00000338862 BLNKQ8WV28 456 aa11.83□□□□□ -0.52
PCDH8-201ENST00000338862 SLC35D1Q9NTN3 355 aa11.83□□□□□ -0.52
PCDH8-201ENST00000338862 HELTA6NFD8 242 aa11.83□□□□□ -0.52
PCDH8-201ENST00000338862 HSBP1O75506 76 aa11.83□□□□□ -0.52
PCDH8-201ENST00000338862 SRP14P37108 136 aaKnown RBP11.83□□□□□ -0.52
PCDH8-201ENST00000338862 SEPSECSQ9HD40 501 aaKnown RBP11.83□□□□□ -0.52
PCDH8-201ENST00000338862 TMEM242Q9NWH2 141 aa11.83□□□□□ -0.52
PCDH8-201ENST00000338862 TECRQ9NZ01 308 aaKnown RBP11.83□□□□□ -0.52
PCDH8-201ENST00000338862 K7ESF4 209 aa11.83□□□□□ -0.52
PCDH8-201ENST00000338862 SIAH2O43255 324 aa11.83□□□□□ -0.52
PCDH8-201ENST00000338862 DKK1O94907 266 aa11.83□□□□□ -0.52
PCDH8-201ENST00000338862 CLDN18P56856 261 aa11.83□□□□□ -0.52
PCDH8-201ENST00000338862 DAZAP2Q15038 168 aaPredicted RBP11.83□□□□□ -0.52
PCDH8-201ENST00000338862 RPEL1Q2QD12 228 aa11.83□□□□□ -0.52
PCDH8-201ENST00000338862 DCAF10Q5QP82 559 aa11.83□□□□□ -0.52
PCDH8-201ENST00000338862 ZNF703Q9H7S9 590 aaPredicted RBP11.83□□□□□ -0.52
PCDH8-201ENST00000338862 FOXJ2Q9P0K8 574 aa11.83□□□□□ -0.52
PCDH8-201ENST00000338862 CLDN14O95500 239 aa11.82□□□□□ -0.52
PCDH8-201ENST00000338862 NPSP0C0P6 89 aa11.82□□□□□ -0.52
PCDH8-201ENST00000338862 SRIP30626 198 aa11.82□□□□□ -0.52
PCDH8-201ENST00000338862 TIMP3P35625 211 aa11.82□□□□□ -0.52
PCDH8-201ENST00000338862 MMDQ15546 238 aa11.82□□□□□ -0.52
PCDH8-201ENST00000338862 TMEM14EPQ6UXP3 125 aa11.82□□□□□ -0.52
PCDH8-201ENST00000338862 ZNF497Q6ZNH5 498 aa11.82□□□□□ -0.52
PCDH8-201ENST00000338862 MOB3BQ86TA1 216 aa11.82□□□□□ -0.52
PCDH8-201ENST00000338862 WDR86Q86TI4 376 aa11.82□□□□□ -0.52
PCDH8-201ENST00000338862 MMD2Q8IY49 270 aa11.82□□□□□ -0.52
PCDH8-201ENST00000338862 Q8IYB0 196 aa11.82□□□□□ -0.52
PCDH8-201ENST00000338862 ZCCHC14Q8WYQ9 949 aaKnown RBP11.82□□□□□ -0.52
PCDH8-201ENST00000338862 SPSB4Q96A44 273 aa11.82□□□□□ -0.52
PCDH8-201ENST00000338862 TMEM68Q96MH6 324 aa11.82□□□□□ -0.52
PCDH8-201ENST00000338862 TNFSF15O95150 251 aa11.82□□□□□ -0.52
PCDH8-201ENST00000338862 SMIM21Q3B7S5 101 aa11.82□□□□□ -0.52
PCDH8-201ENST00000338862 Q6ZVH6 145 aa11.82□□□□□ -0.52
PCDH8-201ENST00000338862 SAXO1Q8IYX7 474 aa11.82□□□□□ -0.52
PCDH8-201ENST00000338862 ENSAO43768 121 aaKnown RBP11.82□□□□□ -0.52
PCDH8-201ENST00000338862 ARSJQ5FYB0 599 aaPredicted RBP11.82□□□□□ -0.52
PCDH8-201ENST00000338862 PMS2CLQ68D20 193 aa11.82□□□□□ -0.52
PCDH8-201ENST00000338862 Q6P435 159 aa11.82□□□□□ -0.52
PCDH8-201ENST00000338862 C2orf88Q9BSF0 95 aa11.82□□□□□ -0.52
PCDH8-201ENST00000338862 PILRBQ9UKJ0 227 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms